RNA–Protein interactions for RNA: ENST00000526504.5

ME3-205, Transcript of malic enzyme 3, humanhuman

TSL 2

Gene ME3, Length 1,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-205ENST00000526504 FAM208AQ9UK61 1670 aaKnown RBP29.06■■■□□ 2.24
ME3-205ENST00000526504 IGSF1Q8N6C5 1336 aa29.05■■■□□ 2.24
ME3-205ENST00000526504 RBM19Q9Y4C8 960 aaKnown RBP29.05■■■□□ 2.24
ME3-205ENST00000526504 CRB1P82279 1406 aa29.04■■■□□ 2.24
ME3-205ENST00000526504 CRBNQ96SW2 442 aa29.03■■■□□ 2.24
ME3-205ENST00000526504 RGPD1P0DJD0 1748 aa29.03■■■□□ 2.24
ME3-205ENST00000526504 NEUROD2Q15784 382 aa29.03■■■□□ 2.24
ME3-205ENST00000526504 USHBP1Q8N6Y0 703 aa29.02■■■□□ 2.24
ME3-205ENST00000526504 CARD10Q9BWT7 1032 aa29.02■■■□□ 2.24
ME3-205ENST00000526504 SULT6B1Q6IMI4 303 aa29.01■■■□□ 2.23
ME3-205ENST00000526504 RGPD2P0DJD1 1756 aa29.01■■■□□ 2.23
ME3-205ENST00000526504 FCHSD2O94868 740 aa29.01■■■□□ 2.23
ME3-205ENST00000526504 TNKS1BP1Q9C0C2 1729 aaKnown RBP29■■■□□ 2.23
ME3-205ENST00000526504 HMOX1P09601 288 aa29■■■□□ 2.23
ME3-205ENST00000526504 VPS72Q15906 364 aa29■■■□□ 2.23
ME3-205ENST00000526504 TMPOP42166 694 aaKnown RBP28.99■■■□□ 2.23
ME3-205ENST00000526504 CCDC9Q9Y3X0 531 aaKnown RBP28.99■■■□□ 2.23
ME3-205ENST00000526504 MAPK8IP3Q9UPT6 1336 aa28.99■■■□□ 2.23
ME3-205ENST00000526504 AEBP1Q8IUX7 1158 aa28.98■■■□□ 2.23
ME3-205ENST00000526504 USP35Q9P2H5 1018 aa28.98■■■□□ 2.23
ME3-205ENST00000526504 NCAPD2Q15021 1401 aa28.98■■■□□ 2.23
ME3-205ENST00000526504 C20orf194Q5TEA3 1177 aa28.98■■■□□ 2.23
ME3-205ENST00000526504 MYH16Q9H6N6 1097 aa28.98■■■□□ 2.23
ME3-205ENST00000526504 KDRP35968 1356 aa28.97■■■□□ 2.23
ME3-205ENST00000526504 SPATA31A5Q5VU36 1347 aa28.97■■■□□ 2.23
ME3-205ENST00000526504 SPATA31A7Q8IWB4 1347 aa28.97■■■□□ 2.23
ME3-205ENST00000526504 SPATA31A1Q5TZJ5 1347 aa28.96■■■□□ 2.23
ME3-205ENST00000526504 ZNF772Q68DY9 489 aaPredicted RBP28.96■■■□□ 2.23
ME3-205ENST00000526504 TRPC5Q9UL62 973 aaPredicted RBP28.96■■■□□ 2.23
ME3-205ENST00000526504 IL16Q14005 1332 aa28.95■■■□□ 2.22
ME3-205ENST00000526504 RSPH6AQ9H0K4 717 aa28.94■■■□□ 2.22
ME3-205ENST00000526504 ATRNO75882 1429 aa28.93■■■□□ 2.22
ME3-205ENST00000526504 QTRT2Q9H974 415 aaKnown RBP28.93■■■□□ 2.22
ME3-205ENST00000526504 TRIM35Q9UPQ4 493 aa28.93■■■□□ 2.22
ME3-205ENST00000526504 BCAR3O75815 825 aa28.92■■■□□ 2.22
ME3-205ENST00000526504 THRAP3Q9Y2W1 955 aaKnown RBP28.92■■■□□ 2.22
ME3-205ENST00000526504 CT47B1P0C2W7 299 aaPredicted RBP28.91■■■□□ 2.22
ME3-205ENST00000526504 PRKAR2BP31323 418 aa28.91■■■□□ 2.22
ME3-205ENST00000526504 RAPGEF4Q8WZA2 1011 aa28.91■■■□□ 2.22
ME3-205ENST00000526504 PDE3AQ14432 1141 aa28.9■■■□□ 2.22
ME3-205ENST00000526504 GJD4Q96KN9 370 aaPredicted RBP28.9■■■□□ 2.22
ME3-205ENST00000526504 IL2RBP14784 551 aa28.88■■■□□ 2.21
ME3-205ENST00000526504 RARSP54136 660 aaKnown RBP28.88■■■□□ 2.21
ME3-205ENST00000526504 TATP17735 454 aaPredicted RBP28.87■■■□□ 2.21
ME3-205ENST00000526504 NEFMP07197 916 aa28.86■■■□□ 2.21
ME3-205ENST00000526504 RIPK4P57078 832 aa28.86■■■□□ 2.21
ME3-205ENST00000526504 BARGINQ6ZT62 677 aa28.86■■■□□ 2.21
ME3-205ENST00000526504 MEGF6O75095 1541 aa28.86■■■□□ 2.21
ME3-205ENST00000526504 RGS17Q9UGC6 210 aaPredicted RBP28.85■■■□□ 2.21
ME3-205ENST00000526504 CDCA7Q9BWT1 371 aaPredicted RBP28.84■■■□□ 2.21
ME3-205ENST00000526504 PHACTR3Q96KR7 559 aa28.83■■■□□ 2.21
ME3-205ENST00000526504 FAM98CQ17RN3 349 aaKnown RBP28.83■■■□□ 2.21
ME3-205ENST00000526504 DISP2A7MBM2 1401 aa28.83■■■□□ 2.2
ME3-205ENST00000526504 GLI3P10071 1580 aa28.82■■■□□ 2.2
ME3-205ENST00000526504 FANCIQ9NVI1 1328 aa28.82■■■□□ 2.2
ME3-205ENST00000526504 PLEKHG2Q9H7P9 1386 aa28.82■■■□□ 2.2
ME3-205ENST00000526504 OVOS2A0A0G2JMS6 1433 aa28.82■■■□□ 2.2
ME3-205ENST00000526504 PARP4Q9UKK3 1724 aaKnown RBP28.8■■■□□ 2.2
ME3-205ENST00000526504 KDM2BQ8NHM5 1336 aa28.8■■■□□ 2.2
ME3-205ENST00000526504 NFE2L2Q16236 605 aa28.8■■■□□ 2.2
ME3-205ENST00000526504 AMOTQ4VCS5 1084 aa28.8■■■□□ 2.2
ME3-205ENST00000526504 PLEKHO1Q53GL0 409 aaPredicted RBP28.8■■■□□ 2.2
ME3-205ENST00000526504 RBM6P78332 1123 aaKnown RBP28.79■■■□□ 2.2
ME3-205ENST00000526504 WNK3Q9BYP7 1800 aa28.79■■■□□ 2.2
ME3-205ENST00000526504 TCERG1O14776 1098 aaKnown RBP28.78■■■□□ 2.2
ME3-205ENST00000526504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.78■■■□□ 2.2
ME3-205ENST00000526504 SPG7Q9UQ90 795 aa28.78■■■□□ 2.2
ME3-205ENST00000526504 CENPQQ7L2Z9 268 aaPredicted RBP28.77■■■□□ 2.2
ME3-205ENST00000526504 A0A0G2JS52 829 aa28.76■■■□□ 2.19
ME3-205ENST00000526504 MYT1Q01538 1121 aa28.76■■■□□ 2.19
ME3-205ENST00000526504 ZCRB1Q8TBF4 217 aaKnown RBP28.76■■■□□ 2.19
ME3-205ENST00000526504 ONECUT3O60422 494 aaPredicted RBP28.75■■■□□ 2.19
ME3-205ENST00000526504 AAMPQ13685 434 aa28.75■■■□□ 2.19
ME3-205ENST00000526504 MTHFSDQ2M296 383 aaKnown RBP28.75■■■□□ 2.19
ME3-205ENST00000526504 POTEAQ6S8J7 498 aa28.75■■■□□ 2.19
ME3-205ENST00000526504 GAS2L2Q8NHY3 880 aa28.75■■■□□ 2.19
ME3-205ENST00000526504 DLG5Q8TDM6 1919 aa28.75■■■□□ 2.19
ME3-205ENST00000526504 EXOC5O00471 708 aa28.74■■■□□ 2.19
ME3-205ENST00000526504 CANXP27824 592 aaKnown RBP28.74■■■□□ 2.19
ME3-205ENST00000526504 RXRBP28702 533 aa28.74■■■□□ 2.19
ME3-205ENST00000526504 CALD1Q05682 793 aaKnown RBP28.73■■■□□ 2.19
ME3-205ENST00000526504 DDB1Q16531 1140 aa28.73■■■□□ 2.19
ME3-205ENST00000526504 TSR2Q969E8 191 aaKnown RBP28.73■■■□□ 2.19
ME3-205ENST00000526504 MS4A1P11836 297 aa28.73■■■□□ 2.19
ME3-205ENST00000526504 ZNF530Q6P9A1 599 aaPredicted RBP28.73■■■□□ 2.19
ME3-205ENST00000526504 PKD1L3Q7Z443 1732 aa28.72■■■□□ 2.19
ME3-205ENST00000526504 THSD7AQ9UPZ6 1657 aa28.72■■■□□ 2.19
ME3-205ENST00000526504 EXOSC9Q06265 439 aaKnown RBP28.71■■■□□ 2.19
ME3-205ENST00000526504 TNS2Q63HR2 1409 aa28.71■■■□□ 2.19
ME3-205ENST00000526504 PCDH11XQ9BZA7 1347 aa28.71■■■□□ 2.19
ME3-205ENST00000526504 PCDH11YQ9BZA8 1340 aa28.71■■■□□ 2.19
ME3-205ENST00000526504 LMOD3Q0VAK6 560 aa28.7■■■□□ 2.18
ME3-205ENST00000526504 SEPT12Q8IYM1 358 aa28.7■■■□□ 2.18
ME3-205ENST00000526504 LRRC37A3O60309 1634 aa28.69■■■□□ 2.18
ME3-205ENST00000526504 C1orf141Q5JVX7 400 aa28.69■■■□□ 2.18
ME3-205ENST00000526504 DDX54Q8TDD1 881 aaKnown RBP28.67■■■□□ 2.18
ME3-205ENST00000526504 FRAT1Q92837 279 aaPredicted RBP28.67■■■□□ 2.18
ME3-205ENST00000526504 CYP27B1O15528 508 aa28.67■■■□□ 2.18
ME3-205ENST00000526504 AKAP4Q5JQC9 854 aa28.67■■■□□ 2.18
ME3-205ENST00000526504 IFNL2Q8IZJ0 200 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms