RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 KCNQ2O43526 872 aa22.15■■□□□ 1.14
CTSB-213ENST00000527215 ACSBG1Q96GR2 724 aa22.15■■□□□ 1.14
CTSB-213ENST00000527215 DDX54Q8TDD1 881 aaKnown RBP22.14■■□□□ 1.13
CTSB-213ENST00000527215 NSD2O96028 1365 aa22.13■■□□□ 1.13
CTSB-213ENST00000527215 TNNT2P45379 298 aaPredicted RBP22.13■■□□□ 1.13
CTSB-213ENST00000527215 PKD1L3Q7Z443 1732 aa22.13■■□□□ 1.13
CTSB-213ENST00000527215 POLKQ9UBT6 870 aa22.12■■□□□ 1.13
CTSB-213ENST00000527215 WASHC2AQ641Q2 1341 aa22.11■■□□□ 1.13
CTSB-213ENST00000527215 ZCRB1Q8TBF4 217 aaKnown RBP22.11■■□□□ 1.13
CTSB-213ENST00000527215 RAPGEF4Q8WZA2 1011 aa22.1■■□□□ 1.13
CTSB-213ENST00000527215 NCAPD2Q15021 1401 aa22.09■■□□□ 1.13
CTSB-213ENST00000527215 TATP17735 454 aaPredicted RBP22.08■■□□□ 1.13
CTSB-213ENST00000527215 PROM2Q8N271 834 aa22.08■■□□□ 1.13
CTSB-213ENST00000527215 KNSTRNQ9Y448 316 aa22.08■■□□□ 1.13
CTSB-213ENST00000527215 TXNRD1Q16881 649 aa22.07■■□□□ 1.12
CTSB-213ENST00000527215 LY75O60449 1722 aa22.06■■□□□ 1.12
CTSB-213ENST00000527215 ITGB4P16144 1822 aa22.06■■□□□ 1.12
CTSB-213ENST00000527215 CASZ1Q86V15 1759 aa22.06■■□□□ 1.12
CTSB-213ENST00000527215 MORC1Q86VD1 984 aa22.05■■□□□ 1.12
CTSB-213ENST00000527215 SPON1Q9HCB6 807 aa22.05■■□□□ 1.12
CTSB-213ENST00000527215 TOGARAM1Q9Y4F4 1720 aa22.05■■□□□ 1.12
CTSB-213ENST00000527215 PAPPAQ13219 1627 aa22.05■■□□□ 1.12
CTSB-213ENST00000527215 EYA1Q99502 592 aa22.04■■□□□ 1.12
CTSB-213ENST00000527215 ANO8Q9HCE9 1232 aaPredicted RBP22.04■■□□□ 1.12
CTSB-213ENST00000527215 PPP1R1BQ9UD71 204 aaPredicted RBP22.04■■□□□ 1.12
CTSB-213ENST00000527215 EIF4A2Q14240 407 aaKnown RBP22.02■■□□□ 1.12
CTSB-213ENST00000527215 SYTL4Q96C24 671 aaPredicted RBP22.02■■□□□ 1.12
CTSB-213ENST00000527215 PCDH11XQ9BZA7 1347 aa22.02■■□□□ 1.12
CTSB-213ENST00000527215 PCDH11YQ9BZA8 1340 aa22.02■■□□□ 1.12
CTSB-213ENST00000527215 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
CTSB-213ENST00000527215 AMER1Q5JTC6 1135 aaPredicted RBP22.01■■□□□ 1.11
CTSB-213ENST00000527215 TUBGCP6Q96RT7 1819 aa21.98■■□□□ 1.11
CTSB-213ENST00000527215 QSER1Q2KHR3 1735 aa21.97■■□□□ 1.11
CTSB-213ENST00000527215 CYP27B1O15528 508 aa21.97■■□□□ 1.11
CTSB-213ENST00000527215 PER1O15534 1290 aaPredicted RBP21.97■■□□□ 1.11
CTSB-213ENST00000527215 STK32BQ9NY57 414 aa21.97■■□□□ 1.11
CTSB-213ENST00000527215 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
CTSB-213ENST00000527215 SLC15A2Q16348 729 aa21.95■■□□□ 1.1
CTSB-213ENST00000527215 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
CTSB-213ENST00000527215 IGSF1Q8N6C5 1336 aa21.95■■□□□ 1.1
CTSB-213ENST00000527215 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
CTSB-213ENST00000527215 LRRC4BQ9NT99 713 aa21.94■■□□□ 1.1
CTSB-213ENST00000527215 CC2D1BQ5T0F9 858 aaKnown RBP21.93■■□□□ 1.1
CTSB-213ENST00000527215 PDGFDQ9GZP0 370 aaPredicted RBP21.93■■□□□ 1.1
CTSB-213ENST00000527215 C5P01031 1676 aa21.92■■□□□ 1.1
CTSB-213ENST00000527215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.92■■□□□ 1.1
CTSB-213ENST00000527215 SLC27A3Q5K4L6 730 aa21.91■■□□□ 1.1
CTSB-213ENST00000527215 PLEKHG2Q9H7P9 1386 aa21.9■■□□□ 1.1
CTSB-213ENST00000527215 VIRMAQ69YN4 1812 aaKnown RBP21.9■■□□□ 1.1
CTSB-213ENST00000527215 KCNQ4P56696 695 aa21.89■■□□□ 1.09
CTSB-213ENST00000527215 NKX1-1Q15270 411 aaPredicted RBP21.89■■□□□ 1.09
CTSB-213ENST00000527215 ZNF827Q17R98 1081 aa21.89■■□□□ 1.09
CTSB-213ENST00000527215 NPC1L1Q9UHC9 1359 aa21.88■■□□□ 1.09
CTSB-213ENST00000527215 MTHFSP49914 203 aa21.88■■□□□ 1.09
CTSB-213ENST00000527215 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
CTSB-213ENST00000527215 ZBTB7AO95365 584 aa21.87■■□□□ 1.09
CTSB-213ENST00000527215 PHKG2P15735 406 aa21.87■■□□□ 1.09
CTSB-213ENST00000527215 IL13P35225 146 aa21.87■■□□□ 1.09
CTSB-213ENST00000527215 CNGB1Q14028 1251 aaPredicted RBP21.87■■□□□ 1.09
CTSB-213ENST00000527215 AEBP1Q8IUX7 1158 aa21.87■■□□□ 1.09
CTSB-213ENST00000527215 IFNL2Q8IZJ0 200 aa21.87■■□□□ 1.09
CTSB-213ENST00000527215 CCNL1Q9UK58 526 aaPredicted RBP21.86■■□□□ 1.09
CTSB-213ENST00000527215 AKT1S1Q96B36 256 aa21.85■■□□□ 1.09
CTSB-213ENST00000527215 PALLDQ8WX93 1383 aa21.85■■□□□ 1.09
CTSB-213ENST00000527215 MTFR1LQ9H019 292 aa21.84■■□□□ 1.09
CTSB-213ENST00000527215 KDRP35968 1356 aa21.84■■□□□ 1.09
CTSB-213ENST00000527215 SCN11AQ9UI33 1791 aa21.84■■□□□ 1.09
CTSB-213ENST00000527215 PLEKHO1Q53GL0 409 aaPredicted RBP21.83■■□□□ 1.09
CTSB-213ENST00000527215 SULT6B1Q6IMI4 303 aa21.83■■□□□ 1.09
CTSB-213ENST00000527215 COL24A1Q17RW2 1714 aa21.83■■□□□ 1.08
CTSB-213ENST00000527215 YY1P25490 414 aa21.82■■□□□ 1.08
CTSB-213ENST00000527215 PIGBQ92521 554 aa21.82■■□□□ 1.08
CTSB-213ENST00000527215 ATF5Q9Y2D1 282 aaPredicted RBP21.82■■□□□ 1.08
CTSB-213ENST00000527215 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
CTSB-213ENST00000527215 COL3A1P02461 1466 aaPredicted RBP21.81■■□□□ 1.08
CTSB-213ENST00000527215 PTGER2P43116 358 aa21.8■■□□□ 1.08
CTSB-213ENST00000527215 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
CTSB-213ENST00000527215 ZNF530Q6P9A1 599 aaPredicted RBP21.8■■□□□ 1.08
CTSB-213ENST00000527215 TMOD3Q9NYL9 352 aa21.8■■□□□ 1.08
CTSB-213ENST00000527215 SMARCC1Q92922 1105 aaPredicted RBP21.79■■□□□ 1.08
CTSB-213ENST00000527215 TFCP2L1Q9NZI6 479 aa21.79■■□□□ 1.08
CTSB-213ENST00000527215 UBR3Q6ZT12 1888 aa21.79■■□□□ 1.08
CTSB-213ENST00000527215 PNPLA7Q6ZV29 1317 aa21.79■■□□□ 1.08
CTSB-213ENST00000527215 DIAPH1O60610 1272 aaKnown RBP21.78■■□□□ 1.08
CTSB-213ENST00000527215 KDM6AO15550 1401 aaPredicted RBP21.78■■□□□ 1.08
CTSB-213ENST00000527215 HSP90AB1P08238 724 aaKnown RBP21.77■■□□□ 1.08
CTSB-213ENST00000527215 HMOX1P09601 288 aa21.76■■□□□ 1.07
CTSB-213ENST00000527215 DCAF5Q96JK2 942 aa21.76■■□□□ 1.07
CTSB-213ENST00000527215 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
CTSB-213ENST00000527215 C1orf141Q5JVX7 400 aa21.75■■□□□ 1.07
CTSB-213ENST00000527215 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
CTSB-213ENST00000527215 ERVV-2B6SEH9 535 aa21.74■■□□□ 1.07
CTSB-213ENST00000527215 SGIP1Q9BQI5 828 aa21.74■■□□□ 1.07
CTSB-213ENST00000527215 FHDC1Q9C0D6 1143 aaPredicted RBP21.74■■□□□ 1.07
CTSB-213ENST00000527215 COL5A3P25940 1745 aaPredicted RBP21.73■■□□□ 1.07
CTSB-213ENST00000527215 LOC102724428A0A0B4J2F2 783 aa21.72■■□□□ 1.07
CTSB-213ENST00000527215 SIK1P57059 783 aa21.72■■□□□ 1.07
CTSB-213ENST00000527215 SLC16A10Q8TF71 515 aa21.72■■□□□ 1.07
CTSB-213ENST00000527215 ARXQ96QS3 562 aa21.72■■□□□ 1.07
CTSB-213ENST00000527215 ATG3Q9NT62 314 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms