RNA–Protein interactions for RNA: ENST00000527573.5

CSRP1-210, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-210ENST00000527573 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
CSRP1-210ENST00000527573 HSP90AB2PQ58FF8 381 aa18.09■□□□□ 0.49
CSRP1-210ENST00000527573 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
CSRP1-210ENST00000527573 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.48
CSRP1-210ENST00000527573 RTL1A6NKG5 1358 aa18.07■□□□□ 0.48
CSRP1-210ENST00000527573 YY1P25490 414 aa18.07■□□□□ 0.48
CSRP1-210ENST00000527573 NSD2O96028 1365 aa18.06■□□□□ 0.48
CSRP1-210ENST00000527573 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
CSRP1-210ENST00000527573 FHDC1Q9C0D6 1143 aaPredicted RBP18.06■□□□□ 0.48
CSRP1-210ENST00000527573 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
CSRP1-210ENST00000527573 MTFR1LQ9H019 292 aa18.04■□□□□ 0.48
CSRP1-210ENST00000527573 TUBGCP6Q96RT7 1819 aa18.04■□□□□ 0.48
CSRP1-210ENST00000527573 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
CSRP1-210ENST00000527573 CDCA8Q53HL2 280 aa18.03■□□□□ 0.48
CSRP1-210ENST00000527573 KLHL34Q8N239 644 aa18.03■□□□□ 0.48
CSRP1-210ENST00000527573 RAPGEF4Q8WZA2 1011 aa18.03■□□□□ 0.48
CSRP1-210ENST00000527573 SGIP1Q9BQI5 828 aa18.03■□□□□ 0.48
CSRP1-210ENST00000527573 TNNT2P45379 298 aaPredicted RBP18.02■□□□□ 0.48
CSRP1-210ENST00000527573 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
CSRP1-210ENST00000527573 INSRP06213 1382 aa18.02■□□□□ 0.47
CSRP1-210ENST00000527573 FLT4P35916 1363 aa18.02■□□□□ 0.47
CSRP1-210ENST00000527573 TATP17735 454 aaPredicted RBP18.01■□□□□ 0.47
CSRP1-210ENST00000527573 SYT17Q9BSW7 474 aa18.01■□□□□ 0.47
CSRP1-210ENST00000527573 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
CSRP1-210ENST00000527573 TFCP2L1Q9NZI6 479 aa18■□□□□ 0.47
CSRP1-210ENST00000527573 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
CSRP1-210ENST00000527573 ARXQ96QS3 562 aa17.99■□□□□ 0.47
CSRP1-210ENST00000527573 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
CSRP1-210ENST00000527573 LY75O60449 1722 aa17.98■□□□□ 0.47
CSRP1-210ENST00000527573 SLC27A3Q5K4L6 730 aa17.98■□□□□ 0.47
CSRP1-210ENST00000527573 CYP27B1O15528 508 aa17.97■□□□□ 0.47
CSRP1-210ENST00000527573 MSH5O43196 834 aa17.97■□□□□ 0.47
CSRP1-210ENST00000527573 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
CSRP1-210ENST00000527573 TOGARAM1Q9Y4F4 1720 aa17.97■□□□□ 0.47
CSRP1-210ENST00000527573 MSL1Q68DK7 614 aa17.96■□□□□ 0.47
CSRP1-210ENST00000527573 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
CSRP1-210ENST00000527573 SMIM5Q71RC9 77 aa17.96■□□□□ 0.47
CSRP1-210ENST00000527573 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.46
CSRP1-210ENST00000527573 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.46
CSRP1-210ENST00000527573 UTRNP46939 3433 aa17.95■□□□□ 0.46
CSRP1-210ENST00000527573 MAP2P11137 1827 aaKnown RBP17.94■□□□□ 0.46
CSRP1-210ENST00000527573 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
CSRP1-210ENST00000527573 CGNL1Q0VF96 1302 aa17.94■□□□□ 0.46
CSRP1-210ENST00000527573 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
CSRP1-210ENST00000527573 EYA1Q99502 592 aa17.93■□□□□ 0.46
CSRP1-210ENST00000527573 POLKQ9UBT6 870 aa17.93■□□□□ 0.46
CSRP1-210ENST00000527573 PALLDQ8WX93 1383 aa17.92■□□□□ 0.46
CSRP1-210ENST00000527573 QSER1Q2KHR3 1735 aa17.92■□□□□ 0.46
CSRP1-210ENST00000527573 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
CSRP1-210ENST00000527573 COL23A1Q86Y22 540 aaPredicted RBP17.92■□□□□ 0.46
CSRP1-210ENST00000527573 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
CSRP1-210ENST00000527573 NLGN2Q8NFZ4 835 aa17.91■□□□□ 0.46
CSRP1-210ENST00000527573 PKD1L3Q7Z443 1732 aa17.91■□□□□ 0.46
CSRP1-210ENST00000527573 ITGB4P16144 1822 aa17.91■□□□□ 0.46
CSRP1-210ENST00000527573 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
CSRP1-210ENST00000527573 C5P01031 1676 aa17.9■□□□□ 0.46
CSRP1-210ENST00000527573 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.46
CSRP1-210ENST00000527573 AMIGO3Q86WK7 504 aa17.9■□□□□ 0.46
CSRP1-210ENST00000527573 PANK3Q9H999 370 aa17.9■□□□□ 0.46
CSRP1-210ENST00000527573 WASHC2AQ641Q2 1341 aa17.9■□□□□ 0.46
CSRP1-210ENST00000527573 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
CSRP1-210ENST00000527573 POLD1P28340 1107 aa17.89■□□□□ 0.45
CSRP1-210ENST00000527573 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
CSRP1-210ENST00000527573 PIGBQ92521 554 aa17.89■□□□□ 0.45
CSRP1-210ENST00000527573 NCAPD2Q15021 1401 aa17.88■□□□□ 0.45
CSRP1-210ENST00000527573 PHF14O94880 888 aa17.87■□□□□ 0.45
CSRP1-210ENST00000527573 GPR162Q16538 588 aa17.87■□□□□ 0.45
CSRP1-210ENST00000527573 SLC16A10Q8TF71 515 aa17.87■□□□□ 0.45
CSRP1-210ENST00000527573 TAF1LQ8IZX4 1826 aa17.86■□□□□ 0.45
CSRP1-210ENST00000527573 SPG7Q9UQ90 795 aa17.86■□□□□ 0.45
CSRP1-210ENST00000527573 ZNF784Q8NCA9 323 aaPredicted RBP17.85■□□□□ 0.45
CSRP1-210ENST00000527573 ASAP1Q9ULH1 1129 aa17.85■□□□□ 0.45
CSRP1-210ENST00000527573 COL24A1Q17RW2 1714 aa17.84■□□□□ 0.45
CSRP1-210ENST00000527573 MAP3K5Q99683 1374 aa17.84■□□□□ 0.45
CSRP1-210ENST00000527573 WWC3Q9ULE0 1092 aa17.84■□□□□ 0.45
CSRP1-210ENST00000527573 C4BP0C0L5 1744 aa17.84■□□□□ 0.45
CSRP1-210ENST00000527573 PHKG2P15735 406 aa17.83■□□□□ 0.44
CSRP1-210ENST00000527573 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
CSRP1-210ENST00000527573 AK7Q96M32 723 aa17.83■□□□□ 0.44
CSRP1-210ENST00000527573 GOLGB1Q14789 3259 aaKnown RBP17.83■□□□□ 0.44
CSRP1-210ENST00000527573 AEBP1Q8IUX7 1158 aa17.82■□□□□ 0.44
CSRP1-210ENST00000527573 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
CSRP1-210ENST00000527573 ITPK1Q13572 414 aa17.81■□□□□ 0.44
CSRP1-210ENST00000527573 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
CSRP1-210ENST00000527573 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
CSRP1-210ENST00000527573 LOC102724428A0A0B4J2F2 783 aa17.8■□□□□ 0.44
CSRP1-210ENST00000527573 YBX3P16989 372 aaKnown RBP eCLIP17.8■□□□□ 0.44
CSRP1-210ENST00000527573 SIK1P57059 783 aa17.8■□□□□ 0.44
CSRP1-210ENST00000527573 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
CSRP1-210ENST00000527573 IFNL2Q8IZJ0 200 aa17.8■□□□□ 0.44
CSRP1-210ENST00000527573 SMARCC1Q92922 1105 aaPredicted RBP17.8■□□□□ 0.44
CSRP1-210ENST00000527573 IGSF1Q8N6C5 1336 aa17.79■□□□□ 0.44
CSRP1-210ENST00000527573 CHD4Q14839 1912 aa17.79■□□□□ 0.44
CSRP1-210ENST00000527573 UBR3Q6ZT12 1888 aa17.78■□□□□ 0.44
CSRP1-210ENST00000527573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.78■□□□□ 0.44
CSRP1-210ENST00000527573 ATG3Q9NT62 314 aa17.78■□□□□ 0.44
CSRP1-210ENST00000527573 GNPATO15228 680 aa17.77■□□□□ 0.44
CSRP1-210ENST00000527573 ATP6V1AP38606 617 aa17.77■□□□□ 0.44
CSRP1-210ENST00000527573 ZNF530Q6P9A1 599 aaPredicted RBP17.77■□□□□ 0.44
CSRP1-210ENST00000527573 RBM42Q9BTD8 480 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms