RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 DOT1LQ8TEK3 1739 aa17.38■□□□□ 0.37
SCN3B-205ENST00000528267 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
SCN3B-205ENST00000528267 UPF1Q92900 1129 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCN3B-205ENST00000528267 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
SCN3B-205ENST00000528267 EXOC5O00471 708 aa17.35■□□□□ 0.37
SCN3B-205ENST00000528267 HMOX1P09601 288 aa17.35■□□□□ 0.37
SCN3B-205ENST00000528267 PDE3BQ13370 1112 aa17.35■□□□□ 0.37
SCN3B-205ENST00000528267 PTF1AQ7RTS3 328 aa17.35■□□□□ 0.37
SCN3B-205ENST00000528267 BCL9O00512 1426 aa17.34■□□□□ 0.37
SCN3B-205ENST00000528267 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
SCN3B-205ENST00000528267 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
SCN3B-205ENST00000528267 VIRMAQ69YN4 1812 aaKnown RBP17.34■□□□□ 0.37
SCN3B-205ENST00000528267 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
SCN3B-205ENST00000528267 CYP27B1O15528 508 aa17.33■□□□□ 0.36
SCN3B-205ENST00000528267 ZCRB1Q8TBF4 217 aaKnown RBP17.33■□□□□ 0.36
SCN3B-205ENST00000528267 ITGB4P16144 1822 aa17.31■□□□□ 0.36
SCN3B-205ENST00000528267 U2SURPO15042 1029 aaKnown RBP17.31■□□□□ 0.36
SCN3B-205ENST00000528267 DDX54Q8TDD1 881 aaKnown RBP17.31■□□□□ 0.36
SCN3B-205ENST00000528267 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
SCN3B-205ENST00000528267 PLEKHG2Q9H7P9 1386 aa17.3■□□□□ 0.36
SCN3B-205ENST00000528267 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
SCN3B-205ENST00000528267 BTAF1O14981 1849 aa17.3■□□□□ 0.36
SCN3B-205ENST00000528267 FAM196AQ6ZSG2 479 aa17.29■□□□□ 0.36
SCN3B-205ENST00000528267 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
SCN3B-205ENST00000528267 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
SCN3B-205ENST00000528267 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
SCN3B-205ENST00000528267 TRIM37O94972 964 aa17.28■□□□□ 0.36
SCN3B-205ENST00000528267 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
SCN3B-205ENST00000528267 KCNQ2O43526 872 aa17.27■□□□□ 0.36
SCN3B-205ENST00000528267 ACSBG1Q96GR2 724 aa17.27■□□□□ 0.36
SCN3B-205ENST00000528267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.27■□□□□ 0.36
SCN3B-205ENST00000528267 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.35
SCN3B-205ENST00000528267 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.35
SCN3B-205ENST00000528267 U2AF1L5P0DN76 240 aaPredicted RBP17.26■□□□□ 0.35
SCN3B-205ENST00000528267 PHKG2P15735 406 aa17.26■□□□□ 0.35
SCN3B-205ENST00000528267 U2AF1Q01081 240 aaKnown RBP eCLIP17.26■□□□□ 0.35
SCN3B-205ENST00000528267 PHACTR3Q96KR7 559 aa17.26■□□□□ 0.35
SCN3B-205ENST00000528267 RREB1Q92766 1687 aa17.26■□□□□ 0.35
SCN3B-205ENST00000528267 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
SCN3B-205ENST00000528267 ANP32CO43423 234 aa17.25■□□□□ 0.35
SCN3B-205ENST00000528267 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
SCN3B-205ENST00000528267 DEFB132Q7Z7B7 95 aa17.25■□□□□ 0.35
SCN3B-205ENST00000528267 RGPD3A6NKT7 1758 aaPredicted RBP17.25■□□□□ 0.35
SCN3B-205ENST00000528267 RGPD4Q7Z3J3 1758 aa17.25■□□□□ 0.35
SCN3B-205ENST00000528267 NKX1-1Q15270 411 aaPredicted RBP17.24■□□□□ 0.35
SCN3B-205ENST00000528267 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
SCN3B-205ENST00000528267 SPG7Q9UQ90 795 aa17.24■□□□□ 0.35
SCN3B-205ENST00000528267 NUDCQ9Y266 331 aa17.24■□□□□ 0.35
SCN3B-205ENST00000528267 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
SCN3B-205ENST00000528267 ZNF530Q6P9A1 599 aaPredicted RBP17.23■□□□□ 0.35
SCN3B-205ENST00000528267 PLEKHF1Q96S99 279 aa17.23■□□□□ 0.35
SCN3B-205ENST00000528267 LY75O60449 1722 aa17.21■□□□□ 0.35
SCN3B-205ENST00000528267 NUP188Q5SRE5 1749 aa17.21■□□□□ 0.35
SCN3B-205ENST00000528267 SIPA1L3O60292 1781 aaPredicted RBP17.21■□□□□ 0.35
SCN3B-205ENST00000528267 AMOTQ4VCS5 1084 aa17.21■□□□□ 0.35
SCN3B-205ENST00000528267 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
SCN3B-205ENST00000528267 FCHSD2O94868 740 aa17.2■□□□□ 0.34
SCN3B-205ENST00000528267 PRIM1P49642 420 aaKnown RBP17.2■□□□□ 0.34
SCN3B-205ENST00000528267 BCL11BQ9C0K0 894 aaPredicted RBP17.2■□□□□ 0.34
SCN3B-205ENST00000528267 MRC1P22897 1456 aa17.19■□□□□ 0.34
SCN3B-205ENST00000528267 PAPPAQ13219 1627 aa17.18■□□□□ 0.34
SCN3B-205ENST00000528267 EN1Q05925 392 aaPredicted RBP17.18■□□□□ 0.34
SCN3B-205ENST00000528267 CCDC125Q86Z20 511 aa17.18■□□□□ 0.34
SCN3B-205ENST00000528267 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
SCN3B-205ENST00000528267 APBA3O96018 575 aa17.17■□□□□ 0.34
SCN3B-205ENST00000528267 AKAP4Q5JQC9 854 aa17.17■□□□□ 0.34
SCN3B-205ENST00000528267 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
SCN3B-205ENST00000528267 CAMKK2Q96RR4 588 aa17.17■□□□□ 0.34
SCN3B-205ENST00000528267 LGR6Q9HBX8 967 aa17.17■□□□□ 0.34
SCN3B-205ENST00000528267 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
SCN3B-205ENST00000528267 CCDC146Q8IYE0 955 aa17.16■□□□□ 0.34
SCN3B-205ENST00000528267 PROM2Q8N271 834 aa17.16■□□□□ 0.34
SCN3B-205ENST00000528267 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
SCN3B-205ENST00000528267 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
SCN3B-205ENST00000528267 PIGBQ92521 554 aa17.15■□□□□ 0.34
SCN3B-205ENST00000528267 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
SCN3B-205ENST00000528267 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
SCN3B-205ENST00000528267 C1orf141Q5JVX7 400 aa17.14■□□□□ 0.33
SCN3B-205ENST00000528267 DIEXFQ68CQ4 756 aaKnown RBP17.14■□□□□ 0.33
SCN3B-205ENST00000528267 DCAF5Q96JK2 942 aa17.14■□□□□ 0.33
SCN3B-205ENST00000528267 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
SCN3B-205ENST00000528267 BAG6P46379 1132 aa17.13■□□□□ 0.33
SCN3B-205ENST00000528267 IL17REQ8NFR9 667 aa17.13■□□□□ 0.33
SCN3B-205ENST00000528267 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
SCN3B-205ENST00000528267 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
SCN3B-205ENST00000528267 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
SCN3B-205ENST00000528267 WDR43Q15061 677 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCN3B-205ENST00000528267 CEMIPQ8WUJ3 1361 aa17.12■□□□□ 0.33
SCN3B-205ENST00000528267 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
SCN3B-205ENST00000528267 PLSCR1O15162 318 aa17.11■□□□□ 0.33
SCN3B-205ENST00000528267 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
SCN3B-205ENST00000528267 DCTN1Q14203 1278 aa17.11■□□□□ 0.33
SCN3B-205ENST00000528267 GNAT3A8MTJ3 354 aa17.1■□□□□ 0.33
SCN3B-205ENST00000528267 ERVV-2B6SEH9 535 aa17.1■□□□□ 0.33
SCN3B-205ENST00000528267 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
SCN3B-205ENST00000528267 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
SCN3B-205ENST00000528267 KCNQ4P56696 695 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 MCM10Q7L590 875 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 MIER1Q8N108 512 aa17.09■□□□□ 0.33
SCN3B-205ENST00000528267 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms