RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 MTFR1LQ9H019 292 aa36■■■■□ 3.35
TRIM3-206ENST00000528227 INSRP06213 1382 aa36■■■■□ 3.35
TRIM3-206ENST00000528227 NSD3Q9BZ95 1437 aa36■■■■□ 3.35
TRIM3-206ENST00000528227 ZNF827Q17R98 1081 aa35.99■■■■□ 3.35
TRIM3-206ENST00000528227 PCGF6Q9BYE7 350 aa35.99■■■■□ 3.35
TRIM3-206ENST00000528227 KIF24Q5T7B8 1368 aa35.99■■■■□ 3.35
TRIM3-206ENST00000528227 PRIM1P49642 420 aaKnown RBP35.98■■■■□ 3.35
TRIM3-206ENST00000528227 HSP90AB2PQ58FF8 381 aa35.98■■■■□ 3.35
TRIM3-206ENST00000528227 USHBP1Q8N6Y0 703 aa35.98■■■■□ 3.35
TRIM3-206ENST00000528227 FLT4P35916 1363 aa35.98■■■■□ 3.35
TRIM3-206ENST00000528227 SLC27A3Q5K4L6 730 aa35.97■■■■□ 3.35
TRIM3-206ENST00000528227 SYTL4Q96C24 671 aaPredicted RBP35.97■■■■□ 3.35
TRIM3-206ENST00000528227 CGNL1Q0VF96 1302 aa35.97■■■■□ 3.35
TRIM3-206ENST00000528227 NSD2O96028 1365 aa35.96■■■■□ 3.35
TRIM3-206ENST00000528227 SGIP1Q9BQI5 828 aa35.94■■■■□ 3.34
TRIM3-206ENST00000528227 RAPGEF4Q8WZA2 1011 aa35.93■■■■□ 3.34
TRIM3-206ENST00000528227 LY75O60449 1722 aa35.93■■■■□ 3.34
TRIM3-206ENST00000528227 DCAF8L1A6NGE4 600 aa35.92■■■■□ 3.34
TRIM3-206ENST00000528227 AKT1S1Q96B36 256 aa35.92■■■■□ 3.34
TRIM3-206ENST00000528227 QSER1Q2KHR3 1735 aa35.91■■■■□ 3.34
TRIM3-206ENST00000528227 TATP17735 454 aaPredicted RBP35.89■■■■□ 3.34
TRIM3-206ENST00000528227 EMILIN1Q9Y6C2 1016 aa35.89■■■■□ 3.34
TRIM3-206ENST00000528227 ANKRD26Q9UPS8 1709 aa35.88■■■■□ 3.33
TRIM3-206ENST00000528227 YY1P25490 414 aa35.87■■■■□ 3.33
TRIM3-206ENST00000528227 FHDC1Q9C0D6 1143 aaPredicted RBP35.87■■■■□ 3.33
TRIM3-206ENST00000528227 KCNQ4P56696 695 aa35.86■■■■□ 3.33
TRIM3-206ENST00000528227 SYT17Q9BSW7 474 aa35.84■■■■□ 3.33
TRIM3-206ENST00000528227 PCDH11XQ9BZA7 1347 aa35.83■■■■□ 3.33
TRIM3-206ENST00000528227 PCDH11YQ9BZA8 1340 aa35.83■■■■□ 3.33
TRIM3-206ENST00000528227 TUBGCP6Q96RT7 1819 aa35.83■■■■□ 3.33
TRIM3-206ENST00000528227 PNPLA7Q6ZV29 1317 aa35.82■■■■□ 3.32
TRIM3-206ENST00000528227 ARXQ96QS3 562 aa35.81■■■■□ 3.32
TRIM3-206ENST00000528227 NCAPD2Q15021 1401 aa35.81■■■■□ 3.32
TRIM3-206ENST00000528227 SLC16A10Q8TF71 515 aa35.79■■■■□ 3.32
TRIM3-206ENST00000528227 CCNL1Q9UK58 526 aaPredicted RBP35.79■■■■□ 3.32
TRIM3-206ENST00000528227 PKD1L3Q7Z443 1732 aa35.79■■■■□ 3.32
TRIM3-206ENST00000528227 MAP2P11137 1827 aaKnown RBP35.78■■■■□ 3.32
TRIM3-206ENST00000528227 PPM1GO15355 546 aaPredicted RBP35.78■■■■□ 3.32
TRIM3-206ENST00000528227 TFCP2L1Q9NZI6 479 aa35.78■■■■□ 3.32
TRIM3-206ENST00000528227 POLR3GLQ9BT43 218 aa35.77■■■■□ 3.32
TRIM3-206ENST00000528227 WASHC2AQ641Q2 1341 aa35.77■■■■□ 3.32
TRIM3-206ENST00000528227 COL24A1Q17RW2 1714 aa35.77■■■■□ 3.32
TRIM3-206ENST00000528227 CYP27B1O15528 508 aa35.76■■■■□ 3.32
TRIM3-206ENST00000528227 MAP3K5Q99683 1374 aa35.76■■■■□ 3.31
TRIM3-206ENST00000528227 TOGARAM1Q9Y4F4 1720 aa35.74■■■■□ 3.31
TRIM3-206ENST00000528227 EIF4G2P78344 907 aaKnown RBP eCLIP35.73■■■■□ 3.31
TRIM3-206ENST00000528227 POLKQ9UBT6 870 aa35.72■■■■□ 3.31
TRIM3-206ENST00000528227 HSPA5P11021 654 aaKnown RBP35.71■■■■□ 3.31
TRIM3-206ENST00000528227 ITGB4P16144 1822 aa35.69■■■■□ 3.3
TRIM3-206ENST00000528227 C5P01031 1676 aa35.69■■■■□ 3.3
TRIM3-206ENST00000528227 EYA1Q99502 592 aa35.69■■■■□ 3.3
TRIM3-206ENST00000528227 MPRIPQ6WCQ1 1025 aa35.68■■■■□ 3.3
TRIM3-206ENST00000528227 PALLDQ8WX93 1383 aa35.67■■■■□ 3.3
TRIM3-206ENST00000528227 POLD1P28340 1107 aa35.67■■■■□ 3.3
TRIM3-206ENST00000528227 CCER1Q8TC90 406 aaPredicted RBP35.65■■■■□ 3.3
TRIM3-206ENST00000528227 SPG7Q9UQ90 795 aa35.65■■■■□ 3.3
TRIM3-206ENST00000528227 NKX1-1Q15270 411 aaPredicted RBP35.64■■■■□ 3.3
TRIM3-206ENST00000528227 TAF1LQ8IZX4 1826 aa35.64■■■■□ 3.3
TRIM3-206ENST00000528227 TNNT2P45379 298 aaPredicted RBP35.63■■■■□ 3.29
TRIM3-206ENST00000528227 COL23A1Q86Y22 540 aaPredicted RBP35.62■■■■□ 3.29
TRIM3-206ENST00000528227 PANK3Q9H999 370 aa35.62■■■■□ 3.29
TRIM3-206ENST00000528227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.62■■■■□ 3.29
TRIM3-206ENST00000528227 EIF4A2Q14240 407 aaKnown RBP35.6■■■■□ 3.29
TRIM3-206ENST00000528227 SMARCC1Q92922 1105 aaPredicted RBP35.59■■■■□ 3.29
TRIM3-206ENST00000528227 MSH5O43196 834 aa35.58■■■■□ 3.29
TRIM3-206ENST00000528227 HMGB2P26583 209 aaKnown RBP35.58■■■■□ 3.29
TRIM3-206ENST00000528227 KLHL34Q8N239 644 aa35.58■■■■□ 3.29
TRIM3-206ENST00000528227 PIGBQ92521 554 aa35.58■■■■□ 3.29
TRIM3-206ENST00000528227 C4BP0C0L5 1744 aa35.55■■■■□ 3.28
TRIM3-206ENST00000528227 UTRNP46939 3433 aa35.54■■■■□ 3.28
TRIM3-206ENST00000528227 PLEKHG2Q9H7P9 1386 aa35.53■■■■□ 3.28
TRIM3-206ENST00000528227 PHKG2P15735 406 aa35.53■■■■□ 3.28
TRIM3-206ENST00000528227 IFNL2Q8IZJ0 200 aa35.53■■■■□ 3.28
TRIM3-206ENST00000528227 CHD4Q14839 1912 aa35.53■■■■□ 3.28
TRIM3-206ENST00000528227 IGSF1Q8N6C5 1336 aa35.52■■■■□ 3.28
TRIM3-206ENST00000528227 FLAD1Q8NFF5 587 aa35.51■■■■□ 3.28
TRIM3-206ENST00000528227 TMOD3Q9NYL9 352 aa35.5■■■■□ 3.27
TRIM3-206ENST00000528227 GPR162Q16538 588 aa35.49■■■■□ 3.27
TRIM3-206ENST00000528227 MSL1Q68DK7 614 aa35.49■■■■□ 3.27
TRIM3-206ENST00000528227 NLGN2Q8NFZ4 835 aa35.49■■■■□ 3.27
TRIM3-206ENST00000528227 AK7Q96M32 723 aa35.47■■■■□ 3.27
TRIM3-206ENST00000528227 UBR3Q6ZT12 1888 aa35.46■■■■□ 3.27
TRIM3-206ENST00000528227 LOC102724428A0A0B4J2F2 783 aa35.45■■■■□ 3.27
TRIM3-206ENST00000528227 SIK1P57059 783 aa35.45■■■■□ 3.27
TRIM3-206ENST00000528227 ZNF784Q8NCA9 323 aaPredicted RBP35.45■■■■□ 3.27
TRIM3-206ENST00000528227 MORC1Q86VD1 984 aa35.44■■■■□ 3.26
TRIM3-206ENST00000528227 AMIGO3Q86WK7 504 aa35.44■■■■□ 3.26
TRIM3-206ENST00000528227 ASAP1Q9ULH1 1129 aa35.44■■■■□ 3.26
TRIM3-206ENST00000528227 LINC00116Q8NCU8 138 aa35.41■■■■□ 3.26
TRIM3-206ENST00000528227 PELP1Q8IZL8 1130 aaKnown RBP35.4■■■■□ 3.26
TRIM3-206ENST00000528227 KNSTRNQ9Y448 316 aa35.4■■■■□ 3.26
TRIM3-206ENST00000528227 ATG3Q9NT62 314 aa35.39■■■■□ 3.26
TRIM3-206ENST00000528227 PHF14O94880 888 aa35.38■■■■□ 3.25
TRIM3-206ENST00000528227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.37■■■■□ 3.25
TRIM3-206ENST00000528227 ITPK1Q13572 414 aa35.37■■■■□ 3.25
TRIM3-206ENST00000528227 PLEKHO1Q53GL0 409 aaPredicted RBP35.37■■■■□ 3.25
TRIM3-206ENST00000528227 SMIM5Q71RC9 77 aa35.37■■■■□ 3.25
TRIM3-206ENST00000528227 SSFA2P28290 1259 aa35.36■■■■□ 3.25
TRIM3-206ENST00000528227 ATP6V1AP38606 617 aa35.36■■■■□ 3.25
TRIM3-206ENST00000528227 ERVV-2B6SEH9 535 aa35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms