RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PRIM1P49642 420 aaKnown RBP19.56■□□□□ 0.72
CAPN1-212ENST00000527887 POLR3GLQ9BT43 218 aa19.56■□□□□ 0.72
CAPN1-212ENST00000527887 MEGF6O75095 1541 aa19.56■□□□□ 0.72
CAPN1-212ENST00000527887 MYOM1P52179 1685 aa19.56■□□□□ 0.72
CAPN1-212ENST00000527887 EMILIN1Q9Y6C2 1016 aa19.55■□□□□ 0.72
CAPN1-212ENST00000527887 KIF20BQ96Q89 1820 aa19.54■□□□□ 0.72
CAPN1-212ENST00000527887 USHBP1Q8N6Y0 703 aa19.54■□□□□ 0.72
CAPN1-212ENST00000527887 SYTL4Q96C24 671 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-212ENST00000527887 PCDH11XQ9BZA7 1347 aa19.53■□□□□ 0.72
CAPN1-212ENST00000527887 PCDH11YQ9BZA8 1340 aa19.53■□□□□ 0.72
CAPN1-212ENST00000527887 PPM1GO15355 546 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-212ENST00000527887 MTFR1LQ9H019 292 aa19.52■□□□□ 0.72
CAPN1-212ENST00000527887 PANK3Q9H999 370 aa19.52■□□□□ 0.72
CAPN1-212ENST00000527887 LRRC4BQ9NT99 713 aa19.52■□□□□ 0.72
CAPN1-212ENST00000527887 POLKQ9UBT6 870 aa19.52■□□□□ 0.72
CAPN1-212ENST00000527887 ZBTB7AO95365 584 aa19.51■□□□□ 0.71
CAPN1-212ENST00000527887 PDGFDQ9GZP0 370 aaPredicted RBP19.51■□□□□ 0.71
CAPN1-212ENST00000527887 NSD2O96028 1365 aa19.51■□□□□ 0.71
CAPN1-212ENST00000527887 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
CAPN1-212ENST00000527887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.71
CAPN1-212ENST00000527887 NCAPD2Q15021 1401 aa19.5■□□□□ 0.71
CAPN1-212ENST00000527887 BTAF1O14981 1849 aa19.49■□□□□ 0.71
CAPN1-212ENST00000527887 PTGER2P43116 358 aa19.49■□□□□ 0.71
CAPN1-212ENST00000527887 SLC16A10Q8TF71 515 aa19.49■□□□□ 0.71
CAPN1-212ENST00000527887 AKT1S1Q96B36 256 aa19.49■□□□□ 0.71
CAPN1-212ENST00000527887 SPG7Q9UQ90 795 aa19.49■□□□□ 0.71
CAPN1-212ENST00000527887 CASZ1Q86V15 1759 aa19.49■□□□□ 0.71
CAPN1-212ENST00000527887 PLEKHG2Q9H7P9 1386 aa19.47■□□□□ 0.71
CAPN1-212ENST00000527887 EYA1Q99502 592 aa19.47■□□□□ 0.71
CAPN1-212ENST00000527887 ATF5Q9Y2D1 282 aaPredicted RBP19.47■□□□□ 0.71
CAPN1-212ENST00000527887 CYP27B1O15528 508 aa19.46■□□□□ 0.71
CAPN1-212ENST00000527887 NKX1-1Q15270 411 aaPredicted RBP19.46■□□□□ 0.71
CAPN1-212ENST00000527887 ZNF827Q17R98 1081 aa19.46■□□□□ 0.71
CAPN1-212ENST00000527887 PAPPAQ13219 1627 aa19.46■□□□□ 0.71
CAPN1-212ENST00000527887 RGPD2P0DJD1 1756 aa19.45■□□□□ 0.7
CAPN1-212ENST00000527887 CCNL1Q9UK58 526 aaPredicted RBP19.45■□□□□ 0.7
CAPN1-212ENST00000527887 SGIP1Q9BQI5 828 aa19.44■□□□□ 0.7
CAPN1-212ENST00000527887 TFCP2L1Q9NZI6 479 aa19.44■□□□□ 0.7
CAPN1-212ENST00000527887 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
CAPN1-212ENST00000527887 KAT6BQ8WYB5 2073 aa19.44■□□□□ 0.7
CAPN1-212ENST00000527887 TNNT2P45379 298 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-212ENST00000527887 EIF4A2Q14240 407 aaKnown RBP19.43■□□□□ 0.7
CAPN1-212ENST00000527887 MORC1Q86VD1 984 aa19.43■□□□□ 0.7
CAPN1-212ENST00000527887 SMARCC1Q92922 1105 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-212ENST00000527887 SHANK3Q9BYB0 1731 aa19.42■□□□□ 0.7
CAPN1-212ENST00000527887 ANKRD26Q9UPS8 1709 aa19.42■□□□□ 0.7
CAPN1-212ENST00000527887 MPRIPQ6WCQ1 1025 aa19.41■□□□□ 0.7
CAPN1-212ENST00000527887 IFNL2Q8IZJ0 200 aa19.41■□□□□ 0.7
CAPN1-212ENST00000527887 ARXQ96QS3 562 aa19.41■□□□□ 0.7
CAPN1-212ENST00000527887 DOT1LQ8TEK3 1739 aa19.4■□□□□ 0.7
CAPN1-212ENST00000527887 POLD1P28340 1107 aa19.39■□□□□ 0.69
CAPN1-212ENST00000527887 SYT17Q9BSW7 474 aa19.39■□□□□ 0.69
CAPN1-212ENST00000527887 PNPLA7Q6ZV29 1317 aa19.39■□□□□ 0.69
CAPN1-212ENST00000527887 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.69
CAPN1-212ENST00000527887 KCNQ4P56696 695 aa19.38■□□□□ 0.69
CAPN1-212ENST00000527887 FLAD1Q8NFF5 587 aa19.38■□□□□ 0.69
CAPN1-212ENST00000527887 FHDC1Q9C0D6 1143 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-212ENST00000527887 MAP2P11137 1827 aaKnown RBP19.37■□□□□ 0.69
CAPN1-212ENST00000527887 PALLDQ8WX93 1383 aa19.37■□□□□ 0.69
CAPN1-212ENST00000527887 MAP3K5Q99683 1374 aa19.37■□□□□ 0.69
CAPN1-212ENST00000527887 PHKG2P15735 406 aa19.37■□□□□ 0.69
CAPN1-212ENST00000527887 PIGBQ92521 554 aa19.37■□□□□ 0.69
CAPN1-212ENST00000527887 KIF7Q2M1P5 1343 aa19.36■□□□□ 0.69
CAPN1-212ENST00000527887 HSP90AB1P08238 724 aaKnown RBP19.36■□□□□ 0.69
CAPN1-212ENST00000527887 AMOTQ4VCS5 1084 aa19.36■□□□□ 0.69
CAPN1-212ENST00000527887 LY75O60449 1722 aa19.36■□□□□ 0.69
CAPN1-212ENST00000527887 PKD1L3Q7Z443 1732 aa19.36■□□□□ 0.69
CAPN1-212ENST00000527887 PLEKHO1Q53GL0 409 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-212ENST00000527887 AMER1Q5JTC6 1135 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-212ENST00000527887 TMOD3Q9NYL9 352 aa19.35■□□□□ 0.69
CAPN1-212ENST00000527887 QSER1Q2KHR3 1735 aa19.34■□□□□ 0.69
CAPN1-212ENST00000527887 YY1P25490 414 aa19.33■□□□□ 0.68
CAPN1-212ENST00000527887 ERVV-2B6SEH9 535 aa19.32■□□□□ 0.68
CAPN1-212ENST00000527887 DCAF5Q96JK2 942 aa19.32■□□□□ 0.68
CAPN1-212ENST00000527887 LOC102724428A0A0B4J2F2 783 aa19.31■□□□□ 0.68
CAPN1-212ENST00000527887 PER1O15534 1290 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-212ENST00000527887 MSH5O43196 834 aa19.31■□□□□ 0.68
CAPN1-212ENST00000527887 SIK1P57059 783 aa19.31■□□□□ 0.68
CAPN1-212ENST00000527887 COL23A1Q86Y22 540 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-212ENST00000527887 ZEB1P37275 1124 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-212ENST00000527887 IL13P35225 146 aa19.29■□□□□ 0.68
CAPN1-212ENST00000527887 AK7Q96M32 723 aa19.29■□□□□ 0.68
CAPN1-212ENST00000527887 SULT6B1Q6IMI4 303 aa19.27■□□□□ 0.68
CAPN1-212ENST00000527887 ZNF530Q6P9A1 599 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-212ENST00000527887 ASAP1Q9ULH1 1129 aa19.27■□□□□ 0.68
CAPN1-212ENST00000527887 KDRP35968 1356 aa19.27■□□□□ 0.68
CAPN1-212ENST00000527887 SSFA2P28290 1259 aa19.26■□□□□ 0.67
CAPN1-212ENST00000527887 C1orf141Q5JVX7 400 aa19.26■□□□□ 0.67
CAPN1-212ENST00000527887 ATG3Q9NT62 314 aa19.26■□□□□ 0.67
CAPN1-212ENST00000527887 NPC1L1Q9UHC9 1359 aa19.26■□□□□ 0.67
CAPN1-212ENST00000527887 TOGARAM1Q9Y4F4 1720 aa19.25■□□□□ 0.67
CAPN1-212ENST00000527887 ATP6V1AP38606 617 aa19.25■□□□□ 0.67
CAPN1-212ENST00000527887 MTHFSP49914 203 aa19.25■□□□□ 0.67
CAPN1-212ENST00000527887 COL24A1Q17RW2 1714 aa19.24■□□□□ 0.67
CAPN1-212ENST00000527887 CABP4P57796 275 aa19.23■□□□□ 0.67
CAPN1-212ENST00000527887 AEBP1Q8IUX7 1158 aa19.23■□□□□ 0.67
CAPN1-212ENST00000527887 C5P01031 1676 aa19.23■□□□□ 0.67
CAPN1-212ENST00000527887 UTRNP46939 3433 aa19.23■□□□□ 0.67
CAPN1-212ENST00000527887 ITGB4P16144 1822 aa19.23■□□□□ 0.67
CAPN1-212ENST00000527887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms