RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 LTV1Q96GA3 475 aaPredicted RBP28■■■□□ 2.07
AMBRA1-205ENST00000526606 SLC12A5Q9H2X9 1139 aa28■■■□□ 2.07
AMBRA1-205ENST00000526606 CCNL1Q9UK58 526 aaPredicted RBP28■■■□□ 2.07
AMBRA1-205ENST00000526606 DOT1LQ8TEK3 1739 aa28■■■□□ 2.07
AMBRA1-205ENST00000526606 MSL1Q68DK7 614 aa27.99■■■□□ 2.07
AMBRA1-205ENST00000526606 MSH5O43196 834 aa27.97■■■□□ 2.07
AMBRA1-205ENST00000526606 HSPA6P17066 643 aa27.97■■■□□ 2.07
AMBRA1-205ENST00000526606 SIN3AQ96ST3 1273 aa27.97■■■□□ 2.07
AMBRA1-205ENST00000526606 ADCY9O60503 1353 aa27.97■■■□□ 2.07
AMBRA1-205ENST00000526606 GPBP1L1Q9HC44 474 aaPredicted RBP27.96■■■□□ 2.07
AMBRA1-205ENST00000526606 EDC4Q6P2E9 1401 aaKnown RBP27.95■■■□□ 2.07
AMBRA1-205ENST00000526606 ZCRB1Q8TBF4 217 aaKnown RBP27.95■■■□□ 2.06
AMBRA1-205ENST00000526606 TMC1Q8TDI8 760 aa27.95■■■□□ 2.06
AMBRA1-205ENST00000526606 CD2APQ9Y5K6 639 aa27.95■■■□□ 2.06
AMBRA1-205ENST00000526606 FAM208AQ9UK61 1670 aaKnown RBP27.94■■■□□ 2.06
AMBRA1-205ENST00000526606 FBLN1P23142 703 aa27.93■■■□□ 2.06
AMBRA1-205ENST00000526606 HDGFL2Q7Z4V5 671 aaPredicted RBP27.93■■■□□ 2.06
AMBRA1-205ENST00000526606 RGPD2P0DJD1 1756 aa27.92■■■□□ 2.06
AMBRA1-205ENST00000526606 MEGF6O75095 1541 aa27.92■■■□□ 2.06
AMBRA1-205ENST00000526606 ZNF526Q8TF50 670 aaPredicted RBP27.91■■■□□ 2.06
AMBRA1-205ENST00000526606 A0A1W2PP64 1363 aa27.9■■■□□ 2.06
AMBRA1-205ENST00000526606 HOXC9P31274 260 aa27.89■■■□□ 2.06
AMBRA1-205ENST00000526606 MAP3K19Q56UN5 1328 aa27.89■■■□□ 2.05
AMBRA1-205ENST00000526606 USP47Q96K76 1375 aa27.88■■■□□ 2.05
AMBRA1-205ENST00000526606 AMIGO3Q86WK7 504 aa27.86■■■□□ 2.05
AMBRA1-205ENST00000526606 TERF2IPQ9NYB0 399 aa27.85■■■□□ 2.05
AMBRA1-205ENST00000526606 C5P01031 1676 aa27.84■■■□□ 2.05
AMBRA1-205ENST00000526606 NBPF6Q5VWK0 638 aa27.84■■■□□ 2.05
AMBRA1-205ENST00000526606 NBPF4Q96M43 638 aa27.84■■■□□ 2.05
AMBRA1-205ENST00000526606 KIF3CO14782 793 aa27.83■■■□□ 2.05
AMBRA1-205ENST00000526606 NEUROD1Q13562 356 aa27.82■■■□□ 2.04
AMBRA1-205ENST00000526606 TAF1LQ8IZX4 1826 aa27.82■■■□□ 2.04
AMBRA1-205ENST00000526606 SMIM5Q71RC9 77 aa27.81■■■□□ 2.04
AMBRA1-205ENST00000526606 FLAD1Q8NFF5 587 aa27.81■■■□□ 2.04
AMBRA1-205ENST00000526606 WWC3Q9ULE0 1092 aa27.81■■■□□ 2.04
AMBRA1-205ENST00000526606 AMPHP49418 695 aa27.8■■■□□ 2.04
AMBRA1-205ENST00000526606 USHBP1Q8N6Y0 703 aa27.8■■■□□ 2.04
AMBRA1-205ENST00000526606 IGSF1Q8N6C5 1336 aa27.79■■■□□ 2.04
AMBRA1-205ENST00000526606 COG3Q96JB2 828 aa27.78■■■□□ 2.04
AMBRA1-205ENST00000526606 PUS7Q96PZ0 661 aaKnown RBP27.78■■■□□ 2.04
AMBRA1-205ENST00000526606 CARD11Q9BXL7 1154 aa27.77■■■□□ 2.04
AMBRA1-205ENST00000526606 TOGARAM1Q9Y4F4 1720 aa27.77■■■□□ 2.04
AMBRA1-205ENST00000526606 PALLDQ8WX93 1383 aa27.76■■■□□ 2.03
AMBRA1-205ENST00000526606 CGNL1Q0VF96 1302 aa27.75■■■□□ 2.03
AMBRA1-205ENST00000526606 DNAJC5GQ8N7S2 189 aa27.75■■■□□ 2.03
AMBRA1-205ENST00000526606 C4BP0C0L5 1744 aa27.73■■■□□ 2.03
AMBRA1-205ENST00000526606 RRS1Q15050 365 aaKnown RBP27.73■■■□□ 2.03
AMBRA1-205ENST00000526606 MPRIPQ6WCQ1 1025 aa27.73■■■□□ 2.03
AMBRA1-205ENST00000526606 UBR3Q6ZT12 1888 aa27.72■■■□□ 2.03
AMBRA1-205ENST00000526606 CYP27B1O15528 508 aa27.71■■■□□ 2.03
AMBRA1-205ENST00000526606 RAPGEF4Q8WZA2 1011 aa27.71■■■□□ 2.03
AMBRA1-205ENST00000526606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.69■■■□□ 2.02
AMBRA1-205ENST00000526606 PHF14O94880 888 aa27.69■■■□□ 2.02
AMBRA1-205ENST00000526606 AK7Q96M32 723 aa27.69■■■□□ 2.02
AMBRA1-205ENST00000526606 RTL1A6NKG5 1358 aa27.69■■■□□ 2.02
AMBRA1-205ENST00000526606 TATP17735 454 aaPredicted RBP27.68■■■□□ 2.02
AMBRA1-205ENST00000526606 ITGB4P16144 1822 aa27.67■■■□□ 2.02
AMBRA1-205ENST00000526606 HMGB2P26583 209 aaKnown RBP27.67■■■□□ 2.02
AMBRA1-205ENST00000526606 APLP1P51693 650 aa27.67■■■□□ 2.02
AMBRA1-205ENST00000526606 TESK2Q96S53 571 aa27.67■■■□□ 2.02
AMBRA1-205ENST00000526606 PCDH11XQ9BZA7 1347 aa27.67■■■□□ 2.02
AMBRA1-205ENST00000526606 PCDH11YQ9BZA8 1340 aa27.67■■■□□ 2.02
AMBRA1-205ENST00000526606 PCNTO95613 3336 aa27.65■■■□□ 2.02
AMBRA1-205ENST00000526606 HSP90AB2PQ58FF8 381 aa27.65■■■□□ 2.02
AMBRA1-205ENST00000526606 PIGBQ92521 554 aa27.65■■■□□ 2.02
AMBRA1-205ENST00000526606 CICQ96RK0 1608 aaPredicted RBP27.65■■■□□ 2.02
AMBRA1-205ENST00000526606 MAP2P11137 1827 aaKnown RBP27.64■■■□□ 2.02
AMBRA1-205ENST00000526606 FYB1O15117 783 aa27.64■■■□□ 2.02
AMBRA1-205ENST00000526606 LINC00116Q8NCU8 138 aa27.64■■■□□ 2.02
AMBRA1-205ENST00000526606 SMARCC1Q92922 1105 aaPredicted RBP27.64■■■□□ 2.02
AMBRA1-205ENST00000526606 TOMM70O94826 608 aa27.62■■■□□ 2.01
AMBRA1-205ENST00000526606 SSFA2P28290 1259 aa27.62■■■□□ 2.01
AMBRA1-205ENST00000526606 GGNBP2Q9H3C7 697 aa27.62■■■□□ 2.01
AMBRA1-205ENST00000526606 KIAA1551Q9HCM1 1747 aa27.6■■■□□ 2.01
AMBRA1-205ENST00000526606 INSRP06213 1382 aa27.6■■■□□ 2.01
AMBRA1-205ENST00000526606 NKX1-1Q15270 411 aaPredicted RBP27.59■■■□□ 2.01
AMBRA1-205ENST00000526606 PXDNLA1KZ92 1463 aa27.58■■■□□ 2.01
AMBRA1-205ENST00000526606 LOC102724428A0A0B4J2F2 783 aa27.58■■■□□ 2.01
AMBRA1-205ENST00000526606 SIK1P57059 783 aa27.58■■■□□ 2.01
AMBRA1-205ENST00000526606 ITPK1Q13572 414 aa27.58■■■□□ 2.01
AMBRA1-205ENST00000526606 SMG6Q86US8 1419 aaKnown RBP27.58■■■□□ 2
AMBRA1-205ENST00000526606 NMRK2Q9NPI5 230 aa27.57■■■□□ 2
AMBRA1-205ENST00000526606 NSD3Q9BZ95 1437 aa27.57■■■□□ 2
AMBRA1-205ENST00000526606 KIF13BQ9NQT8 1826 aa27.56■■■□□ 2
AMBRA1-205ENST00000526606 ST20-MTHFSA0A0A6YYL1 179 aa27.56■■■□□ 2
AMBRA1-205ENST00000526606 MMP10P09238 476 aa27.55■■■□□ 2
AMBRA1-205ENST00000526606 N4BP2Q86UW6 1770 aaPredicted RBP27.55■■■□□ 2
AMBRA1-205ENST00000526606 A0A0G2JLW4 131 aa27.54■■■□□ 2
AMBRA1-205ENST00000526606 PKD1L3Q7Z443 1732 aa27.54■■■□□ 2
AMBRA1-205ENST00000526606 ASAP1Q9ULH1 1129 aa27.54■■■□□ 2
AMBRA1-205ENST00000526606 GNPATO15228 680 aa27.52■■■□□ 2
AMBRA1-205ENST00000526606 BCS1LQ9Y276 419 aa27.52■■■□□ 2
AMBRA1-205ENST00000526606 FLT4P35916 1363 aa27.51■■□□□ 1.99
AMBRA1-205ENST00000526606 TGFB2P61812 414 aa27.51■■□□□ 1.99
AMBRA1-205ENST00000526606 HTRA3P83110 453 aa27.51■■□□□ 1.99
AMBRA1-205ENST00000526606 COL13A1Q5TAT6 717 aaPredicted RBP27.51■■□□□ 1.99
AMBRA1-205ENST00000526606 NCAPD2Q15021 1401 aa27.5■■□□□ 1.99
AMBRA1-205ENST00000526606 ARHGAP27Q6ZUM4 889 aa27.49■■□□□ 1.99
AMBRA1-205ENST00000526606 WDR90Q96KV7 1748 aa27.49■■□□□ 1.99
AMBRA1-205ENST00000526606 ATP6V1AP38606 617 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms