RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
SMPD1-202ENST00000526280 KDRP35968 1356 aa17.35■□□□□ 0.37
SMPD1-202ENST00000526280 EP400Q96L91 3159 aa17.35■□□□□ 0.37
SMPD1-202ENST00000526280 NUDCQ9Y266 331 aa17.35■□□□□ 0.37
SMPD1-202ENST00000526280 FAM196AQ6ZSG2 479 aa17.34■□□□□ 0.37
SMPD1-202ENST00000526280 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
SMPD1-202ENST00000526280 ANP32CO43423 234 aa17.33■□□□□ 0.36
SMPD1-202ENST00000526280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
SMPD1-202ENST00000526280 PLEKHG2Q9H7P9 1386 aa17.33■□□□□ 0.36
SMPD1-202ENST00000526280 HMOX1P09601 288 aa17.32■□□□□ 0.36
SMPD1-202ENST00000526280 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
SMPD1-202ENST00000526280 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
SMPD1-202ENST00000526280 BCL9O00512 1426 aa17.31■□□□□ 0.36
SMPD1-202ENST00000526280 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
SMPD1-202ENST00000526280 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
SMPD1-202ENST00000526280 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-202ENST00000526280 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
SMPD1-202ENST00000526280 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-202ENST00000526280 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
SMPD1-202ENST00000526280 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
SMPD1-202ENST00000526280 CYP27B1O15528 508 aa17.28■□□□□ 0.36
SMPD1-202ENST00000526280 AMOTQ4VCS5 1084 aa17.28■□□□□ 0.36
SMPD1-202ENST00000526280 CCDC125Q86Z20 511 aa17.27■□□□□ 0.36
SMPD1-202ENST00000526280 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
SMPD1-202ENST00000526280 FCHSD2O94868 740 aa17.26■□□□□ 0.35
SMPD1-202ENST00000526280 TRIM37O94972 964 aa17.25■□□□□ 0.35
SMPD1-202ENST00000526280 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
SMPD1-202ENST00000526280 PHKG2P15735 406 aa17.24■□□□□ 0.35
SMPD1-202ENST00000526280 PRKAR2BP31323 418 aa17.24■□□□□ 0.35
SMPD1-202ENST00000526280 NKX1-1Q15270 411 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-202ENST00000526280 SBF2Q86WG5 1849 aa17.24■□□□□ 0.35
SMPD1-202ENST00000526280 ZNF530Q6P9A1 599 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-202ENST00000526280 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
SMPD1-202ENST00000526280 ACSBG1Q96GR2 724 aa17.22■□□□□ 0.35
SMPD1-202ENST00000526280 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
SMPD1-202ENST00000526280 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
SMPD1-202ENST00000526280 KAT6BQ8WYB5 2073 aa17.22■□□□□ 0.35
SMPD1-202ENST00000526280 KCNQ2O43526 872 aa17.21■□□□□ 0.35
SMPD1-202ENST00000526280 SF3B2Q13435 895 aaKnown RBP17.21■□□□□ 0.35
SMPD1-202ENST00000526280 MTHFSDQ2M296 383 aaKnown RBP17.21■□□□□ 0.35
SMPD1-202ENST00000526280 PTF1AQ7RTS3 328 aa17.21■□□□□ 0.35
SMPD1-202ENST00000526280 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.34
SMPD1-202ENST00000526280 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.34
SMPD1-202ENST00000526280 DIEXFQ68CQ4 756 aaKnown RBP17.21■□□□□ 0.34
SMPD1-202ENST00000526280 PRIM1P49642 420 aaKnown RBP17.2■□□□□ 0.34
SMPD1-202ENST00000526280 WDR43Q15061 677 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMPD1-202ENST00000526280 AKAP4Q5JQC9 854 aa17.2■□□□□ 0.34
SMPD1-202ENST00000526280 PLEKHF1Q96S99 279 aa17.2■□□□□ 0.34
SMPD1-202ENST00000526280 PNNQ9H307 717 aaKnown RBP17.2■□□□□ 0.34
SMPD1-202ENST00000526280 APBA3O96018 575 aa17.19■□□□□ 0.34
SMPD1-202ENST00000526280 GAS2L2Q8NHY3 880 aa17.19■□□□□ 0.34
SMPD1-202ENST00000526280 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
SMPD1-202ENST00000526280 ADAMTS8Q9UP79 889 aa17.19■□□□□ 0.34
SMPD1-202ENST00000526280 NHSQ6T4R5 1651 aa17.18■□□□□ 0.34
SMPD1-202ENST00000526280 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
SMPD1-202ENST00000526280 DEFB132Q7Z7B7 95 aa17.18■□□□□ 0.34
SMPD1-202ENST00000526280 MRS2Q9HD23 443 aa17.18■□□□□ 0.34
SMPD1-202ENST00000526280 DOT1LQ8TEK3 1739 aa17.17■□□□□ 0.34
SMPD1-202ENST00000526280 BAG6P46379 1132 aa17.17■□□□□ 0.34
SMPD1-202ENST00000526280 SYTL4Q96C24 671 aaPredicted RBP17.17■□□□□ 0.34
SMPD1-202ENST00000526280 NEFMP07197 916 aa17.16■□□□□ 0.34
SMPD1-202ENST00000526280 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
SMPD1-202ENST00000526280 PNISRQ8TF01 805 aaKnown RBP17.16■□□□□ 0.34
SMPD1-202ENST00000526280 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
SMPD1-202ENST00000526280 KDM6AO15550 1401 aaPredicted RBP17.15■□□□□ 0.34
SMPD1-202ENST00000526280 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
SMPD1-202ENST00000526280 PLSCR1O15162 318 aa17.15■□□□□ 0.34
SMPD1-202ENST00000526280 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
SMPD1-202ENST00000526280 EN1Q05925 392 aaPredicted RBP17.14■□□□□ 0.33
SMPD1-202ENST00000526280 CAMKK2Q96RR4 588 aa17.14■□□□□ 0.33
SMPD1-202ENST00000526280 LGR6Q9HBX8 967 aa17.14■□□□□ 0.33
SMPD1-202ENST00000526280 MAP3K5Q99683 1374 aa17.13■□□□□ 0.33
SMPD1-202ENST00000526280 MAPK8IP3Q9UPT6 1336 aa17.13■□□□□ 0.33
SMPD1-202ENST00000526280 BTAF1O14981 1849 aa17.13■□□□□ 0.33
SMPD1-202ENST00000526280 ITGB4P16144 1822 aa17.13■□□□□ 0.33
SMPD1-202ENST00000526280 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
SMPD1-202ENST00000526280 PIGBQ92521 554 aa17.13■□□□□ 0.33
SMPD1-202ENST00000526280 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
SMPD1-202ENST00000526280 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
SMPD1-202ENST00000526280 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
SMPD1-202ENST00000526280 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
SMPD1-202ENST00000526280 SCN11AQ9UI33 1791 aa17.11■□□□□ 0.33
SMPD1-202ENST00000526280 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
SMPD1-202ENST00000526280 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
SMPD1-202ENST00000526280 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
SMPD1-202ENST00000526280 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
SMPD1-202ENST00000526280 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
SMPD1-202ENST00000526280 CABP4P57796 275 aa17.1■□□□□ 0.33
SMPD1-202ENST00000526280 PROM2Q8N271 834 aa17.09■□□□□ 0.33
SMPD1-202ENST00000526280 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
SMPD1-202ENST00000526280 SLC52A2Q9HAB3 445 aa17.09■□□□□ 0.33
SMPD1-202ENST00000526280 TMPOP42166 694 aaKnown RBP17.08■□□□□ 0.32
SMPD1-202ENST00000526280 MIER1Q8N108 512 aa17.08■□□□□ 0.32
SMPD1-202ENST00000526280 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
SMPD1-202ENST00000526280 RGPD3A6NKT7 1758 aaPredicted RBP17.08■□□□□ 0.32
SMPD1-202ENST00000526280 RGPD4Q7Z3J3 1758 aa17.08■□□□□ 0.32
SMPD1-202ENST00000526280 CEMIPQ8WUJ3 1361 aa17.08■□□□□ 0.32
SMPD1-202ENST00000526280 VIRMAQ69YN4 1812 aaKnown RBP17.08■□□□□ 0.32
SMPD1-202ENST00000526280 SMARCC1Q92922 1105 aaPredicted RBP17.07■□□□□ 0.32
SMPD1-202ENST00000526280 ASAP1Q9ULH1 1129 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms