RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 RRS1Q15050 365 aaKnown RBP25.97■■□□□ 1.75
CDC27-203ENST00000526866 ZCRB1Q8TBF4 217 aaKnown RBP25.97■■□□□ 1.75
CDC27-203ENST00000526866 TUBGCP6Q96RT7 1819 aa25.97■■□□□ 1.75
CDC27-203ENST00000526866 LY75O60449 1722 aa25.97■■□□□ 1.75
CDC27-203ENST00000526866 RTL1A6NKG5 1358 aa25.97■■□□□ 1.75
CDC27-203ENST00000526866 MAP3K5Q99683 1374 aa25.96■■□□□ 1.75
CDC27-203ENST00000526866 FYB1O15117 783 aa25.96■■□□□ 1.75
CDC27-203ENST00000526866 GGNBP2Q9H3C7 697 aa25.96■■□□□ 1.75
CDC27-203ENST00000526866 PNPLA7Q6ZV29 1317 aa25.95■■□□□ 1.74
CDC27-203ENST00000526866 CHD4Q14839 1912 aa25.94■■□□□ 1.74
CDC27-203ENST00000526866 NBPF6Q5VWK0 638 aa25.94■■□□□ 1.74
CDC27-203ENST00000526866 SLC16A10Q8TF71 515 aa25.94■■□□□ 1.74
CDC27-203ENST00000526866 NBPF4Q96M43 638 aa25.94■■□□□ 1.74
CDC27-203ENST00000526866 COL24A1Q17RW2 1714 aa25.94■■□□□ 1.74
CDC27-203ENST00000526866 TMF1P82094 1093 aa25.93■■□□□ 1.74
CDC27-203ENST00000526866 USHBP1Q8N6Y0 703 aa25.93■■□□□ 1.74
CDC27-203ENST00000526866 ZNF784Q8NCA9 323 aaPredicted RBP25.93■■□□□ 1.74
CDC27-203ENST00000526866 TFCP2L1Q9NZI6 479 aa25.92■■□□□ 1.74
CDC27-203ENST00000526866 USP47Q96K76 1375 aa25.92■■□□□ 1.74
CDC27-203ENST00000526866 KIF20BQ96Q89 1820 aa25.9■■□□□ 1.74
CDC27-203ENST00000526866 SMG6Q86US8 1419 aaKnown RBP25.89■■□□□ 1.74
CDC27-203ENST00000526866 POLD1P28340 1107 aa25.88■■□□□ 1.73
CDC27-203ENST00000526866 KLHL34Q8N239 644 aa25.88■■□□□ 1.73
CDC27-203ENST00000526866 CCNL1Q9UK58 526 aaPredicted RBP25.88■■□□□ 1.73
CDC27-203ENST00000526866 CGNL1Q0VF96 1302 aa25.87■■□□□ 1.73
CDC27-203ENST00000526866 RAPGEF4Q8WZA2 1011 aa25.87■■□□□ 1.73
CDC27-203ENST00000526866 HSP90AB2PQ58FF8 381 aa25.86■■□□□ 1.73
CDC27-203ENST00000526866 INSRP06213 1382 aa25.85■■□□□ 1.73
CDC27-203ENST00000526866 TATP17735 454 aaPredicted RBP25.85■■□□□ 1.73
CDC27-203ENST00000526866 GPR162Q16538 588 aa25.85■■□□□ 1.73
CDC27-203ENST00000526866 FLT4P35916 1363 aa25.83■■□□□ 1.73
CDC27-203ENST00000526866 CDCA8Q53HL2 280 aa25.81■■□□□ 1.72
CDC27-203ENST00000526866 COL23A1Q86Y22 540 aaPredicted RBP25.8■■□□□ 1.72
CDC27-203ENST00000526866 PCDH11XQ9BZA7 1347 aa25.8■■□□□ 1.72
CDC27-203ENST00000526866 PCDH11YQ9BZA8 1340 aa25.8■■□□□ 1.72
CDC27-203ENST00000526866 KIF24Q5T7B8 1368 aa25.8■■□□□ 1.72
CDC27-203ENST00000526866 C5P01031 1676 aa25.8■■□□□ 1.72
CDC27-203ENST00000526866 MSH5O43196 834 aa25.8■■□□□ 1.72
CDC27-203ENST00000526866 NLGN2Q8NFZ4 835 aa25.8■■□□□ 1.72
CDC27-203ENST00000526866 CARD14Q9BXL6 1004 aa25.8■■□□□ 1.72
CDC27-203ENST00000526866 PELP1Q8IZL8 1130 aaKnown RBP25.79■■□□□ 1.72
CDC27-203ENST00000526866 EMILIN1Q9Y6C2 1016 aa25.78■■□□□ 1.72
CDC27-203ENST00000526866 NSD3Q9BZ95 1437 aa25.77■■□□□ 1.72
CDC27-203ENST00000526866 TAF1LQ8IZX4 1826 aa25.77■■□□□ 1.72
CDC27-203ENST00000526866 TOGARAM1Q9Y4F4 1720 aa25.77■■□□□ 1.72
CDC27-203ENST00000526866 CYP27B1O15528 508 aa25.76■■□□□ 1.71
CDC27-203ENST00000526866 ITGB4P16144 1822 aa25.75■■□□□ 1.71
CDC27-203ENST00000526866 PALLDQ8WX93 1383 aa25.75■■□□□ 1.71
CDC27-203ENST00000526866 TRIM26Q12899 539 aaPredicted RBP25.75■■□□□ 1.71
CDC27-203ENST00000526866 MPRIPQ6WCQ1 1025 aa25.75■■□□□ 1.71
CDC27-203ENST00000526866 PKD1L3Q7Z443 1732 aa25.75■■□□□ 1.71
CDC27-203ENST00000526866 GOLGB1Q14789 3259 aaKnown RBP25.74■■□□□ 1.71
CDC27-203ENST00000526866 MSL1Q68DK7 614 aa25.73■■□□□ 1.71
CDC27-203ENST00000526866 ANKRD26Q9UPS8 1709 aa25.72■■□□□ 1.71
CDC27-203ENST00000526866 NCAPD2Q15021 1401 aa25.71■■□□□ 1.71
CDC27-203ENST00000526866 PPM1GO15355 546 aaPredicted RBP25.7■■□□□ 1.7
CDC27-203ENST00000526866 YBX3P16989 372 aaKnown RBP eCLIP25.69■■□□□ 1.7
CDC27-203ENST00000526866 C1QTNF8P60827 252 aa25.69■■□□□ 1.7
CDC27-203ENST00000526866 C4BP0C0L5 1744 aa25.69■■□□□ 1.7
CDC27-203ENST00000526866 MAP2P11137 1827 aaKnown RBP25.69■■□□□ 1.7
CDC27-203ENST00000526866 FLAD1Q8NFF5 587 aa25.67■■□□□ 1.7
CDC27-203ENST00000526866 SMARCC1Q92922 1105 aaPredicted RBP25.67■■□□□ 1.7
CDC27-203ENST00000526866 WASHC2AQ641Q2 1341 aa25.67■■□□□ 1.7
CDC27-203ENST00000526866 HMGB2P26583 209 aaKnown RBP25.66■■□□□ 1.7
CDC27-203ENST00000526866 PIGBQ92521 554 aa25.66■■□□□ 1.7
CDC27-203ENST00000526866 NKX1-1Q15270 411 aaPredicted RBP25.65■■□□□ 1.7
CDC27-203ENST00000526866 UBR3Q6ZT12 1888 aa25.64■■□□□ 1.7
CDC27-203ENST00000526866 AMIGO3Q86WK7 504 aa25.64■■□□□ 1.7
CDC27-203ENST00000526866 EYA1Q99502 592 aa25.64■■□□□ 1.7
CDC27-203ENST00000526866 SPG7Q9UQ90 795 aa25.64■■□□□ 1.7
CDC27-203ENST00000526866 SENP3-EIF4A1A0A087X0R7 540 aa25.63■■□□□ 1.69
CDC27-203ENST00000526866 GRIN3BO60391 1043 aa25.63■■□□□ 1.69
CDC27-203ENST00000526866 AK7Q96M32 723 aa25.63■■□□□ 1.69
CDC27-203ENST00000526866 SMIM5Q71RC9 77 aa25.62■■□□□ 1.69
CDC27-203ENST00000526866 POLKQ9UBT6 870 aa25.62■■□□□ 1.69
CDC27-203ENST00000526866 CD2APQ9Y5K6 639 aa25.62■■□□□ 1.69
CDC27-203ENST00000526866 TIMELESSQ9UNS1 1208 aa25.61■■□□□ 1.69
CDC27-203ENST00000526866 GIGYF1O75420 1035 aaPredicted RBP25.6■■□□□ 1.69
CDC27-203ENST00000526866 PHF14O94880 888 aa25.6■■□□□ 1.69
CDC27-203ENST00000526866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.59■■□□□ 1.698e-7■■■■□ 20.4
CDC27-203ENST00000526866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.58■■□□□ 1.69
CDC27-203ENST00000526866 LOC102724428A0A0B4J2F2 783 aa25.58■■□□□ 1.69
CDC27-203ENST00000526866 SIK1P57059 783 aa25.58■■□□□ 1.69
CDC27-203ENST00000526866 LINC00116Q8NCU8 138 aa25.58■■□□□ 1.69
CDC27-203ENST00000526866 POLR3GLQ9BT43 218 aa25.58■■□□□ 1.69
CDC27-203ENST00000526866 TMOD3Q9NYL9 352 aa25.58■■□□□ 1.69
CDC27-203ENST00000526866 PHKG2P15735 406 aa25.57■■□□□ 1.68
CDC27-203ENST00000526866 IFNL2Q8IZJ0 200 aa25.56■■□□□ 1.68
CDC27-203ENST00000526866 ASAP1Q9ULH1 1129 aa25.56■■□□□ 1.68
CDC27-203ENST00000526866 TNNT2P45379 298 aaPredicted RBP25.55■■□□□ 1.68
CDC27-203ENST00000526866 EIF4A2Q14240 407 aaKnown RBP25.55■■□□□ 1.68
CDC27-203ENST00000526866 SSFA2P28290 1259 aa25.54■■□□□ 1.68
CDC27-203ENST00000526866 ITPK1Q13572 414 aa25.54■■□□□ 1.68
CDC27-203ENST00000526866 ATP6V1AP38606 617 aa25.52■■□□□ 1.68
CDC27-203ENST00000526866 ATG3Q9NT62 314 aa25.51■■□□□ 1.67
CDC27-203ENST00000526866 ATP10DQ9P241 1426 aa25.51■■□□□ 1.67
CDC27-203ENST00000526866 GNPATO15228 680 aa25.5■■□□□ 1.67
CDC27-203ENST00000526866 IGSF1Q8N6C5 1336 aa25.49■■□□□ 1.67
CDC27-203ENST00000526866 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
CDC27-203ENST00000526866 WWC3Q9ULE0 1092 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms