RNA–Protein interactions for RNA: ENST00000526286.1

NANOG-202, Transcript of Nanog homeobox, humanhuman

TSL 1 (best) BASIC

Gene NANOG, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-202ENST00000526286 CHL1O00533 1208 aa13.06□□□□□ -0.32
NANOG-202ENST00000526286 MTHFSDQ2M296 383 aaKnown RBP13.06□□□□□ -0.32
NANOG-202ENST00000526286 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
NANOG-202ENST00000526286 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
NANOG-202ENST00000526286 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
NANOG-202ENST00000526286 TNNQ9UQP3 1299 aa13.06□□□□□ -0.32
NANOG-202ENST00000526286 STRCQ7RTU9 1775 aa13.06□□□□□ -0.32
NANOG-202ENST00000526286 MED1Q15648 1581 aaPredicted RBP13.06□□□□□ -0.32
NANOG-202ENST00000526286 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
NANOG-202ENST00000526286 MAP3K5Q99683 1374 aa13.06□□□□□ -0.32
NANOG-202ENST00000526286 MAPK8IP2Q13387 824 aaPredicted RBP13.05□□□□□ -0.32
NANOG-202ENST00000526286 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
NANOG-202ENST00000526286 FOXO3O43524 673 aa13.04□□□□□ -0.32
NANOG-202ENST00000526286 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
NANOG-202ENST00000526286 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
NANOG-202ENST00000526286 RWDD1Q9H446 243 aaPredicted RBP13.04□□□□□ -0.32
NANOG-202ENST00000526286 BABAM1Q9NWV8 329 aa13.04□□□□□ -0.32
NANOG-202ENST00000526286 FAM208AQ9UK61 1670 aaKnown RBP13.04□□□□□ -0.32
NANOG-202ENST00000526286 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
NANOG-202ENST00000526286 CRYBG1Q9Y4K1 1723 aa13.03□□□□□ -0.32
NANOG-202ENST00000526286 MCM10Q7L590 875 aa13.03□□□□□ -0.32
NANOG-202ENST00000526286 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
NANOG-202ENST00000526286 ITPRIPQ8IWB1 547 aa13.03□□□□□ -0.32
NANOG-202ENST00000526286 NPHP3Q7Z494 1330 aa13.03□□□□□ -0.32
NANOG-202ENST00000526286 TNS3Q68CZ2 1445 aa13.03□□□□□ -0.32
NANOG-202ENST00000526286 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.32
NANOG-202ENST00000526286 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 GCP02774 474 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 PDE4AP27815 886 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 BACH2Q9BYV9 841 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 RNF216Q9NWF9 866 aaPredicted RBP13.02□□□□□ -0.33
NANOG-202ENST00000526286 ABCC4O15439 1325 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 PLEKHG2Q9H7P9 1386 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 OVOS2A0A0G2JMS6 1433 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 PXDNQ92626 1479 aa13.02□□□□□ -0.33
NANOG-202ENST00000526286 IGHDP01880 384 aa13.01□□□□□ -0.33
NANOG-202ENST00000526286 HSPA2P54652 639 aa13.01□□□□□ -0.33
NANOG-202ENST00000526286 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
NANOG-202ENST00000526286 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
NANOG-202ENST00000526286 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
NANOG-202ENST00000526286 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
NANOG-202ENST00000526286 KDM4FA0A1W2PPD8 638 aa13□□□□□ -0.33
NANOG-202ENST00000526286 HDAC1Q13547 482 aaPredicted RBP13□□□□□ -0.33
NANOG-202ENST00000526286 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
NANOG-202ENST00000526286 PTPRCP08575 1304 aa12.99□□□□□ -0.33
NANOG-202ENST00000526286 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
NANOG-202ENST00000526286 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
NANOG-202ENST00000526286 ZBTB40Q9NUA8 1239 aa12.99□□□□□ -0.33
NANOG-202ENST00000526286 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
NANOG-202ENST00000526286 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
NANOG-202ENST00000526286 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
NANOG-202ENST00000526286 AMOTQ4VCS5 1084 aa12.98□□□□□ -0.33
NANOG-202ENST00000526286 NBPF6Q5VWK0 638 aa12.98□□□□□ -0.33
NANOG-202ENST00000526286 LMOD2Q6P5Q4 547 aa12.98□□□□□ -0.33
NANOG-202ENST00000526286 NBPF4Q96M43 638 aa12.98□□□□□ -0.33
NANOG-202ENST00000526286 COL18A1P39060 1754 aa12.98□□□□□ -0.33
NANOG-202ENST00000526286 ZBTB7CA1YPR0 619 aa12.97□□□□□ -0.33
NANOG-202ENST00000526286 ELL2O00472 640 aaPredicted RBP12.97□□□□□ -0.33
NANOG-202ENST00000526286 PLEKHO1Q53GL0 409 aaPredicted RBP12.97□□□□□ -0.33
NANOG-202ENST00000526286 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
NANOG-202ENST00000526286 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
NANOG-202ENST00000526286 RGS12O14924 1447 aa12.96□□□□□ -0.33
NANOG-202ENST00000526286 ADAMTS7Q9UKP4 1686 aa12.96□□□□□ -0.33
NANOG-202ENST00000526286 RGS3P49796 1198 aa12.96□□□□□ -0.33
NANOG-202ENST00000526286 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
NANOG-202ENST00000526286 SPATA31A3Q5VYP0 1347 aa12.95□□□□□ -0.34
NANOG-202ENST00000526286 RGPD5Q99666 1765 aa12.95□□□□□ -0.34
NANOG-202ENST00000526286 TAF7Q15545 349 aaPredicted RBP12.95□□□□□ -0.34
NANOG-202ENST00000526286 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
NANOG-202ENST00000526286 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
NANOG-202ENST00000526286 CPDO75976 1380 aa12.94□□□□□ -0.34
NANOG-202ENST00000526286 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
NANOG-202ENST00000526286 ERBB3P21860 1342 aa12.94□□□□□ -0.34
NANOG-202ENST00000526286 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
NANOG-202ENST00000526286 SKAP1Q86WV1 359 aa12.94□□□□□ -0.34
NANOG-202ENST00000526286 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
NANOG-202ENST00000526286 PDZRN3Q9UPQ7 1066 aa12.94□□□□□ -0.34
NANOG-202ENST00000526286 PXDNLA1KZ92 1463 aa12.93□□□□□ -0.34
NANOG-202ENST00000526286 NHSL1Q5SYE7 1610 aa12.93□□□□□ -0.34
NANOG-202ENST00000526286 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
NANOG-202ENST00000526286 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
NANOG-202ENST00000526286 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
NANOG-202ENST00000526286 LRRC59Q96AG4 307 aaKnown RBP12.93□□□□□ -0.34
NANOG-202ENST00000526286 STK31Q9BXU1 1019 aa12.93□□□□□ -0.34
NANOG-202ENST00000526286 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
NANOG-202ENST00000526286 SIPA1L3O60292 1781 aaPredicted RBP12.92□□□□□ -0.34
NANOG-202ENST00000526286 HOXB7P09629 217 aa12.92□□□□□ -0.34
NANOG-202ENST00000526286 KRT24Q2M2I5 525 aa12.92□□□□□ -0.34
NANOG-202ENST00000526286 C8orf34Q49A92 452 aa12.92□□□□□ -0.34
NANOG-202ENST00000526286 CCDC30Q5VVM6 783 aa12.92□□□□□ -0.34
NANOG-202ENST00000526286 BRINP3Q76B58 766 aa12.92□□□□□ -0.34
NANOG-202ENST00000526286 PKD1L3Q7Z443 1732 aa12.91□□□□□ -0.34
NANOG-202ENST00000526286 C1orf141Q5JVX7 400 aa12.91□□□□□ -0.34
NANOG-202ENST00000526286 ZNF335Q9H4Z2 1342 aaPredicted RBP12.9□□□□□ -0.34
NANOG-202ENST00000526286 GCC1Q96CN9 775 aa12.9□□□□□ -0.34
NANOG-202ENST00000526286 IPO9Q96P70 1041 aaKnown RBP12.9□□□□□ -0.34
NANOG-202ENST00000526286 MIS18AQ9NYP9 233 aa12.9□□□□□ -0.34
NANOG-202ENST00000526286 SOS2Q07890 1332 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms