RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 SNX21Q969T3 373 aa25.47■■□□□ 1.67
SMIM3-201ENST00000526627 KIF2CQ99661 725 aa25.47■■□□□ 1.67
SMIM3-201ENST00000526627 HAP1P54257 671 aaPredicted RBP25.47■■□□□ 1.67
SMIM3-201ENST00000526627 TBC1D9Q6ZT07 1266 aa25.47■■□□□ 1.67
SMIM3-201ENST00000526627 HSCBQ8IWL3 235 aa25.46■■□□□ 1.67
SMIM3-201ENST00000526627 CHMP5Q9NZZ3 219 aa25.46■■□□□ 1.67
SMIM3-201ENST00000526627 SBNO1A3KN83 1393 aa25.46■■□□□ 1.67
SMIM3-201ENST00000526627 FOXO3O43524 673 aa25.46■■□□□ 1.67
SMIM3-201ENST00000526627 FLT4P35916 1363 aa25.45■■□□□ 1.66
SMIM3-201ENST00000526627 KDRP35968 1356 aa25.45■■□□□ 1.66
SMIM3-201ENST00000526627 MTHFSDQ2M296 383 aaKnown RBP25.45■■□□□ 1.66
SMIM3-201ENST00000526627 ANKRD44Q8N8A2 993 aa25.45■■□□□ 1.66
SMIM3-201ENST00000526627 PIK3C2AO00443 1686 aa25.44■■□□□ 1.66
SMIM3-201ENST00000526627 PTPRCP08575 1304 aa25.44■■□□□ 1.66
SMIM3-201ENST00000526627 DDIT3P35638 169 aa25.44■■□□□ 1.66
SMIM3-201ENST00000526627 GSPT1P15170 499 aaKnown RBP25.43■■□□□ 1.66
SMIM3-201ENST00000526627 PLEKHM2Q8IWE5 1019 aa25.43■■□□□ 1.66
SMIM3-201ENST00000526627 CEP170BQ9Y4F5 1589 aaPredicted RBP25.43■■□□□ 1.66
SMIM3-201ENST00000526627 MSH6P52701 1360 aa25.43■■□□□ 1.66
SMIM3-201ENST00000526627 MIS18AQ9NYP9 233 aa25.42■■□□□ 1.66
SMIM3-201ENST00000526627 IGSF1Q8N6C5 1336 aa25.41■■□□□ 1.66
SMIM3-201ENST00000526627 MCM4P33991 863 aa25.41■■□□□ 1.66
SMIM3-201ENST00000526627 CEP85Q6P2H3 762 aa25.41■■□□□ 1.66
SMIM3-201ENST00000526627 XRN1Q8IZH2 1706 aaKnown RBP25.41■■□□□ 1.66
SMIM3-201ENST00000526627 RTL1A6NKG5 1358 aa25.41■■□□□ 1.66
SMIM3-201ENST00000526627 NGDNQ8NEJ9 315 aaKnown RBP25.41■■□□□ 1.66
SMIM3-201ENST00000526627 EYA1Q99502 592 aa25.41■■□□□ 1.66
SMIM3-201ENST00000526627 RPAP2Q8IXW5 612 aaPredicted RBP25.4■■□□□ 1.66
SMIM3-201ENST00000526627 CDC45O75419 566 aa25.38■■□□□ 1.65
SMIM3-201ENST00000526627 C16orf71Q8IYS4 520 aaPredicted RBP25.38■■□□□ 1.65
SMIM3-201ENST00000526627 MEIS3Q99687 375 aa25.38■■□□□ 1.65
SMIM3-201ENST00000526627 SLC4A2P04920 1241 aa25.38■■□□□ 1.65
SMIM3-201ENST00000526627 MARF1Q9Y4F3 1742 aaKnown RBP25.38■■□□□ 1.65
SMIM3-201ENST00000526627 FER1L4A9Z1Z3 1794 aa25.36■■□□□ 1.65
SMIM3-201ENST00000526627 AMPHP49418 695 aa25.36■■□□□ 1.65
SMIM3-201ENST00000526627 TTC22Q5TAA0 569 aa25.36■■□□□ 1.65
SMIM3-201ENST00000526627 TSPYL4Q9UJ04 414 aa25.36■■□□□ 1.65
SMIM3-201ENST00000526627 PLPPR3Q6T4P5 718 aa25.36■■□□□ 1.65
SMIM3-201ENST00000526627 G2E3Q7L622 706 aa25.36■■□□□ 1.65
SMIM3-201ENST00000526627 CD2BP2O95400 341 aaKnown RBP25.35■■□□□ 1.65
SMIM3-201ENST00000526627 THEMISQ8N1K5 641 aaPredicted RBP25.35■■□□□ 1.65
SMIM3-201ENST00000526627 RTF1Q92541 710 aaKnown RBP25.35■■□□□ 1.65
SMIM3-201ENST00000526627 ANKARQ7Z5J8 1434 aa25.35■■□□□ 1.65
SMIM3-201ENST00000526627 LRRC37A3O60309 1634 aa25.34■■□□□ 1.65
SMIM3-201ENST00000526627 OTUD7AQ8TE49 926 aaPredicted RBP25.34■■□□□ 1.65
SMIM3-201ENST00000526627 GAS2L2Q8NHY3 880 aa25.34■■□□□ 1.65
SMIM3-201ENST00000526627 RTN4Q9NQC3 1192 aaKnown RBP25.34■■□□□ 1.65
SMIM3-201ENST00000526627 NWD1Q149M9 1564 aa25.34■■□□□ 1.65
SMIM3-201ENST00000526627 USP54Q70EL1 1684 aa25.32■■□□□ 1.64
SMIM3-201ENST00000526627 NLRP6P59044 892 aa25.31■■□□□ 1.64
SMIM3-201ENST00000526627 RBM42Q9BTD8 480 aaKnown RBP25.31■■□□□ 1.64
SMIM3-201ENST00000526627 KCNA6P17658 529 aa25.31■■□□□ 1.64
SMIM3-201ENST00000526627 F6X3S4 739 aa25.3■■□□□ 1.64
SMIM3-201ENST00000526627 HTATSF1O43719 755 aaKnown RBP25.3■■□□□ 1.64
SMIM3-201ENST00000526627 SMARCA5O60264 1052 aaPredicted RBP25.3■■□□□ 1.64
SMIM3-201ENST00000526627 HOXC9P31274 260 aa25.3■■□□□ 1.64
SMIM3-201ENST00000526627 HSP90AB1P08238 724 aaKnown RBP25.29■■□□□ 1.64
SMIM3-201ENST00000526627 CIZ1Q9ULV3 898 aaPredicted RBP25.28■■□□□ 1.64
SMIM3-201ENST00000526627 CCT4P50991 539 aaKnown RBP25.27■■□□□ 1.64
SMIM3-201ENST00000526627 NUTM2GQ5VZR2 741 aa25.27■■□□□ 1.64
SMIM3-201ENST00000526627 K7ELQ4 463 aaPredicted RBP25.26■■□□□ 1.63
SMIM3-201ENST00000526627 FAM208AQ9UK61 1670 aaKnown RBP25.26■■□□□ 1.63
SMIM3-201ENST00000526627 TRAK2O60296 914 aa25.25■■□□□ 1.63
SMIM3-201ENST00000526627 SLC4A10Q6U841 1118 aa25.25■■□□□ 1.63
SMIM3-201ENST00000526627 GNAT3A8MTJ3 354 aa25.25■■□□□ 1.63
SMIM3-201ENST00000526627 SDSP20132 328 aa25.25■■□□□ 1.63
SMIM3-201ENST00000526627 APBB1O00213 710 aa25.24■■□□□ 1.63
SMIM3-201ENST00000526627 TNPO1Q92973 898 aaKnown RBP25.24■■□□□ 1.63
SMIM3-201ENST00000526627 RAB3GAP1Q15042 981 aa25.24■■□□□ 1.63
SMIM3-201ENST00000526627 USP26Q9BXU7 913 aa25.24■■□□□ 1.63
SMIM3-201ENST00000526627 IL17REQ8NFR9 667 aa25.23■■□□□ 1.63
SMIM3-201ENST00000526627 FSD2A1L4K1 749 aa25.23■■□□□ 1.63
SMIM3-201ENST00000526627 DDX11L8A8MPP1 907 aa25.22■■□□□ 1.63
SMIM3-201ENST00000526627 EIF5BO60841 1220 aaKnown RBP25.22■■□□□ 1.63
SMIM3-201ENST00000526627 HMMRO75330 724 aa25.21■■□□□ 1.63
SMIM3-201ENST00000526627 L1TD1Q5T7N2 865 aaKnown RBP25.21■■□□□ 1.63
SMIM3-201ENST00000526627 MAP3K5Q99683 1374 aa25.21■■□□□ 1.63
SMIM3-201ENST00000526627 ABTB2Q8N961 1025 aa25.21■■□□□ 1.63
SMIM3-201ENST00000526627 STK31Q9BXU1 1019 aa25.21■■□□□ 1.63
SMIM3-201ENST00000526627 FLIIQ13045 1269 aa25.2■■□□□ 1.63
SMIM3-201ENST00000526627 CCDC30Q5VVM6 783 aa25.19■■□□□ 1.62
SMIM3-201ENST00000526627 GZF1Q9H116 711 aaPredicted RBP25.19■■□□□ 1.62
SMIM3-201ENST00000526627 FOXD4L1Q9NU39 408 aa25.19■■□□□ 1.62
SMIM3-201ENST00000526627 GNAI2P04899 355 aa25.19■■□□□ 1.62
SMIM3-201ENST00000526627 OSBPL3Q9H4L5 887 aa25.19■■□□□ 1.62
SMIM3-201ENST00000526627 RABEP1Q15276 862 aa25.18■■□□□ 1.62
SMIM3-201ENST00000526627 LTV1Q96GA3 475 aaPredicted RBP25.18■■□□□ 1.62
SMIM3-201ENST00000526627 CACNA1FO60840 1977 aa25.17■■□□□ 1.62
SMIM3-201ENST00000526627 SOS1Q07889 1333 aaPredicted RBP25.16■■□□□ 1.62
SMIM3-201ENST00000526627 TAF7Q15545 349 aaPredicted RBP25.16■■□□□ 1.62
SMIM3-201ENST00000526627 NECTIN2Q92692 538 aa25.16■■□□□ 1.62
SMIM3-201ENST00000526627 BABAM1Q9NWV8 329 aa25.16■■□□□ 1.62
SMIM3-201ENST00000526627 N4BP2Q86UW6 1770 aaPredicted RBP25.16■■□□□ 1.62
SMIM3-201ENST00000526627 SALL3Q9BXA9 1300 aa25.16■■□□□ 1.62
SMIM3-201ENST00000526627 PDE1AP54750 535 aa25.15■■□□□ 1.62
SMIM3-201ENST00000526627 FKBP5Q13451 457 aaPredicted RBP25.15■■□□□ 1.62
SMIM3-201ENST00000526627 HSP90AA1P07900 732 aaKnown RBP25.15■■□□□ 1.62
SMIM3-201ENST00000526627 LTN1O94822 1766 aa25.15■■□□□ 1.62
SMIM3-201ENST00000526627 GOLGA6L3A6NEY3 463 aa25.14■■□□□ 1.62
SMIM3-201ENST00000526627 XRCC6P12956 609 aaKnown RBP eCLIP25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms