RNA–Protein interactions for RNA: ENST00000527045.1

FDFT1-211, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-211ENST00000527045 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
FDFT1-211ENST00000527045 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
FDFT1-211ENST00000527045 PCNTO95613 3336 aa12.86□□□□□ -0.35
FDFT1-211ENST00000527045 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
FDFT1-211ENST00000527045 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
FDFT1-211ENST00000527045 USP6P35125 1406 aa12.86□□□□□ -0.35
FDFT1-211ENST00000527045 CSB-PGBD3P0DP91 1061 aa12.85□□□□□ -0.35
FDFT1-211ENST00000527045 KLRG1Q96E93 195 aa12.85□□□□□ -0.35
FDFT1-211ENST00000527045 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
FDFT1-211ENST00000527045 KCNQ4P56696 695 aa12.84□□□□□ -0.35
FDFT1-211ENST00000527045 HTRA3P83110 453 aa12.84□□□□□ -0.35
FDFT1-211ENST00000527045 CARD10Q9BWT7 1032 aa12.84□□□□□ -0.35
FDFT1-211ENST00000527045 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
FDFT1-211ENST00000527045 PLEKHG3A1L390 1219 aa12.83□□□□□ -0.36
FDFT1-211ENST00000527045 SLIT3O75094 1523 aa12.83□□□□□ -0.36
FDFT1-211ENST00000527045 NLRP6P59044 892 aa12.82□□□□□ -0.36
FDFT1-211ENST00000527045 MSL1Q68DK7 614 aa12.82□□□□□ -0.36
FDFT1-211ENST00000527045 MPHOSPH9Q99550 1183 aa12.82□□□□□ -0.36
FDFT1-211ENST00000527045 TRPM1Q7Z4N2 1603 aa12.81□□□□□ -0.36
FDFT1-211ENST00000527045 TOMM70O94826 608 aa12.81□□□□□ -0.36
FDFT1-211ENST00000527045 ABCC6O95255 1503 aa12.81□□□□□ -0.36
FDFT1-211ENST00000527045 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
FDFT1-211ENST00000527045 SLC27A3Q5K4L6 730 aa12.8□□□□□ -0.36
FDFT1-211ENST00000527045 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
FDFT1-211ENST00000527045 PIK3C2AO00443 1686 aa12.78□□□□□ -0.36
FDFT1-211ENST00000527045 SOX12O15370 315 aa12.78□□□□□ -0.36
FDFT1-211ENST00000527045 COL23A1Q86Y22 540 aaPredicted RBP12.78□□□□□ -0.36
FDFT1-211ENST00000527045 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
FDFT1-211ENST00000527045 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
FDFT1-211ENST00000527045 CCDC7Q96M83 1385 aa12.78□□□□□ -0.36
FDFT1-211ENST00000527045 LY75O60449 1722 aa12.76□□□□□ -0.37
FDFT1-211ENST00000527045 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
FDFT1-211ENST00000527045 ARHGEF25Q86VW2 580 aa12.76□□□□□ -0.37
FDFT1-211ENST00000527045 IGSF1Q8N6C5 1336 aa12.75□□□□□ -0.37
FDFT1-211ENST00000527045 NMRK2Q9NPI5 230 aa12.75□□□□□ -0.37
FDFT1-211ENST00000527045 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
FDFT1-211ENST00000527045 IL2RBP14784 551 aa12.72□□□□□ -0.37
FDFT1-211ENST00000527045 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
FDFT1-211ENST00000527045 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
FDFT1-211ENST00000527045 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
FDFT1-211ENST00000527045 NLRP2Q9NX02 1062 aa12.72□□□□□ -0.37
FDFT1-211ENST00000527045 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
FDFT1-211ENST00000527045 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.37
FDFT1-211ENST00000527045 HSPA1AP0DMV8 641 aaKnown RBP12.71□□□□□ -0.37
FDFT1-211ENST00000527045 HSPA1BP0DMV9 641 aaKnown RBP12.71□□□□□ -0.37
FDFT1-211ENST00000527045 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
FDFT1-211ENST00000527045 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
FDFT1-211ENST00000527045 CCNL1Q9UK58 526 aaPredicted RBP12.71□□□□□ -0.37
FDFT1-211ENST00000527045 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
FDFT1-211ENST00000527045 C16orf71Q8IYS4 520 aaPredicted RBP12.7□□□□□ -0.38
FDFT1-211ENST00000527045 KCNH5Q8NCM2 988 aa12.7□□□□□ -0.38
FDFT1-211ENST00000527045 DDX54Q8TDD1 881 aaKnown RBP12.7□□□□□ -0.38
FDFT1-211ENST00000527045 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
FDFT1-211ENST00000527045 CABP1Q9NZU7 370 aa12.69□□□□□ -0.38
FDFT1-211ENST00000527045 NFAT5O94916 1531 aa12.68□□□□□ -0.38
FDFT1-211ENST00000527045 C5P01031 1676 aa12.68□□□□□ -0.38
FDFT1-211ENST00000527045 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
FDFT1-211ENST00000527045 FSTL1Q12841 308 aa12.67□□□□□ -0.38
FDFT1-211ENST00000527045 NSD2O96028 1365 aa12.67□□□□□ -0.38
FDFT1-211ENST00000527045 LTN1O94822 1766 aa12.66□□□□□ -0.38
FDFT1-211ENST00000527045 ERBB3P21860 1342 aa12.66□□□□□ -0.38
FDFT1-211ENST00000527045 TAF1LQ8IZX4 1826 aa12.66□□□□□ -0.38
FDFT1-211ENST00000527045 ANKRD36BQ8N2N9 1353 aa12.66□□□□□ -0.38
FDFT1-211ENST00000527045 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
FDFT1-211ENST00000527045 PRR29P0C7W0 189 aa12.65□□□□□ -0.38
FDFT1-211ENST00000527045 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
FDFT1-211ENST00000527045 TTC21BQ7Z4L5 1316 aa12.64□□□□□ -0.39
FDFT1-211ENST00000527045 ARHGAP27Q6ZUM4 889 aa12.63□□□□□ -0.39
FDFT1-211ENST00000527045 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
FDFT1-211ENST00000527045 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
FDFT1-211ENST00000527045 PKD1L3Q7Z443 1732 aa12.62□□□□□ -0.39
FDFT1-211ENST00000527045 USP47Q96K76 1375 aa12.62□□□□□ -0.39
FDFT1-211ENST00000527045 SMIM5Q71RC9 77 aa12.62□□□□□ -0.39
FDFT1-211ENST00000527045 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
FDFT1-211ENST00000527045 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
FDFT1-211ENST00000527045 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
FDFT1-211ENST00000527045 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
FDFT1-211ENST00000527045 GABBR2O75899 941 aa12.61□□□□□ -0.39
FDFT1-211ENST00000527045 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
FDFT1-211ENST00000527045 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
FDFT1-211ENST00000527045 PHF14O94880 888 aa12.6□□□□□ -0.39
FDFT1-211ENST00000527045 RRAGCQ9HB90 399 aa12.6□□□□□ -0.39
FDFT1-211ENST00000527045 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
FDFT1-211ENST00000527045 C4BP0C0L5 1744 aa12.59□□□□□ -0.39
FDFT1-211ENST00000527045 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
FDFT1-211ENST00000527045 TNRC6CQ9HCJ0 1690 aaKnown RBP12.59□□□□□ -0.39
FDFT1-211ENST00000527045 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
FDFT1-211ENST00000527045 SMC1BQ8NDV3 1235 aa12.59□□□□□ -0.39
FDFT1-211ENST00000527045 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
FDFT1-211ENST00000527045 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
FDFT1-211ENST00000527045 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
FDFT1-211ENST00000527045 KDM2BQ8NHM5 1336 aa12.58□□□□□ -0.4
FDFT1-211ENST00000527045 PLEKHG2Q9H7P9 1386 aa12.57□□□□□ -0.4
FDFT1-211ENST00000527045 KIAA1210Q9ULL0 1709 aa12.57□□□□□ -0.4
FDFT1-211ENST00000527045 A0A0G2JLW4 131 aa12.57□□□□□ -0.4
FDFT1-211ENST00000527045 MLLT1Q03111 559 aaPredicted RBP12.57□□□□□ -0.4
FDFT1-211ENST00000527045 NBPF1Q3BBV0 1214 aa12.57□□□□□ -0.4
FDFT1-211ENST00000527045 AK7Q96M32 723 aa12.57□□□□□ -0.4
FDFT1-211ENST00000527045 BRCA1P38398 1863 aaKnown RBP12.57□□□□□ -0.4
FDFT1-211ENST00000527045 RGPD2P0DJD1 1756 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms