RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 NLRP2Q9NX02 1062 aa25.79■■□□□ 1.72
PPP1CA-204ENST00000526510 GNAI1P63096 354 aa25.78■■□□□ 1.72
PPP1CA-204ENST00000526510 MAP3K5Q99683 1374 aa25.78■■□□□ 1.72
PPP1CA-204ENST00000526510 COL14A1Q05707 1796 aaKnown RBP25.77■■□□□ 1.72
PPP1CA-204ENST00000526510 BCAR3O75815 825 aa25.77■■□□□ 1.72
PPP1CA-204ENST00000526510 CFAP44Q96MT7 982 aa25.77■■□□□ 1.72
PPP1CA-204ENST00000526510 MBIPQ9NS73 344 aa25.77■■□□□ 1.72
PPP1CA-204ENST00000526510 GNAT3A8MTJ3 354 aa25.76■■□□□ 1.71
PPP1CA-204ENST00000526510 HTATSF1O43719 755 aaKnown RBP25.76■■□□□ 1.71
PPP1CA-204ENST00000526510 CSB-PGBD3P0DP91 1061 aa25.76■■□□□ 1.71
PPP1CA-204ENST00000526510 RARSP54136 660 aaKnown RBP25.74■■□□□ 1.71
PPP1CA-204ENST00000526510 ERICH6BQ5W0A0 696 aa25.74■■□□□ 1.71
PPP1CA-204ENST00000526510 RTF1Q92541 710 aaKnown RBP25.74■■□□□ 1.71
PPP1CA-204ENST00000526510 MEGF6O75095 1541 aa25.74■■□□□ 1.71
PPP1CA-204ENST00000526510 PKD1L3Q7Z443 1732 aa25.74■■□□□ 1.71
PPP1CA-204ENST00000526510 WDR17Q8IZU2 1322 aa25.74■■□□□ 1.71
PPP1CA-204ENST00000526510 PLEKHO1Q53GL0 409 aaPredicted RBP25.73■■□□□ 1.71
PPP1CA-204ENST00000526510 CT47B1P0C2W7 299 aaPredicted RBP25.72■■□□□ 1.71
PPP1CA-204ENST00000526510 IL17REQ8NFR9 667 aa25.72■■□□□ 1.71
PPP1CA-204ENST00000526510 CERKQ8TCT0 537 aa25.72■■□□□ 1.71
PPP1CA-204ENST00000526510 CHL1O00533 1208 aa25.71■■□□□ 1.71
PPP1CA-204ENST00000526510 AMOTQ4VCS5 1084 aa25.71■■□□□ 1.71
PPP1CA-204ENST00000526510 PARP4Q9UKK3 1724 aaKnown RBP25.71■■□□□ 1.71
PPP1CA-204ENST00000526510 PLCH1Q4KWH8 1693 aa25.7■■□□□ 1.71
PPP1CA-204ENST00000526510 ADAMTS7Q9UKP4 1686 aa25.7■■□□□ 1.71
PPP1CA-204ENST00000526510 ZNF530Q6P9A1 599 aaPredicted RBP25.7■■□□□ 1.7
PPP1CA-204ENST00000526510 C20orf194Q5TEA3 1177 aa25.69■■□□□ 1.7
PPP1CA-204ENST00000526510 CEMIPQ8WUJ3 1361 aa25.68■■□□□ 1.7
PPP1CA-204ENST00000526510 SIPA1L3O60292 1781 aaPredicted RBP25.68■■□□□ 1.7
PPP1CA-204ENST00000526510 AKAP4Q5JQC9 854 aa25.68■■□□□ 1.7
PPP1CA-204ENST00000526510 RAPGEF4Q8WZA2 1011 aa25.68■■□□□ 1.7
PPP1CA-204ENST00000526510 SCN11AQ9UI33 1791 aa25.67■■□□□ 1.7
PPP1CA-204ENST00000526510 TSPYL6Q8N831 410 aa25.67■■□□□ 1.7
PPP1CA-204ENST00000526510 TATP17735 454 aaPredicted RBP25.66■■□□□ 1.7
PPP1CA-204ENST00000526510 LARP1Q6PKG0 1096 aaKnown RBP25.66■■□□□ 1.7
PPP1CA-204ENST00000526510 TOM1L2Q6ZVM7 507 aa25.66■■□□□ 1.7
PPP1CA-204ENST00000526510 BCL2L13Q9BXK5 485 aa25.66■■□□□ 1.7
PPP1CA-204ENST00000526510 KDM3BQ7LBC6 1761 aa25.65■■□□□ 1.7
PPP1CA-204ENST00000526510 C8orf58Q8NAV2 365 aa25.65■■□□□ 1.7
PPP1CA-204ENST00000526510 LGR6Q9HBX8 967 aa25.65■■□□□ 1.7
PPP1CA-204ENST00000526510 MIS18AQ9NYP9 233 aa25.65■■□□□ 1.7
PPP1CA-204ENST00000526510 PLEKHG2Q9H7P9 1386 aa25.65■■□□□ 1.7
PPP1CA-204ENST00000526510 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.64■■□□□ 1.7
PPP1CA-204ENST00000526510 STRN4Q9NRL3 753 aa25.64■■□□□ 1.7
PPP1CA-204ENST00000526510 BTG4Q9NY30 223 aa25.64■■□□□ 1.7
PPP1CA-204ENST00000526510 NRAPQ86VF7 1730 aa25.64■■□□□ 1.7
PPP1CA-204ENST00000526510 SHANK3Q9BYB0 1731 aa25.64■■□□□ 1.7
PPP1CA-204ENST00000526510 VAMP4O75379 141 aa25.64■■□□□ 1.69
PPP1CA-204ENST00000526510 EXOC6Q8TAG9 804 aa25.64■■□□□ 1.69
PPP1CA-204ENST00000526510 SSH1Q8WYL5 1049 aa25.63■■□□□ 1.69
PPP1CA-204ENST00000526510 CARD10Q9BWT7 1032 aa25.63■■□□□ 1.69
PPP1CA-204ENST00000526510 PPP4R2Q9NY27 417 aa25.63■■□□□ 1.69
PPP1CA-204ENST00000526510 OVOS2A0A0G2JMS6 1433 aa25.63■■□□□ 1.69
PPP1CA-204ENST00000526510 EVA1CP58658 441 aa25.62■■□□□ 1.69
PPP1CA-204ENST00000526510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.62■■□□□ 1.69
PPP1CA-204ENST00000526510 C1orf141Q5JVX7 400 aa25.61■■□□□ 1.69
PPP1CA-204ENST00000526510 MPRIPQ6WCQ1 1025 aa25.61■■□□□ 1.69
PPP1CA-204ENST00000526510 ELL2O00472 640 aaPredicted RBP25.61■■□□□ 1.69
PPP1CA-204ENST00000526510 KRT24Q2M2I5 525 aa25.61■■□□□ 1.69
PPP1CA-204ENST00000526510 TWISTNBQ3B726 338 aaPredicted RBP25.61■■□□□ 1.69
PPP1CA-204ENST00000526510 CRBNQ96SW2 442 aa25.61■■□□□ 1.69
PPP1CA-204ENST00000526510 TSPYL4Q9UJ04 414 aa25.61■■□□□ 1.69
PPP1CA-204ENST00000526510 WNK3Q9BYP7 1800 aa25.6■■□□□ 1.69
PPP1CA-204ENST00000526510 RNMTO43148 476 aaKnown RBP25.59■■□□□ 1.69
PPP1CA-204ENST00000526510 TAF7Q15545 349 aaPredicted RBP25.59■■□□□ 1.69
PPP1CA-204ENST00000526510 SPG7Q9UQ90 795 aa25.59■■□□□ 1.69
PPP1CA-204ENST00000526510 ADAMTS2O95450 1211 aa25.58■■□□□ 1.69
PPP1CA-204ENST00000526510 FRAT1Q92837 279 aaPredicted RBP25.58■■□□□ 1.69
PPP1CA-204ENST00000526510 SMC4Q9NTJ3 1288 aa25.58■■□□□ 1.69
PPP1CA-204ENST00000526510 NWD2Q9ULI1 1742 aa25.58■■□□□ 1.69
PPP1CA-204ENST00000526510 ALDH1L2Q3SY69 923 aa25.58■■□□□ 1.68
PPP1CA-204ENST00000526510 ZNF428Q96B54 188 aa25.58■■□□□ 1.68
PPP1CA-204ENST00000526510 PHKG2P15735 406 aa25.57■■□□□ 1.68
PPP1CA-204ENST00000526510 KDM6AO15550 1401 aaPredicted RBP25.57■■□□□ 1.68
PPP1CA-204ENST00000526510 NUTM2BA6NNL0 878 aaPredicted RBP25.56■■□□□ 1.68
PPP1CA-204ENST00000526510 NUTM2EB1AL46 878 aaPredicted RBP25.56■■□□□ 1.68
PPP1CA-204ENST00000526510 NUTM2AQ8IVF1 878 aaPredicted RBP25.56■■□□□ 1.68
PPP1CA-204ENST00000526510 BABAM1Q9NWV8 329 aa25.56■■□□□ 1.68
PPP1CA-204ENST00000526510 TNNQ9UQP3 1299 aa25.56■■□□□ 1.68
PPP1CA-204ENST00000526510 CYP27B1O15528 508 aa25.55■■□□□ 1.68
PPP1CA-204ENST00000526510 JCADQ9P266 1359 aa25.54■■□□□ 1.68
PPP1CA-204ENST00000526510 CANXP27824 592 aaKnown RBP25.54■■□□□ 1.68
PPP1CA-204ENST00000526510 PDE3AQ14432 1141 aa25.54■■□□□ 1.68
PPP1CA-204ENST00000526510 IL2RBP14784 551 aa25.53■■□□□ 1.68
PPP1CA-204ENST00000526510 IFNL2Q8IZJ0 200 aa25.53■■□□□ 1.68
PPP1CA-204ENST00000526510 BRPF1P55201 1214 aaPredicted RBP25.52■■□□□ 1.68
PPP1CA-204ENST00000526510 MRPL50Q8N5N7 158 aaKnown RBP25.52■■□□□ 1.68
PPP1CA-204ENST00000526510 TEFQ10587 303 aa25.52■■□□□ 1.68
PPP1CA-204ENST00000526510 B4GALNT3Q6L9W6 998 aa25.52■■□□□ 1.68
PPP1CA-204ENST00000526510 PANK1Q8TE04 598 aa25.52■■□□□ 1.68
PPP1CA-204ENST00000526510 RLBP1P12271 317 aa25.51■■□□□ 1.67
PPP1CA-204ENST00000526510 USP35Q9P2H5 1018 aa25.51■■□□□ 1.67
PPP1CA-204ENST00000526510 SLIT2O94813 1529 aa25.5■■□□□ 1.67
PPP1CA-204ENST00000526510 TCERG1O14776 1098 aaKnown RBP25.5■■□□□ 1.67
PPP1CA-204ENST00000526510 ZCRB1Q8TBF4 217 aaKnown RBP25.5■■□□□ 1.67
PPP1CA-204ENST00000526510 NOB1Q9ULX3 412 aaKnown RBP25.5■■□□□ 1.67
PPP1CA-204ENST00000526510 DISP2A7MBM2 1401 aa25.5■■□□□ 1.67
PPP1CA-204ENST00000526510 MRC1P22897 1456 aa25.5■■□□□ 1.67
PPP1CA-204ENST00000526510 CACNA1FO60840 1977 aa25.49■■□□□ 1.67
PPP1CA-204ENST00000526510 ZKSCAN2Q63HK3 967 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms