RNA–Protein interactions for RNA: ENST00000527656.1

LRP4-202, Transcript of LDL receptor related protein 4, humanhuman

TSL 2

Gene LRP4, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-202ENST00000527656 PANK3Q9H999 370 aa21.53■■□□□ 1.04
LRP4-202ENST00000527656 SMG6Q86US8 1419 aaKnown RBP21.52■■□□□ 1.04
LRP4-202ENST00000527656 KIF7Q2M1P5 1343 aa21.52■■□□□ 1.03
LRP4-202ENST00000527656 PROM2Q8N271 834 aa21.51■■□□□ 1.03
LRP4-202ENST00000527656 ACSBG1Q96GR2 724 aa21.51■■□□□ 1.03
LRP4-202ENST00000527656 LY75O60449 1722 aa21.51■■□□□ 1.03
LRP4-202ENST00000527656 ITGB4P16144 1822 aa21.5■■□□□ 1.03
LRP4-202ENST00000527656 PLSCR1O15162 318 aa21.5■■□□□ 1.03
LRP4-202ENST00000527656 ANO8Q9HCE9 1232 aaPredicted RBP21.5■■□□□ 1.03
LRP4-202ENST00000527656 TUBGCP6Q96RT7 1819 aa21.5■■□□□ 1.03
LRP4-202ENST00000527656 POLKQ9UBT6 870 aa21.47■■□□□ 1.03
LRP4-202ENST00000527656 NSD2O96028 1365 aa21.47■■□□□ 1.03
LRP4-202ENST00000527656 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
LRP4-202ENST00000527656 DDX54Q8TDD1 881 aaKnown RBP21.45■■□□□ 1.02
LRP4-202ENST00000527656 WASHC2AQ641Q2 1341 aa21.45■■□□□ 1.02
LRP4-202ENST00000527656 PPM1GO15355 546 aaPredicted RBP21.44■■□□□ 1.02
LRP4-202ENST00000527656 TXNRD1Q16881 649 aa21.42■■□□□ 1.02
LRP4-202ENST00000527656 ZCRB1Q8TBF4 217 aaKnown RBP21.42■■□□□ 1.02
LRP4-202ENST00000527656 QSER1Q2KHR3 1735 aa21.41■■□□□ 1.02
LRP4-202ENST00000527656 AMER1Q5JTC6 1135 aaPredicted RBP21.4■■□□□ 1.02
LRP4-202ENST00000527656 TAF1LQ8IZX4 1826 aa21.4■■□□□ 1.02
LRP4-202ENST00000527656 EYA1Q99502 592 aa21.39■■□□□ 1.01
LRP4-202ENST00000527656 PDGFDQ9GZP0 370 aaPredicted RBP21.39■■□□□ 1.01
LRP4-202ENST00000527656 EIF4A2Q14240 407 aaKnown RBP21.38■■□□□ 1.01
LRP4-202ENST00000527656 RAPGEF4Q8WZA2 1011 aa21.38■■□□□ 1.01
LRP4-202ENST00000527656 VIRMAQ69YN4 1812 aaKnown RBP21.37■■□□□ 1.01
LRP4-202ENST00000527656 TATP17735 454 aaPredicted RBP21.37■■□□□ 1.01
LRP4-202ENST00000527656 NBPF14Q5TI25 921 aa21.37■■□□□ 1.01
LRP4-202ENST00000527656 CYP27B1O15528 508 aa21.36■■□□□ 1.01
LRP4-202ENST00000527656 LRRC4BQ9NT99 713 aa21.36■■□□□ 1.01
LRP4-202ENST00000527656 C5P01031 1676 aa21.36■■□□□ 1.01
LRP4-202ENST00000527656 PER1O15534 1290 aaPredicted RBP21.35■■□□□ 1.01
LRP4-202ENST00000527656 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
LRP4-202ENST00000527656 PCDH11XQ9BZA7 1347 aa21.34■■□□□ 1.01
LRP4-202ENST00000527656 PCDH11YQ9BZA8 1340 aa21.34■■□□□ 1.01
LRP4-202ENST00000527656 IGSF1Q8N6C5 1336 aa21.33■■□□□ 1.01
LRP4-202ENST00000527656 KNSTRNQ9Y448 316 aa21.33■■□□□ 1.01
LRP4-202ENST00000527656 ZNF827Q17R98 1081 aa21.32■■□□□ 1
LRP4-202ENST00000527656 MORC1Q86VD1 984 aa21.32■■□□□ 1
LRP4-202ENST00000527656 SYTL4Q96C24 671 aaPredicted RBP21.32■■□□□ 1
LRP4-202ENST00000527656 COL24A1Q17RW2 1714 aa21.32■■□□□ 1
LRP4-202ENST00000527656 KCNQ4P56696 695 aa21.31■■□□□ 1
LRP4-202ENST00000527656 SLC15A2Q16348 729 aa21.3■■□□□ 1
LRP4-202ENST00000527656 COL3A1P02461 1466 aaPredicted RBP21.27■■□□□ 1
LRP4-202ENST00000527656 AEBP1Q8IUX7 1158 aa21.27■■□□□ 1
LRP4-202ENST00000527656 STK32BQ9NY57 414 aa21.27■■□□□ 1
LRP4-202ENST00000527656 SCN11AQ9UI33 1791 aa21.26■□□□□ 0.99
LRP4-202ENST00000527656 CC2D1BQ5T0F9 858 aaKnown RBP21.26■□□□□ 0.99
LRP4-202ENST00000527656 NKX1-1Q15270 411 aaPredicted RBP21.25■□□□□ 0.99
LRP4-202ENST00000527656 UBR3Q6ZT12 1888 aa21.25■□□□□ 0.99
LRP4-202ENST00000527656 AKT1S1Q96B36 256 aa21.25■□□□□ 0.99
LRP4-202ENST00000527656 PLEKHG2Q9H7P9 1386 aa21.24■□□□□ 0.99
LRP4-202ENST00000527656 ZBTB7AO95365 584 aa21.24■□□□□ 0.99
LRP4-202ENST00000527656 C4BP0C0L5 1744 aa21.24■□□□□ 0.99
LRP4-202ENST00000527656 KDRP35968 1356 aa21.23■□□□□ 0.99
LRP4-202ENST00000527656 NPC1L1Q9UHC9 1359 aa21.23■□□□□ 0.99
LRP4-202ENST00000527656 PHKG2P15735 406 aa21.23■□□□□ 0.99
LRP4-202ENST00000527656 IL13P35225 146 aa21.23■□□□□ 0.99
LRP4-202ENST00000527656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.23■□□□□ 0.99
LRP4-202ENST00000527656 KDM6AO15550 1401 aaPredicted RBP21.22■□□□□ 0.99
LRP4-202ENST00000527656 SLC27A3Q5K4L6 730 aa21.22■□□□□ 0.99
LRP4-202ENST00000527656 SPON1Q9HCB6 807 aa21.22■□□□□ 0.99
LRP4-202ENST00000527656 SPG7Q9UQ90 795 aa21.22■□□□□ 0.99
LRP4-202ENST00000527656 UTRNP46939 3433 aa21.22■□□□□ 0.99
LRP4-202ENST00000527656 PALLDQ8WX93 1383 aa21.22■□□□□ 0.99
LRP4-202ENST00000527656 PTGER2P43116 358 aa21.21■□□□□ 0.99
LRP4-202ENST00000527656 MPRIPQ6WCQ1 1025 aa21.21■□□□□ 0.99
LRP4-202ENST00000527656 MTHFSP49914 203 aa21.2■□□□□ 0.98
LRP4-202ENST00000527656 PNPLA7Q6ZV29 1317 aa21.2■□□□□ 0.98
LRP4-202ENST00000527656 COL5A3P25940 1745 aaPredicted RBP21.2■□□□□ 0.98
LRP4-202ENST00000527656 PIGBQ92521 554 aa21.19■□□□□ 0.98
LRP4-202ENST00000527656 SGIP1Q9BQI5 828 aa21.19■□□□□ 0.98
LRP4-202ENST00000527656 CCNL1Q9UK58 526 aaPredicted RBP21.19■□□□□ 0.98
LRP4-202ENST00000527656 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
LRP4-202ENST00000527656 ATF5Q9Y2D1 282 aaPredicted RBP21.18■□□□□ 0.98
LRP4-202ENST00000527656 ADAMTS7Q9UKP4 1686 aa21.18■□□□□ 0.98
LRP4-202ENST00000527656 SULT6B1Q6IMI4 303 aa21.17■□□□□ 0.98
LRP4-202ENST00000527656 IFNL2Q8IZJ0 200 aa21.17■□□□□ 0.98
LRP4-202ENST00000527656 ZNF831Q5JPB2 1677 aa21.17■□□□□ 0.98
LRP4-202ENST00000527656 MYH14Q7Z406 1995 aaKnown RBP21.14■□□□□ 0.98
LRP4-202ENST00000527656 AMIGO3Q86WK7 504 aa21.14■□□□□ 0.97
LRP4-202ENST00000527656 MTFR1LQ9H019 292 aa21.14■□□□□ 0.97
LRP4-202ENST00000527656 GOLGB1Q14789 3259 aaKnown RBP21.13■□□□□ 0.97
LRP4-202ENST00000527656 TJP1Q07157 1748 aa21.13■□□□□ 0.97
LRP4-202ENST00000527656 ASAP1Q9ULH1 1129 aa21.13■□□□□ 0.97
LRP4-202ENST00000527656 ZNF530Q6P9A1 599 aaPredicted RBP21.12■□□□□ 0.97
LRP4-202ENST00000527656 CICQ96RK0 1608 aaPredicted RBP21.11■□□□□ 0.97
LRP4-202ENST00000527656 HMOX1P09601 288 aa21.11■□□□□ 0.97
LRP4-202ENST00000527656 TMOD3Q9NYL9 352 aa21.11■□□□□ 0.97
LRP4-202ENST00000527656 SIPA1L3O60292 1781 aaPredicted RBP21.1■□□□□ 0.97
LRP4-202ENST00000527656 MRC1P22897 1456 aa21.1■□□□□ 0.97
LRP4-202ENST00000527656 PLEKHO1Q53GL0 409 aaPredicted RBP21.1■□□□□ 0.97
LRP4-202ENST00000527656 ATG3Q9NT62 314 aa21.1■□□□□ 0.97
LRP4-202ENST00000527656 TFCP2L1Q9NZI6 479 aa21.1■□□□□ 0.97
LRP4-202ENST00000527656 PPP1R1BQ9UD71 204 aaPredicted RBP21.1■□□□□ 0.97
LRP4-202ENST00000527656 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
LRP4-202ENST00000527656 ITPK1Q13572 414 aa21.08■□□□□ 0.97
LRP4-202ENST00000527656 AMOTQ4VCS5 1084 aa21.08■□□□□ 0.97
LRP4-202ENST00000527656 SMIM5Q71RC9 77 aa21.08■□□□□ 0.97
LRP4-202ENST00000527656 COL23A1Q86Y22 540 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms