RNA–Protein interactions for RNA: ENST00000527029.1

ALKBH3-203, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 2

Gene ALKBH3, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-203ENST00000527029 COL23A1Q86Y22 540 aaPredicted RBP21.61■■□□□ 1.05
ALKBH3-203ENST00000527029 MON2Q7Z3U7 1717 aa21.6■■□□□ 1.05
ALKBH3-203ENST00000527029 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
ALKBH3-203ENST00000527029 NME9Q86XW9 330 aa21.6■■□□□ 1.05
ALKBH3-203ENST00000527029 ZNF526Q8TF50 670 aaPredicted RBP21.6■■□□□ 1.05
ALKBH3-203ENST00000527029 ADCY9O60503 1353 aa21.6■■□□□ 1.05
ALKBH3-203ENST00000527029 USP54Q70EL1 1684 aa21.6■■□□□ 1.05
ALKBH3-203ENST00000527029 MSL1Q68DK7 614 aa21.59■■□□□ 1.05
ALKBH3-203ENST00000527029 ANKRD36BQ8N2N9 1353 aa21.59■■□□□ 1.05
ALKBH3-203ENST00000527029 NSD2O96028 1365 aa21.58■■□□□ 1.04
ALKBH3-203ENST00000527029 CCNL1Q9UK58 526 aaPredicted RBP21.57■■□□□ 1.04
ALKBH3-203ENST00000527029 DOT1LQ8TEK3 1739 aa21.56■■□□□ 1.04
ALKBH3-203ENST00000527029 CD2APQ9Y5K6 639 aa21.56■■□□□ 1.04
ALKBH3-203ENST00000527029 SIN3AQ96ST3 1273 aa21.55■■□□□ 1.04
ALKBH3-203ENST00000527029 SBNO2Q9Y2G9 1366 aa21.55■■□□□ 1.04
ALKBH3-203ENST00000527029 LTV1Q96GA3 475 aaPredicted RBP21.53■■□□□ 1.04
ALKBH3-203ENST00000527029 IP6K1Q92551 441 aa21.52■■□□□ 1.04
ALKBH3-203ENST00000527029 CD163L1Q9NR16 1453 aa21.52■■□□□ 1.03
ALKBH3-203ENST00000527029 L3MBTL2Q969R5 705 aa21.5■■□□□ 1.03
ALKBH3-203ENST00000527029 FAM208AQ9UK61 1670 aaKnown RBP21.5■■□□□ 1.03
ALKBH3-203ENST00000527029 KIF3CO14782 793 aa21.49■■□□□ 1.03
ALKBH3-203ENST00000527029 ZCRB1Q8TBF4 217 aaKnown RBP21.49■■□□□ 1.03
ALKBH3-203ENST00000527029 USP47Q96K76 1375 aa21.48■■□□□ 1.03
ALKBH3-203ENST00000527029 ROCK2O75116 1388 aaKnown RBP21.48■■□□□ 1.03
ALKBH3-203ENST00000527029 WWC3Q9ULE0 1092 aa21.47■■□□□ 1.03
ALKBH3-203ENST00000527029 C5P01031 1676 aa21.46■■□□□ 1.03
ALKBH3-203ENST00000527029 HDGFL2Q7Z4V5 671 aaPredicted RBP21.45■■□□□ 1.02
ALKBH3-203ENST00000527029 TMC1Q8TDI8 760 aa21.45■■□□□ 1.02
ALKBH3-203ENST00000527029 IGSF1Q8N6C5 1336 aa21.45■■□□□ 1.02
ALKBH3-203ENST00000527029 EDC4Q6P2E9 1401 aaKnown RBP21.45■■□□□ 1.02
ALKBH3-203ENST00000527029 MEGF6O75095 1541 aa21.45■■□□□ 1.02
ALKBH3-203ENST00000527029 RGPD2P0DJD1 1756 aa21.44■■□□□ 1.02
ALKBH3-203ENST00000527029 APLP1P51693 650 aa21.44■■□□□ 1.02
ALKBH3-203ENST00000527029 DIEXFQ68CQ4 756 aaKnown RBP21.44■■□□□ 1.02
ALKBH3-203ENST00000527029 FLAD1Q8NFF5 587 aa21.44■■□□□ 1.02
ALKBH3-203ENST00000527029 SLC12A5Q9H2X9 1139 aa21.44■■□□□ 1.02
ALKBH3-203ENST00000527029 DNAJC5GQ8N7S2 189 aa21.43■■□□□ 1.02
ALKBH3-203ENST00000527029 TAF1LQ8IZX4 1826 aa21.42■■□□□ 1.02
ALKBH3-203ENST00000527029 MAP3K19Q56UN5 1328 aa21.4■■□□□ 1.02
ALKBH3-203ENST00000527029 HOXC9P31274 260 aa21.4■■□□□ 1.02
ALKBH3-203ENST00000527029 AMIGO3Q86WK7 504 aa21.4■■□□□ 1.02
ALKBH3-203ENST00000527029 A0A1W2PP64 1363 aa21.39■■□□□ 1.02
ALKBH3-203ENST00000527029 FBLN1P23142 703 aa21.39■■□□□ 1.01
ALKBH3-203ENST00000527029 TERF2IPQ9NYB0 399 aa21.38■■□□□ 1.01
ALKBH3-203ENST00000527029 PALLDQ8WX93 1383 aa21.37■■□□□ 1.01
ALKBH3-203ENST00000527029 HMGB2P26583 209 aaKnown RBP21.37■■□□□ 1.01
ALKBH3-203ENST00000527029 AMPHP49418 695 aa21.37■■□□□ 1.01
ALKBH3-203ENST00000527029 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
ALKBH3-203ENST00000527029 C4BP0C0L5 1744 aa21.36■■□□□ 1.01
ALKBH3-203ENST00000527029 TOGARAM1Q9Y4F4 1720 aa21.36■■□□□ 1.01
ALKBH3-203ENST00000527029 TOMM70O94826 608 aa21.36■■□□□ 1.01
ALKBH3-203ENST00000527029 NBPF6Q5VWK0 638 aa21.35■■□□□ 1.01
ALKBH3-203ENST00000527029 AK7Q96M32 723 aa21.35■■□□□ 1.01
ALKBH3-203ENST00000527029 NBPF4Q96M43 638 aa21.35■■□□□ 1.01
ALKBH3-203ENST00000527029 UBR3Q6ZT12 1888 aa21.35■■□□□ 1.01
ALKBH3-203ENST00000527029 PCNTO95613 3336 aa21.34■■□□□ 1.01
ALKBH3-203ENST00000527029 CGNL1Q0VF96 1302 aa21.34■■□□□ 1.01
ALKBH3-203ENST00000527029 CICQ96RK0 1608 aaPredicted RBP21.34■■□□□ 1.01
ALKBH3-203ENST00000527029 PHF14O94880 888 aa21.34■■□□□ 1.01
ALKBH3-203ENST00000527029 MPRIPQ6WCQ1 1025 aa21.34■■□□□ 1.01
ALKBH3-203ENST00000527029 USHBP1Q8N6Y0 703 aa21.34■■□□□ 1.01
ALKBH3-203ENST00000527029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.33■■□□□ 1.01
ALKBH3-203ENST00000527029 COG3Q96JB2 828 aa21.33■■□□□ 1.01
ALKBH3-203ENST00000527029 RAPGEF4Q8WZA2 1011 aa21.32■■□□□ 1
ALKBH3-203ENST00000527029 COL13A1Q5TAT6 717 aaPredicted RBP21.31■■□□□ 1
ALKBH3-203ENST00000527029 TATP17735 454 aaPredicted RBP21.29■■□□□ 1
ALKBH3-203ENST00000527029 SMARCC1Q92922 1105 aaPredicted RBP21.29■■□□□ 1
ALKBH3-203ENST00000527029 NMRK2Q9NPI5 230 aa21.29■■□□□ 1
ALKBH3-203ENST00000527029 WDR90Q96KV7 1748 aa21.29■■□□□ 1
ALKBH3-203ENST00000527029 PCDH11XQ9BZA7 1347 aa21.29■■□□□ 1
ALKBH3-203ENST00000527029 PCDH11YQ9BZA8 1340 aa21.29■■□□□ 1
ALKBH3-203ENST00000527029 ITGB4P16144 1822 aa21.28■■□□□ 1
ALKBH3-203ENST00000527029 SSFA2P28290 1259 aa21.28■■□□□ 1
ALKBH3-203ENST00000527029 NSD3Q9BZ95 1437 aa21.28■■□□□ 1
ALKBH3-203ENST00000527029 RTL1A6NKG5 1358 aa21.27■■□□□ 1
ALKBH3-203ENST00000527029 RRS1Q15050 365 aaKnown RBP21.27■■□□□ 1
ALKBH3-203ENST00000527029 CYP27B1O15528 508 aa21.26■□□□□ 0.99
ALKBH3-203ENST00000527029 CAPN15O75808 1086 aa21.26■□□□□ 0.99
ALKBH3-203ENST00000527029 HTRA3P83110 453 aa21.26■□□□□ 0.99
ALKBH3-203ENST00000527029 KLRG1Q96E93 195 aa21.26■□□□□ 0.99
ALKBH3-203ENST00000527029 PUS7Q96PZ0 661 aaKnown RBP21.26■□□□□ 0.99
ALKBH3-203ENST00000527029 CARD11Q9BXL7 1154 aa21.26■□□□□ 0.99
ALKBH3-203ENST00000527029 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
ALKBH3-203ENST00000527029 LINC00116Q8NCU8 138 aa21.25■□□□□ 0.99
ALKBH3-203ENST00000527029 BCS1LQ9Y276 419 aa21.25■□□□□ 0.99
ALKBH3-203ENST00000527029 KIAA1551Q9HCM1 1747 aa21.24■□□□□ 0.99
ALKBH3-203ENST00000527029 N4BP2Q86UW6 1770 aaPredicted RBP21.24■□□□□ 0.99
ALKBH3-203ENST00000527029 JMYQ8N9B5 988 aa21.24■□□□□ 0.99
ALKBH3-203ENST00000527029 RBM46Q8TBY0 533 aaKnown RBP21.24■□□□□ 0.99
ALKBH3-203ENST00000527029 PIGBQ92521 554 aa21.24■□□□□ 0.99
ALKBH3-203ENST00000527029 MAP2P11137 1827 aaKnown RBP21.24■□□□□ 0.99
ALKBH3-203ENST00000527029 KIF13BQ9NQT8 1826 aa21.24■□□□□ 0.99
ALKBH3-203ENST00000527029 SMG6Q86US8 1419 aaKnown RBP21.23■□□□□ 0.99
ALKBH3-203ENST00000527029 MMP10P09238 476 aa21.23■□□□□ 0.99
ALKBH3-203ENST00000527029 ARHGAP27Q6ZUM4 889 aa21.23■□□□□ 0.99
ALKBH3-203ENST00000527029 LOC102724428A0A0B4J2F2 783 aa21.22■□□□□ 0.99
ALKBH3-203ENST00000527029 A0A0G2JLW4 131 aa21.22■□□□□ 0.99
ALKBH3-203ENST00000527029 SIK1P57059 783 aa21.22■□□□□ 0.99
ALKBH3-203ENST00000527029 TGFB2P61812 414 aa21.21■□□□□ 0.99
ALKBH3-203ENST00000527029 EIF4G2P78344 907 aaKnown RBP eCLIP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms