RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SSR1P43307 286 aaKnown RBP8.59□□□□□ -1.03
CTNND1-218ENST00000528232 CABP4P57796 275 aa8.59□□□□□ -1.03
CTNND1-218ENST00000528232 SAFBQ15424 915 aaKnown RBP eCLIP8.59□□□□□ -1.03
CTNND1-218ENST00000528232 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
CTNND1-218ENST00000528232 NASPP49321 788 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-218ENST00000528232 C20orf194Q5TEA3 1177 aa8.59□□□□□ -1.03
CTNND1-218ENST00000528232 SSH1Q8WYL5 1049 aa8.59□□□□□ -1.03
CTNND1-218ENST00000528232 NME9Q86XW9 330 aa8.59□□□□□ -1.04
CTNND1-218ENST00000528232 CCDC47Q96A33 483 aaKnown RBP8.59□□□□□ -1.04
CTNND1-218ENST00000528232 ABCC10Q5T3U5 1492 aa8.58□□□□□ -1.04
CTNND1-218ENST00000528232 AEBP1Q8IUX7 1158 aa8.58□□□□□ -1.04
CTNND1-218ENST00000528232 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
CTNND1-218ENST00000528232 TRAPPC8Q9Y2L5 1435 aa8.58□□□□□ -1.04
CTNND1-218ENST00000528232 ANKRD1Q15327 319 aa8.58□□□□□ -1.04
CTNND1-218ENST00000528232 BRPF3Q9ULD4 1205 aa8.58□□□□□ -1.04
CTNND1-218ENST00000528232 TTC21BQ7Z4L5 1316 aa8.58□□□□□ -1.04
CTNND1-218ENST00000528232 UHRF1BP1Q6BDS2 1440 aa8.58□□□□□ -1.04
CTNND1-218ENST00000528232 TEX14Q8IWB6 1497 aa8.58□□□□□ -1.04
CTNND1-218ENST00000528232 BBXQ8WY36 941 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-218ENST00000528232 FBXO31Q5XUX0 539 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-218ENST00000528232 ZNF592Q92610 1267 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 CYP46A1Q9Y6A2 500 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 ZRSR2Q15696 482 aaKnown RBP8.57□□□□□ -1.04
CTNND1-218ENST00000528232 ANKRD20A12PQ8NF67 263 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 CCDC158Q5M9N0 1113 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 TTC39AQ5SRH9 613 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 MNS1Q8NEH6 495 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 GIMAP7Q8NHV1 300 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 INCENPQ9NQS7 918 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 ESPNB1AK53 854 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 NAT10Q9H0A0 1025 aaKnown RBP8.57□□□□□ -1.04
CTNND1-218ENST00000528232 TSPY26PQ9H489 355 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 RAB11FIP3O75154 756 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 TRIM34Q9BYJ4 488 aa8.57□□□□□ -1.04
CTNND1-218ENST00000528232 GTPBP4Q9BZE4 634 aaKnown RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 EMILIN1Q9Y6C2 1016 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 PTPRCP08575 1304 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 WDR33Q9C0J8 1336 aaKnown RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 SRGAP3O43295 1099 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 VPS53Q5VIR6 699 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 MCM10Q7L590 875 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 PUS7Q96PZ0 661 aaKnown RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 RBM28Q9NW13 759 aaKnown RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 FBXO3Q9UK99 471 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 PIK3C2GO75747 1445 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 COL17A1Q9UMD9 1497 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 PRPF40AO75400 957 aaKnown RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 MEX3CQ5U5Q3 659 aaKnown RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 RBM33Q96EV2 1170 aaKnown RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 BRMS1Q9HCU9 246 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 DHX16O60231 1041 aaKnown RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 XBP1P17861 261 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 FOSBP53539 338 aa8.56□□□□□ -1.04
CTNND1-218ENST00000528232 SART3Q15020 963 aaKnown RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.56□□□□□ -1.041e-7■■■□□ 16.3
CTNND1-218ENST00000528232 POLR3AO14802 1390 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-218ENST00000528232 RBM42Q9BTD8 480 aaKnown RBP8.55□□□□□ -1.04
CTNND1-218ENST00000528232 TAF7Q15545 349 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-218ENST00000528232 AMOTQ4VCS5 1084 aa8.55□□□□□ -1.04
CTNND1-218ENST00000528232 ZNF396Q96N95 335 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-218ENST00000528232 THUMPD2Q9BTF0 503 aaKnown RBP8.55□□□□□ -1.04
CTNND1-218ENST00000528232 TOM1L2Q6ZVM7 507 aa8.55□□□□□ -1.04
CTNND1-218ENST00000528232 AACSQ86V21 672 aa8.55□□□□□ -1.04
CTNND1-218ENST00000528232 ZSCAN31Q96LW9 406 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-218ENST00000528232 RUFY1Q96T51 708 aa8.55□□□□□ -1.04
CTNND1-218ENST00000528232 UQCRHLA0A096LP55 91 aa8.55□□□□□ -1.04
CTNND1-218ENST00000528232 CLGNO14967 610 aa8.55□□□□□ -1.04
CTNND1-218ENST00000528232 IPO7O95373 1038 aaKnown RBP8.55□□□□□ -1.04
CTNND1-218ENST00000528232 UQCRHP07919 91 aa8.55□□□□□ -1.04
CTNND1-218ENST00000528232 TNRQ92752 1358 aa8.55□□□□□ -1.04
CTNND1-218ENST00000528232 CCDC27Q2M243 656 aa8.55□□□□□ -1.04
CTNND1-218ENST00000528232 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 GOLGA6L7A0A1B0GV03 622 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 TRIM27P14373 513 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 MYL6BP14649 208 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 STRN4Q9NRL3 753 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 ARHGEF5Q12774 1597 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 CEP170Q5SW79 1584 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 TARBP1Q13395 1621 aaKnown RBP8.54□□□□□ -1.04
CTNND1-218ENST00000528232 CNNM1Q9NRU3 951 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 EIF3JO75822 258 aaKnown RBP8.54□□□□□ -1.04
CTNND1-218ENST00000528232 KIAA0754O94854 1291 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 MCM5P33992 734 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 ZSCAN25Q6NSZ9 544 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 OLFM4Q6UX06 510 aa8.54□□□□□ -1.04
CTNND1-218ENST00000528232 MSH5O43196 834 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 MX1P20591 662 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 HOMER1Q86YM7 354 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 KIF1BPQ96EK5 621 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 SIL1Q9H173 461 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 MAP4K4O95819 1239 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-218ENST00000528232 ZSCAN30Q86W11 494 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 ATP7AQ04656 1500 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 MCM4P33991 863 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 KRT32Q14532 448 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 PDRG1Q9NUG6 133 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 PHF8Q9UPP1 1060 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 UHRF1BP1LA0JNW5 1464 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 DYNC1I1O14576 645 aa8.53□□□□□ -1.04
CTNND1-218ENST00000528232 TIGD1Q96MW7 591 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms