RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 NCBP3Q53F19 620 aaKnown RBP24.53■■□□□ 1.52
SMPD1-203ENST00000527275 MEX3CQ5U5Q3 659 aaKnown RBP24.53■■□□□ 1.52
SMPD1-203ENST00000527275 FNBP4Q8N3X1 1017 aaPredicted RBP24.52■■□□□ 1.52
SMPD1-203ENST00000527275 MEGF6O75095 1541 aa24.52■■□□□ 1.52
SMPD1-203ENST00000527275 NWD2Q9ULI1 1742 aa24.52■■□□□ 1.52
SMPD1-203ENST00000527275 NRAPQ86VF7 1730 aa24.52■■□□□ 1.52
SMPD1-203ENST00000527275 GAS2L2Q8NHY3 880 aa24.52■■□□□ 1.52
SMPD1-203ENST00000527275 DLG5Q8TDM6 1919 aa24.51■■□□□ 1.51
SMPD1-203ENST00000527275 BCL9LQ86UU0 1499 aa24.51■■□□□ 1.51
SMPD1-203ENST00000527275 UNC5CLQ8IV45 518 aa24.5■■□□□ 1.51
SMPD1-203ENST00000527275 RCAN3Q9UKA8 241 aa24.5■■□□□ 1.51
SMPD1-203ENST00000527275 TATP17735 454 aaPredicted RBP24.5■■□□□ 1.51
SMPD1-203ENST00000527275 GOLGA2Q08379 1002 aa24.49■■□□□ 1.51
SMPD1-203ENST00000527275 PLEKHO1Q53GL0 409 aaPredicted RBP24.49■■□□□ 1.51
SMPD1-203ENST00000527275 AMOTQ4VCS5 1084 aa24.49■■□□□ 1.51
SMPD1-203ENST00000527275 IL2RBP14784 551 aa24.47■■□□□ 1.51
SMPD1-203ENST00000527275 PPP4R2Q9NY27 417 aa24.47■■□□□ 1.51
SMPD1-203ENST00000527275 USP21Q9UK80 565 aa24.47■■□□□ 1.51
SMPD1-203ENST00000527275 DCTN1Q14203 1278 aa24.46■■□□□ 1.51
SMPD1-203ENST00000527275 THUMPD2Q9BTF0 503 aaKnown RBP24.46■■□□□ 1.51
SMPD1-203ENST00000527275 SPINK5Q9NQ38 1064 aaPredicted RBP24.46■■□□□ 1.51
SMPD1-203ENST00000527275 CCDC9Q9Y3X0 531 aaKnown RBP24.46■■□□□ 1.51
SMPD1-203ENST00000527275 SPATA31A1Q5TZJ5 1347 aa24.45■■□□□ 1.51
SMPD1-203ENST00000527275 LMOD3Q0VAK6 560 aa24.45■■□□□ 1.5
SMPD1-203ENST00000527275 WDR63Q8IWG1 891 aa24.45■■□□□ 1.5
SMPD1-203ENST00000527275 ZNF530Q6P9A1 599 aaPredicted RBP24.44■■□□□ 1.5
SMPD1-203ENST00000527275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.44■■□□□ 1.5
SMPD1-203ENST00000527275 SPATA31A5Q5VU36 1347 aa24.44■■□□□ 1.5
SMPD1-203ENST00000527275 SPATA31A7Q8IWB4 1347 aa24.44■■□□□ 1.5
SMPD1-203ENST00000527275 OVOS2A0A0G2JMS6 1433 aa24.44■■□□□ 1.5
SMPD1-203ENST00000527275 GNAT3A8MTJ3 354 aa24.44■■□□□ 1.5
SMPD1-203ENST00000527275 MCM10Q7L590 875 aa24.44■■□□□ 1.5
SMPD1-203ENST00000527275 DUSP27Q5VZP5 1158 aa24.43■■□□□ 1.5
SMPD1-203ENST00000527275 SPG7Q9UQ90 795 aa24.43■■□□□ 1.5
SMPD1-203ENST00000527275 AFF2P51816 1311 aa24.43■■□□□ 1.5
SMPD1-203ENST00000527275 SLFN5Q08AF3 891 aa24.43■■□□□ 1.5
SMPD1-203ENST00000527275 MAP3K5Q99683 1374 aa24.42■■□□□ 1.5
SMPD1-203ENST00000527275 RTF1Q92541 710 aaKnown RBP24.42■■□□□ 1.5
SMPD1-203ENST00000527275 PLEKHG2Q9H7P9 1386 aa24.42■■□□□ 1.5
SMPD1-203ENST00000527275 RRP1P56182 461 aaKnown RBP24.42■■□□□ 1.5
SMPD1-203ENST00000527275 VPS72Q15906 364 aa24.42■■□□□ 1.5
SMPD1-203ENST00000527275 AKAP4Q5JQC9 854 aa24.41■■□□□ 1.5
SMPD1-203ENST00000527275 PARP4Q9UKK3 1724 aaKnown RBP24.41■■□□□ 1.5
SMPD1-203ENST00000527275 C1orf141Q5JVX7 400 aa24.4■■□□□ 1.5
SMPD1-203ENST00000527275 ZCRB1Q8TBF4 217 aaKnown RBP24.4■■□□□ 1.5
SMPD1-203ENST00000527275 THRAP3Q9Y2W1 955 aaKnown RBP24.4■■□□□ 1.5
SMPD1-203ENST00000527275 E9PSI1 815 aa24.39■■□□□ 1.5
SMPD1-203ENST00000527275 HTATSF1O43719 755 aaKnown RBP24.39■■□□□ 1.5
SMPD1-203ENST00000527275 TRMT2AQ8IZ69 625 aaKnown RBP24.39■■□□□ 1.5
SMPD1-203ENST00000527275 CYP27B1O15528 508 aa24.39■■□□□ 1.49
SMPD1-203ENST00000527275 IL17REQ8NFR9 667 aa24.39■■□□□ 1.49
SMPD1-203ENST00000527275 PKD1L3Q7Z443 1732 aa24.39■■□□□ 1.49
SMPD1-203ENST00000527275 DISP2A7MBM2 1401 aa24.38■■□□□ 1.49
SMPD1-203ENST00000527275 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.37■■□□□ 1.49
SMPD1-203ENST00000527275 MPRIPQ6WCQ1 1025 aa24.37■■□□□ 1.49
SMPD1-203ENST00000527275 PHKG2P15735 406 aa24.36■■□□□ 1.49
SMPD1-203ENST00000527275 IFNL2Q8IZJ0 200 aa24.36■■□□□ 1.49
SMPD1-203ENST00000527275 IL16Q14005 1332 aa24.36■■□□□ 1.49
SMPD1-203ENST00000527275 CALD1Q05682 793 aaKnown RBP24.36■■□□□ 1.49
SMPD1-203ENST00000527275 LGR6Q9HBX8 967 aa24.36■■□□□ 1.49
SMPD1-203ENST00000527275 BARGINQ6ZT62 677 aa24.35■■□□□ 1.49
SMPD1-203ENST00000527275 LAS1LQ9Y4W2 734 aaKnown RBP24.35■■□□□ 1.49
SMPD1-203ENST00000527275 PCDH11XQ9BZA7 1347 aa24.35■■□□□ 1.49
SMPD1-203ENST00000527275 PCDH11YQ9BZA8 1340 aa24.35■■□□□ 1.49
SMPD1-203ENST00000527275 DDX54Q8TDD1 881 aaKnown RBP24.34■■□□□ 1.49
SMPD1-203ENST00000527275 CDCA7Q9BWT1 371 aaPredicted RBP24.34■■□□□ 1.49
SMPD1-203ENST00000527275 FAM98CQ17RN3 349 aaKnown RBP24.33■■□□□ 1.49
SMPD1-203ENST00000527275 TSR2Q969E8 191 aaKnown RBP24.33■■□□□ 1.48
SMPD1-203ENST00000527275 CEMIPQ8WUJ3 1361 aa24.32■■□□□ 1.48
SMPD1-203ENST00000527275 MYH16Q9H6N6 1097 aa24.32■■□□□ 1.48
SMPD1-203ENST00000527275 TRPC5Q9UL62 973 aaPredicted RBP24.32■■□□□ 1.48
SMPD1-203ENST00000527275 WNK3Q9BYP7 1800 aa24.32■■□□□ 1.48
SMPD1-203ENST00000527275 EXOC5O00471 708 aa24.32■■□□□ 1.48
SMPD1-203ENST00000527275 GJD4Q96KN9 370 aaPredicted RBP24.32■■□□□ 1.48
SMPD1-203ENST00000527275 CFAP44Q96MT7 982 aa24.32■■□□□ 1.48
SMPD1-203ENST00000527275 IFT57Q9NWB7 429 aa24.32■■□□□ 1.48
SMPD1-203ENST00000527275 SHANK3Q9BYB0 1731 aa24.31■■□□□ 1.48
SMPD1-203ENST00000527275 RNMTO43148 476 aaKnown RBP24.3■■□□□ 1.48
SMPD1-203ENST00000527275 ZNF853P0CG23 659 aa24.3■■□□□ 1.48
SMPD1-203ENST00000527275 GNAI1P63096 354 aa24.3■■□□□ 1.48
SMPD1-203ENST00000527275 B4GALNT3Q6L9W6 998 aa24.3■■□□□ 1.48
SMPD1-203ENST00000527275 FANCIQ9NVI1 1328 aa24.3■■□□□ 1.48
SMPD1-203ENST00000527275 QTRT2Q9H974 415 aaKnown RBP24.3■■□□□ 1.48
SMPD1-203ENST00000527275 KDM6AO15550 1401 aaPredicted RBP24.29■■□□□ 1.48
SMPD1-203ENST00000527275 ATRNO75882 1429 aa24.29■■□□□ 1.48
SMPD1-203ENST00000527275 DDB1Q16531 1140 aa24.29■■□□□ 1.48
SMPD1-203ENST00000527275 DCAF5Q96JK2 942 aa24.29■■□□□ 1.48
SMPD1-203ENST00000527275 MBIPQ9NS73 344 aa24.28■■□□□ 1.48
SMPD1-203ENST00000527275 MIS18AQ9NYP9 233 aa24.28■■□□□ 1.48
SMPD1-203ENST00000527275 LRRC37A3O60309 1634 aa24.28■■□□□ 1.48
SMPD1-203ENST00000527275 HSP90AB1P08238 724 aaKnown RBP24.27■■□□□ 1.48
SMPD1-203ENST00000527275 VIRMAQ69YN4 1812 aaKnown RBP24.27■■□□□ 1.48
SMPD1-203ENST00000527275 GLI3P10071 1580 aa24.26■■□□□ 1.47
SMPD1-203ENST00000527275 TNS2Q63HR2 1409 aa24.26■■□□□ 1.47
SMPD1-203ENST00000527275 CHL1O00533 1208 aa24.26■■□□□ 1.47
SMPD1-203ENST00000527275 TEFQ10587 303 aa24.26■■□□□ 1.47
SMPD1-203ENST00000527275 PLIN1O60240 522 aa24.26■■□□□ 1.47
SMPD1-203ENST00000527275 NKX1-1Q15270 411 aaPredicted RBP24.26■■□□□ 1.47
SMPD1-203ENST00000527275 TAF7Q15545 349 aaPredicted RBP24.26■■□□□ 1.47
SMPD1-203ENST00000527275 ADAMTS7Q9UKP4 1686 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms