RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 NUTM2DQ5VT03 806 aaPredicted RBP6.68□□□□□ -1.34
CLNS1A-208ENST00000527265 RIPOR1Q6ZS17 1223 aa6.68□□□□□ -1.34
CLNS1A-208ENST00000527265 NUTM2AQ8IVF1 878 aaPredicted RBP6.68□□□□□ -1.34
CLNS1A-208ENST00000527265 ACDQ96AP0 544 aa6.68□□□□□ -1.34
CLNS1A-208ENST00000527265 CUEDC1Q9NWM3 386 aaPredicted RBP6.68□□□□□ -1.34
CLNS1A-208ENST00000527265 KRBA1A5PL33 1030 aa6.67□□□□□ -1.34
CLNS1A-208ENST00000527265 MX2P20592 715 aa6.67□□□□□ -1.34
CLNS1A-208ENST00000527265 CSPP1Q1MSJ5 1256 aa6.67□□□□□ -1.34
CLNS1A-208ENST00000527265 TRIM52Q96A61 297 aa6.67□□□□□ -1.34
CLNS1A-208ENST00000527265 ARHGAP9Q9BRR9 750 aa6.67□□□□□ -1.34
CLNS1A-208ENST00000527265 PIK3R2O00459 728 aa6.66□□□□□ -1.34
CLNS1A-208ENST00000527265 OIP5O43482 229 aa6.66□□□□□ -1.34
CLNS1A-208ENST00000527265 GIGYF2Q6Y7W6 1299 aaKnown RBP6.66□□□□□ -1.34
CLNS1A-208ENST00000527265 ZBTB33Q86T24 672 aa6.66□□□□□ -1.34
CLNS1A-208ENST00000527265 GPBP1L1Q9HC44 474 aaPredicted RBP6.66□□□□□ -1.34
CLNS1A-208ENST00000527265 ADH1AP07327 375 aa6.65□□□□□ -1.34
CLNS1A-208ENST00000527265 FOXD4L5Q5VV16 416 aaPredicted RBP6.65□□□□□ -1.34
CLNS1A-208ENST00000527265 RIC3Q7Z5B4 369 aa6.65□□□□□ -1.34
CLNS1A-208ENST00000527265 CABLES1Q8TDN4 633 aa6.65□□□□□ -1.34
CLNS1A-208ENST00000527265 RRAGCQ9HB90 399 aa6.65□□□□□ -1.34
CLNS1A-208ENST00000527265 PDE4DQ08499 809 aa6.64□□□□□ -1.35
CLNS1A-208ENST00000527265 NBPF20Q3BBV1 942 aa6.64□□□□□ -1.35
CLNS1A-208ENST00000527265 INTS6LQ5JSJ4 861 aaKnown RBP6.64□□□□□ -1.35
CLNS1A-208ENST00000527265 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
CLNS1A-208ENST00000527265 PRICKLE2Q7Z3G6 844 aa6.64□□□□□ -1.35
CLNS1A-208ENST00000527265 ZMYND15Q9H091 742 aa6.64□□□□□ -1.35
CLNS1A-208ENST00000527265 RSPH6AQ9H0K4 717 aa6.64□□□□□ -1.35
CLNS1A-208ENST00000527265 BTBD11A6QL63 1104 aa6.63□□□□□ -1.35
CLNS1A-208ENST00000527265 PTGIRP43119 386 aa6.63□□□□□ -1.35
CLNS1A-208ENST00000527265 MAP2K3P46734 347 aa6.63□□□□□ -1.35
CLNS1A-208ENST00000527265 GRIN2CQ14957 1233 aa6.63□□□□□ -1.35
CLNS1A-208ENST00000527265 ZMYM1Q5SVZ6 1142 aa6.63□□□□□ -1.35
CLNS1A-208ENST00000527265 GTPBP3Q969Y2 492 aaKnown RBP6.63□□□□□ -1.35
CLNS1A-208ENST00000527265 OXCT2Q9BYC2 517 aaPredicted RBP6.63□□□□□ -1.35
CLNS1A-208ENST00000527265 KDM4CQ9H3R0 1056 aa6.63□□□□□ -1.35
CLNS1A-208ENST00000527265 RHOQP17081 205 aa6.62□□□□□ -1.35
CLNS1A-208ENST00000527265 SNRPNP63162 240 aaKnown RBP6.62□□□□□ -1.35
CLNS1A-208ENST00000527265 AMHR2Q16671 573 aa6.62□□□□□ -1.35
CLNS1A-208ENST00000527265 PDXDC2PQ6P474 469 aa6.62□□□□□ -1.35
CLNS1A-208ENST00000527265 SCO2A0A1W2PP80 73 aa6.61□□□□□ -1.35
CLNS1A-208ENST00000527265 DBN1Q16643 649 aa6.61□□□□□ -1.35
CLNS1A-208ENST00000527265 ARID3AQ99856 593 aa6.61□□□□□ -1.35
CLNS1A-208ENST00000527265 DYRK1BQ9Y463 629 aa6.61□□□□□ -1.35
CLNS1A-208ENST00000527265 AMPD1P23109 780 aa6.6□□□□□ -1.35
CLNS1A-208ENST00000527265 RNF144AP50876 292 aaPredicted RBP6.6□□□□□ -1.35
CLNS1A-208ENST00000527265 ZNF784Q8NCA9 323 aaPredicted RBP6.6□□□□□ -1.35
CLNS1A-208ENST00000527265 GAS2L1Q99501 681 aaPredicted RBP6.6□□□□□ -1.35
CLNS1A-208ENST00000527265 COL8A1P27658 744 aa6.59□□□□□ -1.35
CLNS1A-208ENST00000527265 RAB15P59190 212 aa6.59□□□□□ -1.35
CLNS1A-208ENST00000527265 SEMA6BQ9H3T3 888 aa6.59□□□□□ -1.35
CLNS1A-208ENST00000527265 GDF2Q9UK05 429 aaPredicted RBP6.59□□□□□ -1.35
CLNS1A-208ENST00000527265 PARP9Q8IXQ6 854 aa6.58□□□□□ -1.36
CLNS1A-208ENST00000527265 IL27Q8NEV9 243 aa6.58□□□□□ -1.36
CLNS1A-208ENST00000527265 C1orf115Q9H7X2 142 aa6.58□□□□□ -1.36
CLNS1A-208ENST00000527265 TMPRSS4Q9NRS4 437 aa6.58□□□□□ -1.36
CLNS1A-208ENST00000527265 FKBPLQ9UIM3 349 aa6.58□□□□□ -1.36
CLNS1A-208ENST00000527265 ZC3H4Q9UPT8 1303 aaKnown RBP6.57□□□□□ -1.36
CLNS1A-208ENST00000527265 GPC1P35052 558 aa6.57□□□□□ -1.36
CLNS1A-208ENST00000527265 PTK2Q05397 1052 aa6.57□□□□□ -1.36
CLNS1A-208ENST00000527265 NOP53Q9NZM5 478 aaKnown RBP6.57□□□□□ -1.36
CLNS1A-208ENST00000527265 PHF24Q9UPV7 400 aa6.57□□□□□ -1.36
CLNS1A-208ENST00000527265 C1QTNF9BB2RNN3 333 aa6.56□□□□□ -1.36
CLNS1A-208ENST00000527265 GNB5O14775 395 aa6.56□□□□□ -1.36
CLNS1A-208ENST00000527265 QPCTQ16769 361 aa6.56□□□□□ -1.36
CLNS1A-208ENST00000527265 EDARADDQ8WWZ3 215 aa6.56□□□□□ -1.36
CLNS1A-208ENST00000527265 NUCKS1Q9H1E3 243 aaKnown RBP6.56□□□□□ -1.36
CLNS1A-208ENST00000527265 SHISA8B8ZZ34 492 aa6.55□□□□□ -1.36
CLNS1A-208ENST00000527265 LILRB3O75022 631 aa6.55□□□□□ -1.36
CLNS1A-208ENST00000527265 TUSC1Q2TAM9 212 aa6.55□□□□□ -1.36
CLNS1A-208ENST00000527265 SLC27A3Q5K4L6 730 aa6.55□□□□□ -1.36
CLNS1A-208ENST00000527265 GOLGA6L1Q8N7Z2 621 aa6.55□□□□□ -1.36
CLNS1A-208ENST00000527265 FAM117AQ9C073 453 aa6.55□□□□□ -1.36
CLNS1A-208ENST00000527265 ERVH48-1M5A8F1 160 aa6.54□□□□□ -1.36
CLNS1A-208ENST00000527265 MEN1O00255 615 aa6.54□□□□□ -1.36
CLNS1A-208ENST00000527265 LILRA1O75019 489 aa6.54□□□□□ -1.36
CLNS1A-208ENST00000527265 NBPF11Q86T75 865 aa6.54□□□□□ -1.36
CLNS1A-208ENST00000527265 CD163Q86VB7 1156 aa6.54□□□□□ -1.36
CLNS1A-208ENST00000527265 GPSM3Q9Y4H4 160 aa6.54□□□□□ -1.36
CLNS1A-208ENST00000527265 ATP5J2-PTCD1G3V325 749 aa6.53□□□□□ -1.36
CLNS1A-208ENST00000527265 ADD1P35611 737 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-208ENST00000527265 PNMA1Q8ND90 353 aa6.53□□□□□ -1.36
CLNS1A-208ENST00000527265 DDRGK1Q96HY6 314 aa6.53□□□□□ -1.36
CLNS1A-208ENST00000527265 NLRP3Q96P20 1036 aa6.53□□□□□ -1.36
CLNS1A-208ENST00000527265 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
CLNS1A-208ENST00000527265 CFHR5Q9BXR6 569 aa6.53□□□□□ -1.36
CLNS1A-208ENST00000527265 LIMD1Q9UGP4 676 aa6.53□□□□□ -1.36
CLNS1A-208ENST00000527265 CCDC9Q9Y3X0 531 aaKnown RBP6.53□□□□□ -1.36
CLNS1A-208ENST00000527265 DOC2BQ14184 412 aa6.52□□□□□ -1.37
CLNS1A-208ENST00000527265 DZIP3Q86Y13 1208 aaKnown RBP6.52□□□□□ -1.37
CLNS1A-208ENST00000527265 KDF1Q8NAX2 398 aaPredicted RBP6.52□□□□□ -1.37
CLNS1A-208ENST00000527265 ADAM32Q8TC27 787 aa6.52□□□□□ -1.37
CLNS1A-208ENST00000527265 KLRG1Q96E93 195 aa6.52□□□□□ -1.37
CLNS1A-208ENST00000527265 ZBTB7CA1YPR0 619 aa6.51□□□□□ -1.37
CLNS1A-208ENST00000527265 F11P03951 625 aa6.51□□□□□ -1.37
CLNS1A-208ENST00000527265 CHRNA4P43681 627 aa6.51□□□□□ -1.37
CLNS1A-208ENST00000527265 POU4F2Q12837 409 aa6.51□□□□□ -1.37
CLNS1A-208ENST00000527265 MYSM1Q5VVJ2 828 aa6.51□□□□□ -1.37
CLNS1A-208ENST00000527265 SUV39H2Q9H5I1 410 aa6.51□□□□□ -1.37
CLNS1A-208ENST00000527265 ZFP64Q9NPA5 681 aa6.51□□□□□ -1.37
CLNS1A-208ENST00000527265 CYLDQ9NQC7 956 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms