RNA–Protein interactions for RNA: ENST00000528010.1

TM9SF1-205, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-205ENST00000528010 PRIM1P49642 420 aaKnown RBP21.77■■□□□ 1.08
TM9SF1-205ENST00000528010 AKT1S1Q96B36 256 aa21.77■■□□□ 1.08
TM9SF1-205ENST00000528010 ARXQ96QS3 562 aa21.77■■□□□ 1.08
TM9SF1-205ENST00000528010 SLC16A10Q8TF71 515 aa21.76■■□□□ 1.07
TM9SF1-205ENST00000528010 MAP3K5Q99683 1374 aa21.75■■□□□ 1.07
TM9SF1-205ENST00000528010 KAT6BQ8WYB5 2073 aa21.75■■□□□ 1.07
TM9SF1-205ENST00000528010 NBPF6Q5VWK0 638 aa21.75■■□□□ 1.07
TM9SF1-205ENST00000528010 NBPF4Q96M43 638 aa21.75■■□□□ 1.07
TM9SF1-205ENST00000528010 KIF24Q5T7B8 1368 aa21.74■■□□□ 1.07
TM9SF1-205ENST00000528010 RAPGEF4Q8WZA2 1011 aa21.74■■□□□ 1.07
TM9SF1-205ENST00000528010 DOT1LQ8TEK3 1739 aa21.74■■□□□ 1.07
TM9SF1-205ENST00000528010 SHANK3Q9BYB0 1731 aa21.74■■□□□ 1.07
TM9SF1-205ENST00000528010 NSD2O96028 1365 aa21.74■■□□□ 1.07
TM9SF1-205ENST00000528010 RGPD2P0DJD1 1756 aa21.73■■□□□ 1.07
TM9SF1-205ENST00000528010 INSRP06213 1382 aa21.73■■□□□ 1.07
TM9SF1-205ENST00000528010 FLT4P35916 1363 aa21.73■■□□□ 1.07
TM9SF1-205ENST00000528010 QSER1Q2KHR3 1735 aa21.72■■□□□ 1.07
TM9SF1-205ENST00000528010 TFCP2L1Q9NZI6 479 aa21.71■■□□□ 1.07
TM9SF1-205ENST00000528010 PNPLA7Q6ZV29 1317 aa21.71■■□□□ 1.07
TM9SF1-205ENST00000528010 LY75O60449 1722 aa21.7■■□□□ 1.06
TM9SF1-205ENST00000528010 TATP17735 454 aaPredicted RBP21.7■■□□□ 1.06
TM9SF1-205ENST00000528010 USHBP1Q8N6Y0 703 aa21.7■■□□□ 1.06
TM9SF1-205ENST00000528010 KIF20BQ96Q89 1820 aa21.7■■□□□ 1.06
TM9SF1-205ENST00000528010 POLD1P28340 1107 aa21.69■■□□□ 1.06
TM9SF1-205ENST00000528010 HSP90AB2PQ58FF8 381 aa21.69■■□□□ 1.06
TM9SF1-205ENST00000528010 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
TM9SF1-205ENST00000528010 CCNL1Q9UK58 526 aaPredicted RBP21.68■■□□□ 1.06
TM9SF1-205ENST00000528010 PCDH11XQ9BZA7 1347 aa21.68■■□□□ 1.06
TM9SF1-205ENST00000528010 PCDH11YQ9BZA8 1340 aa21.68■■□□□ 1.06
TM9SF1-205ENST00000528010 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
TM9SF1-205ENST00000528010 KCNQ4P56696 695 aa21.67■■□□□ 1.06
TM9SF1-205ENST00000528010 NSD3Q9BZ95 1437 aa21.65■■□□□ 1.06
TM9SF1-205ENST00000528010 CARD14Q9BXL6 1004 aa21.65■■□□□ 1.06
TM9SF1-205ENST00000528010 COL24A1Q17RW2 1714 aa21.64■■□□□ 1.06
TM9SF1-205ENST00000528010 EMILIN1Q9Y6C2 1016 aa21.63■■□□□ 1.05
TM9SF1-205ENST00000528010 TUBGCP6Q96RT7 1819 aa21.63■■□□□ 1.05
TM9SF1-205ENST00000528010 CLSPNQ9HAW4 1339 aa21.62■■□□□ 1.05
TM9SF1-205ENST00000528010 ZNF784Q8NCA9 323 aaPredicted RBP21.62■■□□□ 1.05
TM9SF1-205ENST00000528010 KLHL34Q8N239 644 aa21.61■■□□□ 1.05
TM9SF1-205ENST00000528010 GPR162Q16538 588 aa21.6■■□□□ 1.05
TM9SF1-205ENST00000528010 NCAPD2Q15021 1401 aa21.6■■□□□ 1.05
TM9SF1-205ENST00000528010 CYP27B1O15528 508 aa21.59■■□□□ 1.05
TM9SF1-205ENST00000528010 PALLDQ8WX93 1383 aa21.59■■□□□ 1.05
TM9SF1-205ENST00000528010 MSH5O43196 834 aa21.58■■□□□ 1.05
TM9SF1-205ENST00000528010 COL23A1Q86Y22 540 aaPredicted RBP21.58■■□□□ 1.05
TM9SF1-205ENST00000528010 WASHC2AQ641Q2 1341 aa21.57■■□□□ 1.04
TM9SF1-205ENST00000528010 PPM1GO15355 546 aaPredicted RBP21.57■■□□□ 1.04
TM9SF1-205ENST00000528010 MPRIPQ6WCQ1 1025 aa21.57■■□□□ 1.04
TM9SF1-205ENST00000528010 FLAD1Q8NFF5 587 aa21.57■■□□□ 1.04
TM9SF1-205ENST00000528010 SMARCC1Q92922 1105 aaPredicted RBP21.57■■□□□ 1.04
TM9SF1-205ENST00000528010 PKD1L3Q7Z443 1732 aa21.57■■□□□ 1.04
TM9SF1-205ENST00000528010 ANKRD26Q9UPS8 1709 aa21.57■■□□□ 1.04
TM9SF1-205ENST00000528010 CHD4Q14839 1912 aa21.57■■□□□ 1.04
TM9SF1-205ENST00000528010 SPG7Q9UQ90 795 aa21.56■■□□□ 1.04
TM9SF1-205ENST00000528010 C5P01031 1676 aa21.56■■□□□ 1.04
TM9SF1-205ENST00000528010 NKX1-1Q15270 411 aaPredicted RBP21.55■■□□□ 1.04
TM9SF1-205ENST00000528010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.54■■□□□ 1.04
TM9SF1-205ENST00000528010 NLGN2Q8NFZ4 835 aa21.53■■□□□ 1.04
TM9SF1-205ENST00000528010 TOGARAM1Q9Y4F4 1720 aa21.52■■□□□ 1.04
TM9SF1-205ENST00000528010 PELP1Q8IZL8 1130 aaKnown RBP21.52■■□□□ 1.04
TM9SF1-205ENST00000528010 EYA1Q99502 592 aa21.52■■□□□ 1.04
TM9SF1-205ENST00000528010 POLKQ9UBT6 870 aa21.52■■□□□ 1.04
TM9SF1-205ENST00000528010 UTRNP46939 3433 aa21.52■■□□□ 1.04
TM9SF1-205ENST00000528010 PLEKHG2Q9H7P9 1386 aa21.5■■□□□ 1.03
TM9SF1-205ENST00000528010 MSL1Q68DK7 614 aa21.5■■□□□ 1.03
TM9SF1-205ENST00000528010 PIGBQ92521 554 aa21.5■■□□□ 1.03
TM9SF1-205ENST00000528010 AK7Q96M32 723 aa21.5■■□□□ 1.03
TM9SF1-205ENST00000528010 TAF1LQ8IZX4 1826 aa21.5■■□□□ 1.03
TM9SF1-205ENST00000528010 POLR3GLQ9BT43 218 aa21.49■■□□□ 1.03
TM9SF1-205ENST00000528010 ITGB4P16144 1822 aa21.49■■□□□ 1.03
TM9SF1-205ENST00000528010 C4BP0C0L5 1744 aa21.49■■□□□ 1.03
TM9SF1-205ENST00000528010 GRIN3BO60391 1043 aa21.48■■□□□ 1.03
TM9SF1-205ENST00000528010 IFNL2Q8IZJ0 200 aa21.48■■□□□ 1.03
TM9SF1-205ENST00000528010 PCGF6Q9BYE7 350 aa21.48■■□□□ 1.03
TM9SF1-205ENST00000528010 MAP2P11137 1827 aaKnown RBP21.48■■□□□ 1.03
TM9SF1-205ENST00000528010 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
TM9SF1-205ENST00000528010 CD2APQ9Y5K6 639 aa21.47■■□□□ 1.03
TM9SF1-205ENST00000528010 PHKG2P15735 406 aa21.46■■□□□ 1.03
TM9SF1-205ENST00000528010 EIF4G2P78344 907 aaKnown RBP eCLIP21.46■■□□□ 1.03
TM9SF1-205ENST00000528010 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
TM9SF1-205ENST00000528010 SIK1P57059 783 aa21.45■■□□□ 1.02
TM9SF1-205ENST00000528010 EIF4A2Q14240 407 aaKnown RBP21.45■■□□□ 1.02
TM9SF1-205ENST00000528010 SSFA2P28290 1259 aa21.44■■□□□ 1.02
TM9SF1-205ENST00000528010 TNNT2P45379 298 aaPredicted RBP21.44■■□□□ 1.02
TM9SF1-205ENST00000528010 YBX3P16989 372 aaKnown RBP eCLIP21.43■■□□□ 1.028e-7■■□□□ 12.2
TM9SF1-205ENST00000528010 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.42■■□□□ 1.02
TM9SF1-205ENST00000528010 PHF14O94880 888 aa21.42■■□□□ 1.02
TM9SF1-205ENST00000528010 C1QTNF8P60827 252 aa21.42■■□□□ 1.02
TM9SF1-205ENST00000528010 IGSF1Q8N6C5 1336 aa21.42■■□□□ 1.02
TM9SF1-205ENST00000528010 HSPA5P11021 654 aaKnown RBP21.41■■□□□ 1.02
TM9SF1-205ENST00000528010 AMIGO3Q86WK7 504 aa21.41■■□□□ 1.02
TM9SF1-205ENST00000528010 LINC00116Q8NCU8 138 aa21.41■■□□□ 1.02
TM9SF1-205ENST00000528010 ASAP1Q9ULH1 1129 aa21.41■■□□□ 1.02
TM9SF1-205ENST00000528010 UBR3Q6ZT12 1888 aa21.41■■□□□ 1.02
TM9SF1-205ENST00000528010 PANK3Q9H999 370 aa21.4■■□□□ 1.02
TM9SF1-205ENST00000528010 HSP90AB1P08238 724 aaKnown RBP21.39■■□□□ 1.01
TM9SF1-205ENST00000528010 ATP6V1AP38606 617 aa21.39■■□□□ 1.01
TM9SF1-205ENST00000528010 GIGYF1O75420 1035 aaPredicted RBP21.38■■□□□ 1.01
TM9SF1-205ENST00000528010 ITPK1Q13572 414 aa21.38■■□□□ 1.01
TM9SF1-205ENST00000528010 ATG3Q9NT62 314 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms