RNA–Protein interactions for RNA: ENST00000527056.5

MS4A4A-203, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 5

Gene MS4A4A, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-203ENST00000527056 RGPD2P0DJD1 1756 aa17.59■□□□□ 0.41
MS4A4A-203ENST00000527056 RREB1Q92766 1687 aa17.59■□□□□ 0.41
MS4A4A-203ENST00000527056 MEGF6O75095 1541 aa17.59■□□□□ 0.41
MS4A4A-203ENST00000527056 TXNRD1Q16881 649 aa17.57■□□□□ 0.4
MS4A4A-203ENST00000527056 NUP188Q5SRE5 1749 aa17.57■□□□□ 0.4
MS4A4A-203ENST00000527056 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
MS4A4A-203ENST00000527056 NHSQ6T4R5 1651 aa17.56■□□□□ 0.4
MS4A4A-203ENST00000527056 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
MS4A4A-203ENST00000527056 MAP2P11137 1827 aaKnown RBP17.56■□□□□ 0.4
MS4A4A-203ENST00000527056 RGPD3A6NKT7 1758 aaPredicted RBP17.56■□□□□ 0.4
MS4A4A-203ENST00000527056 RGPD4Q7Z3J3 1758 aa17.56■□□□□ 0.4
MS4A4A-203ENST00000527056 PROM2Q8N271 834 aa17.55■□□□□ 0.4
MS4A4A-203ENST00000527056 EYA1Q99502 592 aa17.54■□□□□ 0.4
MS4A4A-203ENST00000527056 PCDH11XQ9BZA7 1347 aa17.53■□□□□ 0.4
MS4A4A-203ENST00000527056 PCDH11YQ9BZA8 1340 aa17.53■□□□□ 0.4
MS4A4A-203ENST00000527056 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
MS4A4A-203ENST00000527056 EIF4A2Q14240 407 aaKnown RBP17.53■□□□□ 0.4
MS4A4A-203ENST00000527056 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
MS4A4A-203ENST00000527056 STK32BQ9NY57 414 aa17.52■□□□□ 0.4
MS4A4A-203ENST00000527056 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.39
MS4A4A-203ENST00000527056 ANO8Q9HCE9 1232 aaPredicted RBP17.51■□□□□ 0.39
MS4A4A-203ENST00000527056 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
MS4A4A-203ENST00000527056 LRP5O75197 1615 aa17.5■□□□□ 0.39
MS4A4A-203ENST00000527056 NCAPD2Q15021 1401 aa17.49■□□□□ 0.39
MS4A4A-203ENST00000527056 BTAF1O14981 1849 aa17.49■□□□□ 0.39
MS4A4A-203ENST00000527056 SHANK3Q9BYB0 1731 aa17.48■□□□□ 0.39
MS4A4A-203ENST00000527056 CYP27B1O15528 508 aa17.48■□□□□ 0.39
MS4A4A-203ENST00000527056 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
MS4A4A-203ENST00000527056 SLC15A2Q16348 729 aa17.48■□□□□ 0.39
MS4A4A-203ENST00000527056 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
MS4A4A-203ENST00000527056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.47■□□□□ 0.39
MS4A4A-203ENST00000527056 DOT1LQ8TEK3 1739 aa17.47■□□□□ 0.39
MS4A4A-203ENST00000527056 SLC27A3Q5K4L6 730 aa17.46■□□□□ 0.39
MS4A4A-203ENST00000527056 SPON1Q9HCB6 807 aa17.46■□□□□ 0.39
MS4A4A-203ENST00000527056 IGSF1Q8N6C5 1336 aa17.46■□□□□ 0.38
MS4A4A-203ENST00000527056 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
MS4A4A-203ENST00000527056 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
MS4A4A-203ENST00000527056 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
MS4A4A-203ENST00000527056 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
MS4A4A-203ENST00000527056 MTHFSP49914 203 aa17.43■□□□□ 0.38
MS4A4A-203ENST00000527056 NKX1-1Q15270 411 aaPredicted RBP17.43■□□□□ 0.38
MS4A4A-203ENST00000527056 PKD1L3Q7Z443 1732 aa17.42■□□□□ 0.38
MS4A4A-203ENST00000527056 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
MS4A4A-203ENST00000527056 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
MS4A4A-203ENST00000527056 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
MS4A4A-203ENST00000527056 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
MS4A4A-203ENST00000527056 PHKG2P15735 406 aa17.41■□□□□ 0.38
MS4A4A-203ENST00000527056 IL13P35225 146 aa17.41■□□□□ 0.38
MS4A4A-203ENST00000527056 CCNL1Q9UK58 526 aaPredicted RBP17.41■□□□□ 0.38
MS4A4A-203ENST00000527056 ZBTB7AO95365 584 aa17.4■□□□□ 0.38
MS4A4A-203ENST00000527056 KCNQ4P56696 695 aa17.4■□□□□ 0.38
MS4A4A-203ENST00000527056 ZNF827Q17R98 1081 aa17.4■□□□□ 0.38
MS4A4A-203ENST00000527056 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
MS4A4A-203ENST00000527056 SULT6B1Q6IMI4 303 aa17.4■□□□□ 0.38
MS4A4A-203ENST00000527056 PDGFDQ9GZP0 370 aaPredicted RBP17.4■□□□□ 0.38
MS4A4A-203ENST00000527056 SRCAPQ6ZRS2 3230 aa17.4■□□□□ 0.38
MS4A4A-203ENST00000527056 HMGB2P26583 209 aaKnown RBP17.39■□□□□ 0.37
MS4A4A-203ENST00000527056 AEBP1Q8IUX7 1158 aa17.39■□□□□ 0.37
MS4A4A-203ENST00000527056 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
MS4A4A-203ENST00000527056 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
MS4A4A-203ENST00000527056 ZNF530Q6P9A1 599 aaPredicted RBP17.38■□□□□ 0.37
MS4A4A-203ENST00000527056 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
MS4A4A-203ENST00000527056 TMOD3Q9NYL9 352 aa17.38■□□□□ 0.37
MS4A4A-203ENST00000527056 PALLDQ8WX93 1383 aa17.38■□□□□ 0.37
MS4A4A-203ENST00000527056 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
MS4A4A-203ENST00000527056 DIAPH1O60610 1272 aaKnown RBP17.37■□□□□ 0.37
MS4A4A-203ENST00000527056 PIGBQ92521 554 aa17.37■□□□□ 0.37
MS4A4A-203ENST00000527056 TFCP2L1Q9NZI6 479 aa17.37■□□□□ 0.37
MS4A4A-203ENST00000527056 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
MS4A4A-203ENST00000527056 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
MS4A4A-203ENST00000527056 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
MS4A4A-203ENST00000527056 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
MS4A4A-203ENST00000527056 LY75O60449 1722 aa17.35■□□□□ 0.37
MS4A4A-203ENST00000527056 DCAF5Q96JK2 942 aa17.35■□□□□ 0.37
MS4A4A-203ENST00000527056 KDRP35968 1356 aa17.34■□□□□ 0.37
MS4A4A-203ENST00000527056 TOGARAM1Q9Y4F4 1720 aa17.34■□□□□ 0.37
MS4A4A-203ENST00000527056 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
MS4A4A-203ENST00000527056 HMOX1P09601 288 aa17.33■□□□□ 0.36
MS4A4A-203ENST00000527056 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
MS4A4A-203ENST00000527056 ITGB4P16144 1822 aa17.32■□□□□ 0.36
MS4A4A-203ENST00000527056 PNPLA7Q6ZV29 1317 aa17.31■□□□□ 0.36
MS4A4A-203ENST00000527056 PTGER2P43116 358 aa17.31■□□□□ 0.36
MS4A4A-203ENST00000527056 CABP4P57796 275 aa17.31■□□□□ 0.36
MS4A4A-203ENST00000527056 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
MS4A4A-203ENST00000527056 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
MS4A4A-203ENST00000527056 LOC102724428A0A0B4J2F2 783 aa17.3■□□□□ 0.36
MS4A4A-203ENST00000527056 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
MS4A4A-203ENST00000527056 SIK1P57059 783 aa17.3■□□□□ 0.36
MS4A4A-203ENST00000527056 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
MS4A4A-203ENST00000527056 ATP6V1AP38606 617 aa17.28■□□□□ 0.36
MS4A4A-203ENST00000527056 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
MS4A4A-203ENST00000527056 AK7Q96M32 723 aa17.28■□□□□ 0.36
MS4A4A-203ENST00000527056 KDM6AO15550 1401 aaPredicted RBP17.28■□□□□ 0.36
MS4A4A-203ENST00000527056 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
MS4A4A-203ENST00000527056 POLD1P28340 1107 aa17.27■□□□□ 0.36
MS4A4A-203ENST00000527056 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
MS4A4A-203ENST00000527056 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
MS4A4A-203ENST00000527056 COL23A1Q86Y22 540 aaPredicted RBP17.26■□□□□ 0.35
MS4A4A-203ENST00000527056 ARXQ96QS3 562 aa17.26■□□□□ 0.35
MS4A4A-203ENST00000527056 SGIP1Q9BQI5 828 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms