RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 NSD2O96028 1365 aa26.36■■□□□ 1.81
CAPN1-206ENST00000526966 AMPHP49418 695 aa26.36■■□□□ 1.81
CAPN1-206ENST00000526966 ARXQ96QS3 562 aa26.36■■□□□ 1.81
CAPN1-206ENST00000526966 KIF20BQ96Q89 1820 aa26.35■■□□□ 1.81
CAPN1-206ENST00000526966 PRIM1P49642 420 aaKnown RBP26.32■■□□□ 1.8
CAPN1-206ENST00000526966 ZCRB1Q8TBF4 217 aaKnown RBP26.32■■□□□ 1.8
CAPN1-206ENST00000526966 SLC16A10Q8TF71 515 aa26.32■■□□□ 1.8
CAPN1-206ENST00000526966 PNPLA7Q6ZV29 1317 aa26.32■■□□□ 1.8
CAPN1-206ENST00000526966 FYB1O15117 783 aa26.31■■□□□ 1.8
CAPN1-206ENST00000526966 USP47Q96K76 1375 aa26.31■■□□□ 1.8
CAPN1-206ENST00000526966 SYTL4Q96C24 671 aaPredicted RBP26.3■■□□□ 1.8
CAPN1-206ENST00000526966 TMF1P82094 1093 aa26.29■■□□□ 1.8
CAPN1-206ENST00000526966 RRS1Q15050 365 aaKnown RBP26.29■■□□□ 1.8
CAPN1-206ENST00000526966 NBPF6Q5VWK0 638 aa26.29■■□□□ 1.8
CAPN1-206ENST00000526966 NBPF4Q96M43 638 aa26.29■■□□□ 1.8
CAPN1-206ENST00000526966 GGNBP2Q9H3C7 697 aa26.28■■□□□ 1.8
CAPN1-206ENST00000526966 CGNL1Q0VF96 1302 aa26.28■■□□□ 1.8
CAPN1-206ENST00000526966 ZNF784Q8NCA9 323 aaPredicted RBP26.27■■□□□ 1.8
CAPN1-206ENST00000526966 SMG6Q86US8 1419 aaKnown RBP26.27■■□□□ 1.8
CAPN1-206ENST00000526966 KCNQ4P56696 695 aa26.26■■□□□ 1.79
CAPN1-206ENST00000526966 INSRP06213 1382 aa26.24■■□□□ 1.79
CAPN1-206ENST00000526966 KIF24Q5T7B8 1368 aa26.24■■□□□ 1.79
CAPN1-206ENST00000526966 TFCP2L1Q9NZI6 479 aa26.24■■□□□ 1.79
CAPN1-206ENST00000526966 C5P01031 1676 aa26.23■■□□□ 1.79
CAPN1-206ENST00000526966 USHBP1Q8N6Y0 703 aa26.23■■□□□ 1.79
CAPN1-206ENST00000526966 GOLGB1Q14789 3259 aaKnown RBP26.23■■□□□ 1.79
CAPN1-206ENST00000526966 TAF1LQ8IZX4 1826 aa26.23■■□□□ 1.79
CAPN1-206ENST00000526966 FLT4P35916 1363 aa26.22■■□□□ 1.79
CAPN1-206ENST00000526966 POLD1P28340 1107 aa26.22■■□□□ 1.79
CAPN1-206ENST00000526966 RAPGEF4Q8WZA2 1011 aa26.22■■□□□ 1.79
CAPN1-206ENST00000526966 CCNL1Q9UK58 526 aaPredicted RBP26.22■■□□□ 1.79
CAPN1-206ENST00000526966 PKD1L3Q7Z443 1732 aa26.21■■□□□ 1.79
CAPN1-206ENST00000526966 ANKRD26Q9UPS8 1709 aa26.21■■□□□ 1.79
CAPN1-206ENST00000526966 HSP90AB2PQ58FF8 381 aa26.2■■□□□ 1.78
CAPN1-206ENST00000526966 TOGARAM1Q9Y4F4 1720 aa26.19■■□□□ 1.78
CAPN1-206ENST00000526966 ITGB4P16144 1822 aa26.19■■□□□ 1.78
CAPN1-206ENST00000526966 CDCA8Q53HL2 280 aa26.19■■□□□ 1.78
CAPN1-206ENST00000526966 PCDH11XQ9BZA7 1347 aa26.18■■□□□ 1.78
CAPN1-206ENST00000526966 PCDH11YQ9BZA8 1340 aa26.18■■□□□ 1.78
CAPN1-206ENST00000526966 TATP17735 454 aaPredicted RBP26.18■■□□□ 1.78
CAPN1-206ENST00000526966 NCAPD2Q15021 1401 aa26.16■■□□□ 1.78
CAPN1-206ENST00000526966 GPR162Q16538 588 aa26.15■■□□□ 1.78
CAPN1-206ENST00000526966 NSD3Q9BZ95 1437 aa26.14■■□□□ 1.78
CAPN1-206ENST00000526966 KLHL34Q8N239 644 aa26.14■■□□□ 1.78
CAPN1-206ENST00000526966 CARD14Q9BXL6 1004 aa26.14■■□□□ 1.78
CAPN1-206ENST00000526966 COL23A1Q86Y22 540 aaPredicted RBP26.13■■□□□ 1.77
CAPN1-206ENST00000526966 MAP2P11137 1827 aaKnown RBP26.12■■□□□ 1.77
CAPN1-206ENST00000526966 CYP27B1O15528 508 aa26.12■■□□□ 1.77
CAPN1-206ENST00000526966 NLGN2Q8NFZ4 835 aa26.12■■□□□ 1.77
CAPN1-206ENST00000526966 PALLDQ8WX93 1383 aa26.11■■□□□ 1.77
CAPN1-206ENST00000526966 TRIM26Q12899 539 aaPredicted RBP26.11■■□□□ 1.77
CAPN1-206ENST00000526966 EMILIN1Q9Y6C2 1016 aa26.11■■□□□ 1.77
CAPN1-206ENST00000526966 C4BP0C0L5 1744 aa26.1■■□□□ 1.77
CAPN1-206ENST00000526966 UBR3Q6ZT12 1888 aa26.08■■□□□ 1.77
CAPN1-206ENST00000526966 HMGB2P26583 209 aaKnown RBP26.08■■□□□ 1.77
CAPN1-206ENST00000526966 MSH5O43196 834 aa26.06■■□□□ 1.76
CAPN1-206ENST00000526966 MPRIPQ6WCQ1 1025 aa26.06■■□□□ 1.76
CAPN1-206ENST00000526966 NKX1-1Q15270 411 aaPredicted RBP26.04■■□□□ 1.76
CAPN1-206ENST00000526966 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
CAPN1-206ENST00000526966 FLAD1Q8NFF5 587 aa26.04■■□□□ 1.76
CAPN1-206ENST00000526966 WASHC2AQ641Q2 1341 aa26.04■■□□□ 1.76
CAPN1-206ENST00000526966 MSL1Q68DK7 614 aa26.03■■□□□ 1.76
CAPN1-206ENST00000526966 SMARCC1Q92922 1105 aaPredicted RBP26.03■■□□□ 1.76
CAPN1-206ENST00000526966 TIMELESSQ9UNS1 1208 aa26.03■■□□□ 1.76
CAPN1-206ENST00000526966 YBX3P16989 372 aaKnown RBP eCLIP26.01■■□□□ 1.753e-6■□□□□ 8.1
CAPN1-206ENST00000526966 C1QTNF8P60827 252 aa26.01■■□□□ 1.75
CAPN1-206ENST00000526966 PIGBQ92521 554 aa26■■□□□ 1.75
CAPN1-206ENST00000526966 SPG7Q9UQ90 795 aa26■■□□□ 1.75
CAPN1-206ENST00000526966 PPM1GO15355 546 aaPredicted RBP25.99■■□□□ 1.75
CAPN1-206ENST00000526966 GRIN3BO60391 1043 aa25.99■■□□□ 1.75
CAPN1-206ENST00000526966 EYA1Q99502 592 aa25.99■■□□□ 1.75
CAPN1-206ENST00000526966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.99■■□□□ 1.752e-6■■□□□ 11.9
CAPN1-206ENST00000526966 AMIGO3Q86WK7 504 aa25.98■■□□□ 1.75
CAPN1-206ENST00000526966 CD2APQ9Y5K6 639 aa25.98■■□□□ 1.75
CAPN1-206ENST00000526966 AK7Q96M32 723 aa25.97■■□□□ 1.75
CAPN1-206ENST00000526966 PLEKHG2Q9H7P9 1386 aa25.96■■□□□ 1.75
CAPN1-206ENST00000526966 POLKQ9UBT6 870 aa25.96■■□□□ 1.75
CAPN1-206ENST00000526966 CLSPNQ9HAW4 1339 aa25.93■■□□□ 1.74
CAPN1-206ENST00000526966 SENP3-EIF4A1A0A087X0R7 540 aa25.93■■□□□ 1.74
CAPN1-206ENST00000526966 LOC102724428A0A0B4J2F2 783 aa25.93■■□□□ 1.74
CAPN1-206ENST00000526966 SIK1P57059 783 aa25.93■■□□□ 1.74
CAPN1-206ENST00000526966 GIGYF1O75420 1035 aaPredicted RBP25.92■■□□□ 1.74
CAPN1-206ENST00000526966 PHKG2P15735 406 aa25.92■■□□□ 1.74
CAPN1-206ENST00000526966 SSFA2P28290 1259 aa25.92■■□□□ 1.74
CAPN1-206ENST00000526966 ZNF831Q5JPB2 1677 aa25.91■■□□□ 1.74
CAPN1-206ENST00000526966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.91■■□□□ 1.74
CAPN1-206ENST00000526966 IFNL2Q8IZJ0 200 aa25.91■■□□□ 1.74
CAPN1-206ENST00000526966 LINC00116Q8NCU8 138 aa25.91■■□□□ 1.74
CAPN1-206ENST00000526966 TMOD3Q9NYL9 352 aa25.91■■□□□ 1.74
CAPN1-206ENST00000526966 EIF4A2Q14240 407 aaKnown RBP25.9■■□□□ 1.74
CAPN1-206ENST00000526966 PHF14O94880 888 aa25.89■■□□□ 1.74
CAPN1-206ENST00000526966 SMIM5Q71RC9 77 aa25.89■■□□□ 1.74
CAPN1-206ENST00000526966 ASAP1Q9ULH1 1129 aa25.89■■□□□ 1.74
CAPN1-206ENST00000526966 KDRP35968 1356 aa25.87■■□□□ 1.73
CAPN1-206ENST00000526966 ITPK1Q13572 414 aa25.87■■□□□ 1.73
CAPN1-206ENST00000526966 IGSF1Q8N6C5 1336 aa25.87■■□□□ 1.73
CAPN1-206ENST00000526966 ATP10DQ9P241 1426 aa25.86■■□□□ 1.73
CAPN1-206ENST00000526966 KIF13BQ9NQT8 1826 aa25.86■■□□□ 1.73
CAPN1-206ENST00000526966 COL5A3P25940 1745 aaPredicted RBP25.85■■□□□ 1.73
CAPN1-206ENST00000526966 ADCY9O60503 1353 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms