RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 A0A1W2PRU2 124 aa2.13□□□□□ -2.07
KNL1-203ENST00000526913 TMEM229AB2RXF0 380 aa2.13□□□□□ -2.07
KNL1-203ENST00000526913 WEE1P30291 646 aa2.13□□□□□ -2.07
KNL1-203ENST00000526913 IRS1P35568 1242 aa2.13□□□□□ -2.07
KNL1-203ENST00000526913 TCEAL1Q15170 157 aa2.13□□□□□ -2.07
KNL1-203ENST00000526913 TNS4Q8IZW8 715 aa2.13□□□□□ -2.07
KNL1-203ENST00000526913 PATL2C9JE40 543 aaKnown RBP2.13□□□□□ -2.07
KNL1-203ENST00000526913 LINC01559Q495D7 138 aa2.13□□□□□ -2.07
KNL1-203ENST00000526913 TMED8Q6PL24 325 aaPredicted RBP2.13□□□□□ -2.07
KNL1-203ENST00000526913 BRICD5Q6PL45 260 aa2.13□□□□□ -2.07
KNL1-203ENST00000526913 HINFPQ9BQA5 517 aa2.13□□□□□ -2.07
KNL1-203ENST00000526913 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.13□□□□□ -2.07
KNL1-203ENST00000526913 RAB11FIP3O75154 756 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 MAPK8P45983 427 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 PPP4R3BQ5MIZ7 849 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 LARP1Q6PKG0 1096 aaKnown RBP2.12□□□□□ -2.07
KNL1-203ENST00000526913 PMFBP1Q8TBY8 1022 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 C8orf37Q96NL8 207 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 DCBLD2Q96PD2 775 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 TSPAN10Q9H1Z9 355 aaPredicted RBP2.12□□□□□ -2.07
KNL1-203ENST00000526913 SLC52A1Q9NWF4 448 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 KLHL42Q9P2K6 505 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 TNFRSF10BO14763 440 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 USP46P62068 366 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 USB1Q9BQ65 265 aaKnown RBP2.12□□□□□ -2.07
KNL1-203ENST00000526913 BHMG1C9JSJ3 638 aaPredicted RBP2.12□□□□□ -2.07
KNL1-203ENST00000526913 FMNL1O95466 1100 aaPredicted RBP2.12□□□□□ -2.07
KNL1-203ENST00000526913 SCNN1DP51172 638 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 ORC1Q13415 861 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 SH3BP5LQ7L8J4 393 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 NFATC2IPQ8NCF5 419 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 DCTN4Q9UJW0 460 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 TREHO43280 583 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 DNAJA1P31689 397 aaKnown RBP2.12□□□□□ -2.07
KNL1-203ENST00000526913 GTF2F1P35269 517 aaKnown RBP eCLIP2.12□□□□□ -2.07
KNL1-203ENST00000526913 DSC3Q14574 896 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 SH3RF1Q7Z6J0 888 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 ZFRQ96KR1 1074 aaKnown RBP2.12□□□□□ -2.07
KNL1-203ENST00000526913 PRKAG2Q9UGJ0 569 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 MRPL42Q9Y6G3 142 aaKnown RBP2.12□□□□□ -2.07
KNL1-203ENST00000526913 RBAK-RBAKDNI3L0D1 243 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 SOX11P35716 441 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 COPS2P61201 443 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 TMEM87AQ8NBN3 555 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 MARVELD3Q96A59 401 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 FAM126AQ9BYI3 521 aaPredicted RBP2.12□□□□□ -2.07
KNL1-203ENST00000526913 COPRSQ9NQ92 184 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 VPS9D1Q9Y2B5 631 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 USP20Q9Y2K6 914 aa2.12□□□□□ -2.07
KNL1-203ENST00000526913 ATP5J2-PTCD1G3V325 749 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 VAMP1P23763 118 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 FMR1Q06787 632 aaKnown RBP eCLIP2.11□□□□□ -2.07
KNL1-203ENST00000526913 SWI5Q1ZZU3 235 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 MEI1Q5TIA1 1274 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 LARGE2Q8N3Y3 721 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 SPACA7Q96KW9 195 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 HIRIP3Q9BW71 556 aaPredicted RBP2.11□□□□□ -2.07
KNL1-203ENST00000526913 TANGO6Q9C0B7 1094 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 ANKRD62A6NC57 917 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 EPHA4P54764 986 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 PDE4CQ08493 712 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 COX20Q5RI15 118 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 USPL1Q5W0Q7 1092 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 PPP1R18Q6NYC8 613 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 RGL4Q8IZJ4 473 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 CAPN10Q9HC96 672 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 RAB6BQ9NRW1 208 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 DOLKQ9UPQ8 538 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 IRX6P78412 446 aaPredicted RBP2.11□□□□□ -2.07
KNL1-203ENST00000526913 EHHADHQ08426 723 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 EML3Q32P44 896 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 DESI1Q6ICB0 168 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 RAVER1Q8IY67 606 aaKnown RBP2.11□□□□□ -2.07
KNL1-203ENST00000526913 CHMP7Q8WUX9 453 aaPredicted RBP2.11□□□□□ -2.07
KNL1-203ENST00000526913 UBXN4Q92575 508 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 UNC93B1Q9H1C4 597 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 QTRT2Q9H974 415 aaKnown RBP2.11□□□□□ -2.07
KNL1-203ENST00000526913 TMPRSS4Q9NRS4 437 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 ZNF358Q9NW07 568 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 ESPNB1AK53 854 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 EAPPQ56P03 285 aaPredicted RBP2.11□□□□□ -2.07
KNL1-203ENST00000526913 VARS2Q5ST30 1063 aaKnown RBP2.11□□□□□ -2.07
KNL1-203ENST00000526913 MCF2L2Q86YR7 1114 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 ETFBKMTQ8IXQ9 262 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 C1orf216Q8TAB5 229 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 TRIM56Q9BRZ2 755 aaKnown RBP2.11□□□□□ -2.07
KNL1-203ENST00000526913 RABGEF1Q9UJ41 708 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 PARP3Q9Y6F1 533 aa2.11□□□□□ -2.07
KNL1-203ENST00000526913 ZC3H4Q9UPT8 1303 aaKnown RBP2.11□□□□□ -2.07
KNL1-203ENST00000526913 OPLAHO14841 1288 aa2.1□□□□□ -2.07
KNL1-203ENST00000526913 EIF1AXP47813 144 aaKnown RBP2.1□□□□□ -2.07
KNL1-203ENST00000526913 PSME1Q06323 249 aa2.1□□□□□ -2.07
KNL1-203ENST00000526913 ERFEQ4G0M1 354 aa2.1□□□□□ -2.07
KNL1-203ENST00000526913 BAP1Q92560 729 aa2.1□□□□□ -2.07
KNL1-203ENST00000526913 TBX22Q9Y458 520 aa2.1□□□□□ -2.07
KNL1-203ENST00000526913 PDE6BP35913 854 aa2.1□□□□□ -2.07
KNL1-203ENST00000526913 SEC13P55735 322 aa2.1□□□□□ -2.07
KNL1-203ENST00000526913 FKBP4Q02790 459 aaKnown RBP eCLIP2.1□□□□□ -2.07
KNL1-203ENST00000526913 EGFLAMQ63HQ2 1017 aa2.1□□□□□ -2.07
KNL1-203ENST00000526913 CERS3Q8IU89 383 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms