RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 PANK3Q9H999 370 aa31.8■■■□□ 2.68
PKP3-206ENST00000528036 PPM1GO15355 546 aaPredicted RBP31.78■■■□□ 2.68
PKP3-206ENST00000528036 HMGB2P26583 209 aaKnown RBP31.78■■■□□ 2.68
PKP3-206ENST00000528036 SLC15A2Q16348 729 aa31.78■■■□□ 2.68
PKP3-206ENST00000528036 SLC27A3Q5K4L6 730 aa31.78■■■□□ 2.68
PKP3-206ENST00000528036 ANO8Q9HCE9 1232 aaPredicted RBP31.78■■■□□ 2.68
PKP3-206ENST00000528036 MEGF6O75095 1541 aa31.78■■■□□ 2.68
PKP3-206ENST00000528036 USHBP1Q8N6Y0 703 aa31.76■■■□□ 2.67
PKP3-206ENST00000528036 POLKQ9UBT6 870 aa31.76■■■□□ 2.67
PKP3-206ENST00000528036 PCDH11XQ9BZA7 1347 aa31.75■■■□□ 2.67
PKP3-206ENST00000528036 PCDH11YQ9BZA8 1340 aa31.75■■■□□ 2.67
PKP3-206ENST00000528036 PRIM1P49642 420 aaKnown RBP31.74■■■□□ 2.67
PKP3-206ENST00000528036 SYTL4Q96C24 671 aaPredicted RBP31.73■■■□□ 2.67
PKP3-206ENST00000528036 PPP1R1BQ9UD71 204 aaPredicted RBP31.71■■■□□ 2.67
PKP3-206ENST00000528036 KNSTRNQ9Y448 316 aa31.71■■■□□ 2.67
PKP3-206ENST00000528036 NCAPD2Q15021 1401 aa31.69■■■□□ 2.66
PKP3-206ENST00000528036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.69■■■□□ 2.66
PKP3-206ENST00000528036 KAT6BQ8WYB5 2073 aa31.69■■■□□ 2.66
PKP3-206ENST00000528036 PLEKHG2Q9H7P9 1386 aa31.68■■■□□ 2.66
PKP3-206ENST00000528036 RGPD2P0DJD1 1756 aa31.68■■■□□ 2.66
PKP3-206ENST00000528036 BTAF1O14981 1849 aa31.68■■■□□ 2.66
PKP3-206ENST00000528036 SPG7Q9UQ90 795 aa31.68■■■□□ 2.66
PKP3-206ENST00000528036 ANKRD26Q9UPS8 1709 aa31.67■■■□□ 2.66
PKP3-206ENST00000528036 TNNT2P45379 298 aaPredicted RBP31.65■■■□□ 2.66
PKP3-206ENST00000528036 MORC1Q86VD1 984 aa31.65■■■□□ 2.66
PKP3-206ENST00000528036 EYA1Q99502 592 aa31.65■■■□□ 2.66
PKP3-206ENST00000528036 MTFR1LQ9H019 292 aa31.63■■■□□ 2.65
PKP3-206ENST00000528036 LRRC4BQ9NT99 713 aa31.62■■■□□ 2.65
PKP3-206ENST00000528036 MAP2P11137 1827 aaKnown RBP31.61■■■□□ 2.65
PKP3-206ENST00000528036 KIF7Q2M1P5 1343 aa31.6■■■□□ 2.65
PKP3-206ENST00000528036 CYP27B1O15528 508 aa31.6■■■□□ 2.65
PKP3-206ENST00000528036 EIF4A2Q14240 407 aaKnown RBP31.6■■■□□ 2.65
PKP3-206ENST00000528036 NKX1-1Q15270 411 aaPredicted RBP31.6■■■□□ 2.65
PKP3-206ENST00000528036 SHANK3Q9BYB0 1731 aa31.6■■■□□ 2.65
PKP3-206ENST00000528036 CASZ1Q86V15 1759 aa31.59■■■□□ 2.65
PKP3-206ENST00000528036 ZBTB7AO95365 584 aa31.58■■■□□ 2.65
PKP3-206ENST00000528036 SLC16A10Q8TF71 515 aa31.58■■■□□ 2.65
PKP3-206ENST00000528036 AKT1S1Q96B36 256 aa31.58■■■□□ 2.65
PKP3-206ENST00000528036 PAPPAQ13219 1627 aa31.57■■■□□ 2.64
PKP3-206ENST00000528036 DCAF8L1A6NGE4 600 aa31.57■■■□□ 2.64
PKP3-206ENST00000528036 SMARCC1Q92922 1105 aaPredicted RBP31.57■■■□□ 2.64
PKP3-206ENST00000528036 CCNL1Q9UK58 526 aaPredicted RBP31.57■■■□□ 2.64
PKP3-206ENST00000528036 DOT1LQ8TEK3 1739 aa31.57■■■□□ 2.64
PKP3-206ENST00000528036 PDGFDQ9GZP0 370 aaPredicted RBP31.55■■■□□ 2.64
PKP3-206ENST00000528036 IGSF1Q8N6C5 1336 aa31.54■■■□□ 2.64
PKP3-206ENST00000528036 ZNF827Q17R98 1081 aa31.54■■■□□ 2.64
PKP3-206ENST00000528036 IFNL2Q8IZJ0 200 aa31.54■■■□□ 2.64
PKP3-206ENST00000528036 AMER1Q5JTC6 1135 aaPredicted RBP31.53■■■□□ 2.64
PKP3-206ENST00000528036 TFCP2L1Q9NZI6 479 aa31.53■■■□□ 2.64
PKP3-206ENST00000528036 PTGER2P43116 358 aa31.52■■■□□ 2.64
PKP3-206ENST00000528036 MPRIPQ6WCQ1 1025 aa31.52■■■□□ 2.64
PKP3-206ENST00000528036 ATF5Q9Y2D1 282 aaPredicted RBP31.52■■■□□ 2.64
PKP3-206ENST00000528036 PKD1L3Q7Z443 1732 aa31.52■■■□□ 2.64
PKP3-206ENST00000528036 HSP90AB1P08238 724 aaKnown RBP31.49■■■□□ 2.63
PKP3-206ENST00000528036 PHKG2P15735 406 aa31.48■■■□□ 2.63
PKP3-206ENST00000528036 AMOTQ4VCS5 1084 aa31.48■■■□□ 2.63
PKP3-206ENST00000528036 PLEKHO1Q53GL0 409 aaPredicted RBP31.48■■■□□ 2.63
PKP3-206ENST00000528036 LY75O60449 1722 aa31.47■■■□□ 2.63
PKP3-206ENST00000528036 PALLDQ8WX93 1383 aa31.47■■■□□ 2.63
PKP3-206ENST00000528036 PER1O15534 1290 aaPredicted RBP31.45■■■□□ 2.63
PKP3-206ENST00000528036 SGIP1Q9BQI5 828 aa31.45■■■□□ 2.63
PKP3-206ENST00000528036 TMOD3Q9NYL9 352 aa31.45■■■□□ 2.63
PKP3-206ENST00000528036 FLAD1Q8NFF5 587 aa31.44■■■□□ 2.62
PKP3-206ENST00000528036 PIGBQ92521 554 aa31.44■■■□□ 2.62
PKP3-206ENST00000528036 PNPLA7Q6ZV29 1317 aa31.43■■■□□ 2.62
PKP3-206ENST00000528036 POLD1P28340 1107 aa31.42■■■□□ 2.62
PKP3-206ENST00000528036 KCNQ4P56696 695 aa31.42■■■□□ 2.62
PKP3-206ENST00000528036 ARXQ96QS3 562 aa31.42■■■□□ 2.62
PKP3-206ENST00000528036 NPC1L1Q9UHC9 1359 aa31.42■■■□□ 2.62
PKP3-206ENST00000528036 QSER1Q2KHR3 1735 aa31.41■■■□□ 2.62
PKP3-206ENST00000528036 ERVV-2B6SEH9 535 aa31.4■■■□□ 2.62
PKP3-206ENST00000528036 DCAF5Q96JK2 942 aa31.4■■■□□ 2.62
PKP3-206ENST00000528036 IL13P35225 146 aa31.38■■■□□ 2.61
PKP3-206ENST00000528036 MAP3K5Q99683 1374 aa31.37■■■□□ 2.61
PKP3-206ENST00000528036 MTHFSP49914 203 aa31.36■■■□□ 2.61
PKP3-206ENST00000528036 SYT17Q9BSW7 474 aa31.36■■■□□ 2.61
PKP3-206ENST00000528036 KDRP35968 1356 aa31.35■■■□□ 2.61
PKP3-206ENST00000528036 C1orf141Q5JVX7 400 aa31.35■■■□□ 2.61
PKP3-206ENST00000528036 SULT6B1Q6IMI4 303 aa31.35■■■□□ 2.61
PKP3-206ENST00000528036 ZNF530Q6P9A1 599 aaPredicted RBP31.35■■■□□ 2.61
PKP3-206ENST00000528036 FHDC1Q9C0D6 1143 aaPredicted RBP31.35■■■□□ 2.61
PKP3-206ENST00000528036 LOC102724428A0A0B4J2F2 783 aa31.34■■■□□ 2.61
PKP3-206ENST00000528036 SIK1P57059 783 aa31.34■■■□□ 2.61
PKP3-206ENST00000528036 MSH5O43196 834 aa31.32■■■□□ 2.6
PKP3-206ENST00000528036 CC2D1BQ5T0F9 858 aaKnown RBP31.32■■■□□ 2.6
PKP3-206ENST00000528036 AK7Q96M32 723 aa31.32■■■□□ 2.6
PKP3-206ENST00000528036 TOGARAM1Q9Y4F4 1720 aa31.32■■■□□ 2.6
PKP3-206ENST00000528036 ITGB4P16144 1822 aa31.31■■■□□ 2.6
PKP3-206ENST00000528036 COL23A1Q86Y22 540 aaPredicted RBP31.3■■■□□ 2.6
PKP3-206ENST00000528036 AEBP1Q8IUX7 1158 aa31.29■■■□□ 2.6
PKP3-206ENST00000528036 ASAP1Q9ULH1 1129 aa31.29■■■□□ 2.6
PKP3-206ENST00000528036 DIAPH1O60610 1272 aaKnown RBP31.28■■■□□ 2.6
PKP3-206ENST00000528036 CABP4P57796 275 aa31.28■■■□□ 2.6
PKP3-206ENST00000528036 ATG3Q9NT62 314 aa31.27■■■□□ 2.6
PKP3-206ENST00000528036 C5P01031 1676 aa31.26■■■□□ 2.6
PKP3-206ENST00000528036 ATP6V1AP38606 617 aa31.25■■■□□ 2.59
PKP3-206ENST00000528036 SSFA2P28290 1259 aa31.24■■■□□ 2.59
PKP3-206ENST00000528036 AKAP4Q5JQC9 854 aa31.24■■■□□ 2.59
PKP3-206ENST00000528036 COL24A1Q17RW2 1714 aa31.21■■■□□ 2.59
PKP3-206ENST00000528036 C4BP0C0L5 1744 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms