RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 CFAP53Q96M91 514 aa22.28■■□□□ 1.16
SSH3-205ENST00000527821 SHANK3Q9BYB0 1731 aa22.26■■□□□ 1.15
SSH3-205ENST00000527821 SBF2Q86WG5 1849 aa22.26■■□□□ 1.15
SSH3-205ENST00000527821 TNS1Q9HBL0 1735 aaKnown RBP22.26■■□□□ 1.15
SSH3-205ENST00000527821 BCL9O00512 1426 aa22.25■■□□□ 1.15
SSH3-205ENST00000527821 SULT6B1Q6IMI4 303 aa22.25■■□□□ 1.15
SSH3-205ENST00000527821 COL3A1P02461 1466 aaPredicted RBP22.24■■□□□ 1.15
SSH3-205ENST00000527821 BAG6P46379 1132 aa22.24■■□□□ 1.15
SSH3-205ENST00000527821 RALBP1Q15311 655 aa22.24■■□□□ 1.15
SSH3-205ENST00000527821 DEFB132Q7Z7B7 95 aa22.24■■□□□ 1.15
SSH3-205ENST00000527821 SPG7Q9UQ90 795 aa22.24■■□□□ 1.15
SSH3-205ENST00000527821 PCDH11XQ9BZA7 1347 aa22.24■■□□□ 1.15
SSH3-205ENST00000527821 PCDH11YQ9BZA8 1340 aa22.24■■□□□ 1.15
SSH3-205ENST00000527821 PKD1L3Q7Z443 1732 aa22.23■■□□□ 1.15
SSH3-205ENST00000527821 AEBP1Q8IUX7 1158 aa22.23■■□□□ 1.15
SSH3-205ENST00000527821 U2SURPO15042 1029 aaKnown RBP22.22■■□□□ 1.15
SSH3-205ENST00000527821 APBA3O96018 575 aa22.22■■□□□ 1.15
SSH3-205ENST00000527821 ACSBG1Q96GR2 724 aa22.22■■□□□ 1.15
SSH3-205ENST00000527821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.21■■□□□ 1.15
SSH3-205ENST00000527821 HMOX1P09601 288 aa22.2■■□□□ 1.14
SSH3-205ENST00000527821 BCL11BQ9C0K0 894 aaPredicted RBP22.2■■□□□ 1.14
SSH3-205ENST00000527821 KDRP35968 1356 aa22.2■■□□□ 1.14
SSH3-205ENST00000527821 KAT6BQ8WYB5 2073 aa22.19■■□□□ 1.14
SSH3-205ENST00000527821 NUDCQ9Y266 331 aa22.19■■□□□ 1.14
SSH3-205ENST00000527821 NHSQ6T4R5 1651 aa22.19■■□□□ 1.14
SSH3-205ENST00000527821 PLEKHG2Q9H7P9 1386 aa22.18■■□□□ 1.14
SSH3-205ENST00000527821 CYP27B1O15528 508 aa22.18■■□□□ 1.14
SSH3-205ENST00000527821 KCNQ2O43526 872 aa22.18■■□□□ 1.14
SSH3-205ENST00000527821 EN1Q05925 392 aaPredicted RBP22.18■■□□□ 1.14
SSH3-205ENST00000527821 PLEKHO1Q53GL0 409 aaPredicted RBP22.18■■□□□ 1.14
SSH3-205ENST00000527821 PTF1AQ7RTS3 328 aa22.17■■□□□ 1.14
SSH3-205ENST00000527821 DOT1LQ8TEK3 1739 aa22.17■■□□□ 1.14
SSH3-205ENST00000527821 MYBBP1AQ9BQG0 1328 aaKnown RBP22.16■■□□□ 1.14
SSH3-205ENST00000527821 AMOTQ4VCS5 1084 aa22.16■■□□□ 1.14
SSH3-205ENST00000527821 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
SSH3-205ENST00000527821 SYTL4Q96C24 671 aaPredicted RBP22.15■■□□□ 1.14
SSH3-205ENST00000527821 PRIM1P49642 420 aaKnown RBP22.14■■□□□ 1.13
SSH3-205ENST00000527821 PRKRIP1Q9H875 184 aaPredicted RBP22.14■■□□□ 1.13
SSH3-205ENST00000527821 PHKG2P15735 406 aa22.13■■□□□ 1.13
SSH3-205ENST00000527821 EZH2Q15910 746 aaKnown RBP22.13■■□□□ 1.13
SSH3-205ENST00000527821 ZNF530Q6P9A1 599 aaPredicted RBP22.13■■□□□ 1.13
SSH3-205ENST00000527821 U2AF1L5P0DN76 240 aaPredicted RBP22.12■■□□□ 1.13
SSH3-205ENST00000527821 U2AF1Q01081 240 aaKnown RBP eCLIP22.12■■□□□ 1.13
SSH3-205ENST00000527821 CAMKK2Q96RR4 588 aa22.12■■□□□ 1.13
SSH3-205ENST00000527821 BTAF1O14981 1849 aa22.11■■□□□ 1.13
SSH3-205ENST00000527821 C1orf141Q5JVX7 400 aa22.11■■□□□ 1.13
SSH3-205ENST00000527821 PLSCR1O15162 318 aa22.1■■□□□ 1.13
SSH3-205ENST00000527821 NKX1-1Q15270 411 aaPredicted RBP22.1■■□□□ 1.13
SSH3-205ENST00000527821 TOGARAM1Q9Y4F4 1720 aa22.09■■□□□ 1.13
SSH3-205ENST00000527821 RGPD3A6NKT7 1758 aaPredicted RBP22.08■■□□□ 1.13
SSH3-205ENST00000527821 RGPD4Q7Z3J3 1758 aa22.08■■□□□ 1.13
SSH3-205ENST00000527821 HSP90AB1P08238 724 aaKnown RBP22.08■■□□□ 1.13
SSH3-205ENST00000527821 PRKAR2BP31323 418 aa22.07■■□□□ 1.12
SSH3-205ENST00000527821 RSPH6AQ9H0K4 717 aa22.07■■□□□ 1.12
SSH3-205ENST00000527821 ITGB4P16144 1822 aa22.06■■□□□ 1.12
SSH3-205ENST00000527821 MPRIPQ6WCQ1 1025 aa22.06■■□□□ 1.12
SSH3-205ENST00000527821 RREB1Q92766 1687 aa22.06■■□□□ 1.12
SSH3-205ENST00000527821 FCHSD2O94868 740 aa22.05■■□□□ 1.12
SSH3-205ENST00000527821 MTHFSDQ2M296 383 aaKnown RBP22.05■■□□□ 1.12
SSH3-205ENST00000527821 DCAF5Q96JK2 942 aa22.05■■□□□ 1.12
SSH3-205ENST00000527821 ANP32CO43423 234 aa22.04■■□□□ 1.12
SSH3-205ENST00000527821 AKAP4Q5JQC9 854 aa22.04■■□□□ 1.12
SSH3-205ENST00000527821 TMOD3Q9NYL9 352 aa22.03■■□□□ 1.12
SSH3-205ENST00000527821 TXNRD1Q16881 649 aa22.02■■□□□ 1.12
SSH3-205ENST00000527821 GAS2L2Q8NHY3 880 aa22.02■■□□□ 1.12
SSH3-205ENST00000527821 NUP188Q5SRE5 1749 aa22.02■■□□□ 1.12
SSH3-205ENST00000527821 KDM6AO15550 1401 aaPredicted RBP22.01■■□□□ 1.11
SSH3-205ENST00000527821 ERVV-2B6SEH9 535 aa22■■□□□ 1.11
SSH3-205ENST00000527821 NEFMP07197 916 aa22■■□□□ 1.11
SSH3-205ENST00000527821 PROM2Q8N271 834 aa22■■□□□ 1.11
SSH3-205ENST00000527821 PIGBQ92521 554 aa22■■□□□ 1.11
SSH3-205ENST00000527821 PHACTR3Q96KR7 559 aa22■■□□□ 1.11
SSH3-205ENST00000527821 CABP4P57796 275 aa21.99■■□□□ 1.11
SSH3-205ENST00000527821 SCN11AQ9UI33 1791 aa21.99■■□□□ 1.11
SSH3-205ENST00000527821 WDR43Q15061 677 aaKnown RBP eCLIP21.98■■□□□ 1.11
SSH3-205ENST00000527821 NBPF14Q5TI25 921 aa21.98■■□□□ 1.11
SSH3-205ENST00000527821 PNNQ9H307 717 aaKnown RBP21.98■■□□□ 1.11
SSH3-205ENST00000527821 MAP3K5Q99683 1374 aa21.97■■□□□ 1.11
SSH3-205ENST00000527821 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
SSH3-205ENST00000527821 GNAT3A8MTJ3 354 aa21.96■■□□□ 1.11
SSH3-205ENST00000527821 RNMTO43148 476 aaKnown RBP21.96■■□□□ 1.11
SSH3-205ENST00000527821 SMARCC1Q92922 1105 aaPredicted RBP21.96■■□□□ 1.11
SSH3-205ENST00000527821 LGR6Q9HBX8 967 aa21.96■■□□□ 1.11
SSH3-205ENST00000527821 LY75O60449 1722 aa21.96■■□□□ 1.11
SSH3-205ENST00000527821 SLC27A3Q5K4L6 730 aa21.95■■□□□ 1.1
SSH3-205ENST00000527821 PALLDQ8WX93 1383 aa21.95■■□□□ 1.1
SSH3-205ENST00000527821 NFATC2IPQ8NCF5 419 aa21.94■■□□□ 1.1
SSH3-205ENST00000527821 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
SSH3-205ENST00000527821 PSDA5PKW4 1024 aaPredicted RBP21.93■■□□□ 1.1
SSH3-205ENST00000527821 R3HDM1Q15032 1099 aaKnown RBP21.93■■□□□ 1.1
SSH3-205ENST00000527821 PLEKHF1Q96S99 279 aa21.93■■□□□ 1.1
SSH3-205ENST00000527821 LRRC4BQ9NT99 713 aa21.93■■□□□ 1.1
SSH3-205ENST00000527821 CCNL1Q9UK58 526 aaPredicted RBP21.93■■□□□ 1.1
SSH3-205ENST00000527821 ASAP1Q9ULH1 1129 aa21.93■■□□□ 1.1
SSH3-205ENST00000527821 KCNQ4P56696 695 aa21.92■■□□□ 1.1
SSH3-205ENST00000527821 SLC52A2Q9HAB3 445 aa21.92■■□□□ 1.1
SSH3-205ENST00000527821 ADAMTS7Q9UKP4 1686 aa21.91■■□□□ 1.1
SSH3-205ENST00000527821 RTF1Q92541 710 aaKnown RBP21.91■■□□□ 1.1
SSH3-205ENST00000527821 ATG3Q9NT62 314 aa21.91■■□□□ 1.1
SSH3-205ENST00000527821 IL17REQ8NFR9 667 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms