RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 DCTN1Q14203 1278 aa17.76■□□□□ 0.43
SORL1-205ENST00000527649 GAS2L2Q8NHY3 880 aa17.76■□□□□ 0.43
SORL1-205ENST00000527649 FBXO41Q8TF61 875 aa17.76■□□□□ 0.43
SORL1-205ENST00000527649 BCL9LQ86UU0 1499 aa17.76■□□□□ 0.43
SORL1-205ENST00000527649 MEX3CQ5U5Q3 659 aaKnown RBP17.76■□□□□ 0.43
SORL1-205ENST00000527649 TATP17735 454 aaPredicted RBP17.75■□□□□ 0.43
SORL1-205ENST00000527649 PDE3BQ13370 1112 aa17.75■□□□□ 0.43
SORL1-205ENST00000527649 FNBP4Q8N3X1 1017 aaPredicted RBP17.75■□□□□ 0.43
SORL1-205ENST00000527649 PLEKHO1Q53GL0 409 aaPredicted RBP17.74■□□□□ 0.43
SORL1-205ENST00000527649 UNC5CLQ8IV45 518 aa17.74■□□□□ 0.43
SORL1-205ENST00000527649 AMOTQ4VCS5 1084 aa17.74■□□□□ 0.43
SORL1-205ENST00000527649 ZNF530Q6P9A1 599 aaPredicted RBP17.74■□□□□ 0.43
SORL1-205ENST00000527649 MCM10Q7L590 875 aa17.74■□□□□ 0.43
SORL1-205ENST00000527649 WDR63Q8IWG1 891 aa17.74■□□□□ 0.43
SORL1-205ENST00000527649 OVOS2A0A0G2JMS6 1433 aa17.73■□□□□ 0.43
SORL1-205ENST00000527649 IL2RBP14784 551 aa17.73■□□□□ 0.43
SORL1-205ENST00000527649 SLFN5Q08AF3 891 aa17.73■□□□□ 0.43
SORL1-205ENST00000527649 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
SORL1-205ENST00000527649 SPATA31A1Q5TZJ5 1347 aa17.72■□□□□ 0.43
SORL1-205ENST00000527649 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
SORL1-205ENST00000527649 LMOD3Q0VAK6 560 aa17.72■□□□□ 0.43
SORL1-205ENST00000527649 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
SORL1-205ENST00000527649 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
SORL1-205ENST00000527649 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
SORL1-205ENST00000527649 USP21Q9UK80 565 aa17.71■□□□□ 0.43
SORL1-205ENST00000527649 PKD1L3Q7Z443 1732 aa17.71■□□□□ 0.43
SORL1-205ENST00000527649 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
SORL1-205ENST00000527649 AFF2P51816 1311 aa17.7■□□□□ 0.42
SORL1-205ENST00000527649 DISP2A7MBM2 1401 aa17.7■□□□□ 0.42
SORL1-205ENST00000527649 E9PSI1 815 aa17.7■□□□□ 0.42
SORL1-205ENST00000527649 TRMT2AQ8IZ69 625 aaKnown RBP17.7■□□□□ 0.42
SORL1-205ENST00000527649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.7■□□□□ 0.42
SORL1-205ENST00000527649 SPG7Q9UQ90 795 aa17.7■□□□□ 0.42
SORL1-205ENST00000527649 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
SORL1-205ENST00000527649 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
SORL1-205ENST00000527649 AKAP4Q5JQC9 854 aa17.69■□□□□ 0.42
SORL1-205ENST00000527649 IL17REQ8NFR9 667 aa17.69■□□□□ 0.42
SORL1-205ENST00000527649 RTF1Q92541 710 aaKnown RBP17.69■□□□□ 0.42
SORL1-205ENST00000527649 CYP27B1O15528 508 aa17.68■□□□□ 0.42
SORL1-205ENST00000527649 VPS72Q15906 364 aa17.68■□□□□ 0.42
SORL1-205ENST00000527649 ZCRB1Q8TBF4 217 aaKnown RBP17.68■□□□□ 0.42
SORL1-205ENST00000527649 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
SORL1-205ENST00000527649 C1orf141Q5JVX7 400 aa17.68■□□□□ 0.42
SORL1-205ENST00000527649 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
SORL1-205ENST00000527649 TSR2Q969E8 191 aaKnown RBP17.68■□□□□ 0.42
SORL1-205ENST00000527649 LGR6Q9HBX8 967 aa17.68■□□□□ 0.42
SORL1-205ENST00000527649 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.67■□□□□ 0.42
SORL1-205ENST00000527649 IL16Q14005 1332 aa17.67■□□□□ 0.42
SORL1-205ENST00000527649 PHKG2P15735 406 aa17.67■□□□□ 0.42
SORL1-205ENST00000527649 WNK3Q9BYP7 1800 aa17.67■□□□□ 0.42
SORL1-205ENST00000527649 SHANK3Q9BYB0 1731 aa17.67■□□□□ 0.42
SORL1-205ENST00000527649 LAS1LQ9Y4W2 734 aaKnown RBP17.66■□□□□ 0.42
SORL1-205ENST00000527649 LRRC37A3O60309 1634 aa17.66■□□□□ 0.42
SORL1-205ENST00000527649 THRAP3Q9Y2W1 955 aaKnown RBP17.66■□□□□ 0.42
SORL1-205ENST00000527649 FANCIQ9NVI1 1328 aa17.65■□□□□ 0.42
SORL1-205ENST00000527649 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
SORL1-205ENST00000527649 CALD1Q05682 793 aaKnown RBP17.65■□□□□ 0.42
SORL1-205ENST00000527649 IFNL2Q8IZJ0 200 aa17.65■□□□□ 0.42
SORL1-205ENST00000527649 PCDH11XQ9BZA7 1347 aa17.65■□□□□ 0.42
SORL1-205ENST00000527649 PCDH11YQ9BZA8 1340 aa17.65■□□□□ 0.42
SORL1-205ENST00000527649 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.41
SORL1-205ENST00000527649 ZNF853P0CG23 659 aa17.64■□□□□ 0.41
SORL1-205ENST00000527649 MYH16Q9H6N6 1097 aa17.64■□□□□ 0.41
SORL1-205ENST00000527649 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
SORL1-205ENST00000527649 RNMTO43148 476 aaKnown RBP17.63■□□□□ 0.41
SORL1-205ENST00000527649 FAM98CQ17RN3 349 aaKnown RBP17.63■□□□□ 0.41
SORL1-205ENST00000527649 BARGINQ6ZT62 677 aa17.63■□□□□ 0.41
SORL1-205ENST00000527649 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
SORL1-205ENST00000527649 CFAP44Q96MT7 982 aa17.63■□□□□ 0.41
SORL1-205ENST00000527649 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
SORL1-205ENST00000527649 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
SORL1-205ENST00000527649 GNAI1P63096 354 aa17.63■□□□□ 0.41
SORL1-205ENST00000527649 MBIPQ9NS73 344 aa17.63■□□□□ 0.41
SORL1-205ENST00000527649 ADAMTS7Q9UKP4 1686 aa17.62■□□□□ 0.41
SORL1-205ENST00000527649 ATRNO75882 1429 aa17.62■□□□□ 0.41
SORL1-205ENST00000527649 CDCA7Q9BWT1 371 aaPredicted RBP17.61■□□□□ 0.41
SORL1-205ENST00000527649 TNS2Q63HR2 1409 aa17.61■□□□□ 0.41
SORL1-205ENST00000527649 GLI3P10071 1580 aa17.61■□□□□ 0.41
SORL1-205ENST00000527649 CHL1O00533 1208 aa17.61■□□□□ 0.41
SORL1-205ENST00000527649 SCN11AQ9UI33 1791 aa17.6■□□□□ 0.41
SORL1-205ENST00000527649 EXOC5O00471 708 aa17.6■□□□□ 0.41
SORL1-205ENST00000527649 DCAF5Q96JK2 942 aa17.6■□□□□ 0.41
SORL1-205ENST00000527649 GJD4Q96KN9 370 aaPredicted RBP17.6■□□□□ 0.41
SORL1-205ENST00000527649 EXOSC9Q06265 439 aaKnown RBP17.59■□□□□ 0.41
SORL1-205ENST00000527649 TRPC5Q9UL62 973 aaPredicted RBP17.59■□□□□ 0.41
SORL1-205ENST00000527649 TAF7Q15545 349 aaPredicted RBP17.58■□□□□ 0.41
SORL1-205ENST00000527649 DDB1Q16531 1140 aa17.58■□□□□ 0.41
SORL1-205ENST00000527649 QTRT2Q9H974 415 aaKnown RBP17.58■□□□□ 0.41
SORL1-205ENST00000527649 HSP90AB1P08238 724 aaKnown RBP17.58■□□□□ 0.4
SORL1-205ENST00000527649 TEFQ10587 303 aa17.58■□□□□ 0.4
SORL1-205ENST00000527649 NKX1-1Q15270 411 aaPredicted RBP17.58■□□□□ 0.4
SORL1-205ENST00000527649 TSPYL4Q9UJ04 414 aa17.58■□□□□ 0.4
SORL1-205ENST00000527649 SIPA1L3O60292 1781 aaPredicted RBP17.56■□□□□ 0.4
SORL1-205ENST00000527649 SLC52A2Q9HAB3 445 aa17.56■□□□□ 0.4
SORL1-205ENST00000527649 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
SORL1-205ENST00000527649 THSD7AQ9UPZ6 1657 aa17.56■□□□□ 0.4
SORL1-205ENST00000527649 KRT24Q2M2I5 525 aa17.56■□□□□ 0.4
SORL1-205ENST00000527649 NFATC2IPQ8NCF5 419 aa17.56■□□□□ 0.4
SORL1-205ENST00000527649 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
SORL1-205ENST00000527649 MRC1P22897 1456 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms