RNA–Protein interactions for RNA: ENST00000526245.1

ATXN3-213, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 352 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-213ENST00000526245 DGAT1O75907 488 aa6.92□□□□□ -1.3
ATXN3-213ENST00000526245 CCDC116Q8IYX3 515 aa6.92□□□□□ -1.3
ATXN3-213ENST00000526245 IGSF5Q9NSI5 407 aa6.92□□□□□ -1.3
ATXN3-213ENST00000526245 KANK4Q5T7N3 995 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-213ENST00000526245 SEPT12Q8IYM1 358 aa6.91□□□□□ -1.3
ATXN3-213ENST00000526245 NFATC2IPQ8NCF5 419 aa6.91□□□□□ -1.3
ATXN3-213ENST00000526245 ARID4AP29374 1257 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-213ENST00000526245 PPP1R26Q5T8A7 1209 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-213ENST00000526245 RNF20Q5VTR2 975 aa6.9□□□□□ -1.3
ATXN3-213ENST00000526245 LARP1Q6PKG0 1096 aaKnown RBP6.9□□□□□ -1.3
ATXN3-213ENST00000526245 USP17L3A6NCW0 530 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 USP17L4A6NCW7 530 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 USP17L5A8MUK1 530 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 ERVH48-1M5A8F1 160 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 PIK3CDO00329 1044 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 AVPP01185 164 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 WDR4P57081 412 aaKnown RBP6.89□□□□□ -1.31
ATXN3-213ENST00000526245 DHX9Q08211 1270 aaKnown RBP6.89□□□□□ -1.31
ATXN3-213ENST00000526245 TMEM164Q5U3C3 297 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 USP17L2Q6R6M4 530 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 Q6ZNB5 142 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 USP17L1Q7RTZ2 530 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 RNF135Q8IUD6 432 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 DEPDC4Q8N2C3 294 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 ITPKCQ96DU7 683 aa6.89□□□□□ -1.31
ATXN3-213ENST00000526245 KLF16Q9BXK1 252 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-213ENST00000526245 ZIC2O95409 532 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-213ENST00000526245 HSP90B1P14625 803 aaKnown RBP6.88□□□□□ -1.31
ATXN3-213ENST00000526245 TIMP2P16035 220 aa6.88□□□□□ -1.31
ATXN3-213ENST00000526245 PHTF2Q8N3S3 785 aa6.88□□□□□ -1.31
ATXN3-213ENST00000526245 SIRT1Q96EB6 747 aa6.88□□□□□ -1.31
ATXN3-213ENST00000526245 PUS7Q96PZ0 661 aaKnown RBP6.88□□□□□ -1.31
ATXN3-213ENST00000526245 TMPRSS4Q9NRS4 437 aa6.88□□□□□ -1.31
ATXN3-213ENST00000526245 MKRN1Q9UHC7 482 aaKnown RBP6.88□□□□□ -1.31
ATXN3-213ENST00000526245 ZMIZ1Q9ULJ6 1067 aa6.88□□□□□ -1.31
ATXN3-213ENST00000526245 EMILIN1Q9Y6C2 1016 aa6.88□□□□□ -1.31
ATXN3-213ENST00000526245 RASA1P20936 1047 aa6.87□□□□□ -1.31
ATXN3-213ENST00000526245 MYT1Q01538 1121 aa6.87□□□□□ -1.31
ATXN3-213ENST00000526245 TSGA10IPQ3SY00 556 aa6.87□□□□□ -1.31
ATXN3-213ENST00000526245 PHLDB3Q6NSJ2 640 aa6.87□□□□□ -1.31
ATXN3-213ENST00000526245 DNAJC14Q6Y2X3 702 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-213ENST00000526245 ZNF784Q8NCA9 323 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-213ENST00000526245 MRRFQ96E11 262 aaKnown RBP6.87□□□□□ -1.31
ATXN3-213ENST00000526245 CCDC85AQ96PX6 553 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-213ENST00000526245 ZFAND3Q9H8U3 227 aa6.87□□□□□ -1.31
ATXN3-213ENST00000526245 PGPEP1Q9NXJ5 209 aa6.87□□□□□ -1.31
ATXN3-213ENST00000526245 NOVA2Q9UNW9 492 aaKnown RBP6.87□□□□□ -1.31
ATXN3-213ENST00000526245 PCDHB11Q9Y5F2 797 aa6.87□□□□□ -1.31
ATXN3-213ENST00000526245 ATP5J2-PTCD1G3V325 749 aa6.86□□□□□ -1.31
ATXN3-213ENST00000526245 ST8SIA5O15466 376 aa6.86□□□□□ -1.31
ATXN3-213ENST00000526245 CAPN5O15484 640 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-213ENST00000526245 SSFA2P28290 1259 aa6.86□□□□□ -1.31
ATXN3-213ENST00000526245 CTC1Q2NKJ3 1217 aa6.86□□□□□ -1.31
ATXN3-213ENST00000526245 CCDC125Q86Z20 511 aa6.86□□□□□ -1.31
ATXN3-213ENST00000526245 PLEKHM2Q8IWE5 1019 aa6.86□□□□□ -1.31
ATXN3-213ENST00000526245 CYLDQ9NQC7 956 aa6.86□□□□□ -1.31
ATXN3-213ENST00000526245 DOLKQ9UPQ8 538 aa6.86□□□□□ -1.31
ATXN3-213ENST00000526245 RBM19Q9Y4C8 960 aaKnown RBP6.86□□□□□ -1.31
ATXN3-213ENST00000526245 AXIN1O15169 862 aa6.85□□□□□ -1.31
ATXN3-213ENST00000526245 LZTS3O60299 673 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-213ENST00000526245 SMCPP49901 116 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-213ENST00000526245 NCOA4Q13772 614 aa6.85□□□□□ -1.31
ATXN3-213ENST00000526245 EML3Q32P44 896 aa6.85□□□□□ -1.31
ATXN3-213ENST00000526245 CRIPAKQ8N1N5 446 aa6.85□□□□□ -1.31
ATXN3-213ENST00000526245 FAM200AQ8TCP9 573 aa6.85□□□□□ -1.31
ATXN3-213ENST00000526245 STK32AQ8WU08 396 aa6.85□□□□□ -1.31
ATXN3-213ENST00000526245 KIAA1522Q9P206 1035 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-213ENST00000526245 FAM196BA6NMK8 535 aa6.84□□□□□ -1.31
ATXN3-213ENST00000526245 MAP7D1Q3KQU3 841 aa6.84□□□□□ -1.31
ATXN3-213ENST00000526245 PLPP7Q8NBV4 271 aa6.84□□□□□ -1.31
ATXN3-213ENST00000526245 CDCA7Q9BWT1 371 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-213ENST00000526245 AAASQ9NRG9 546 aa6.84□□□□□ -1.31
ATXN3-213ENST00000526245 CHIC2Q9UKJ5 165 aa6.84□□□□□ -1.31
ATXN3-213ENST00000526245 SOWAHDA6NJG2 315 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L15C9J2P7 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L10C9JJH3 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L13C9JLJ4 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L12C9JPN9 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L11C9JVI0 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L21D6R901 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L18D6R9N7 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L22D6RA61 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L17D6RBQ6 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L19D6RCP7 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L20D6RJB6 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 LCE2BO14633 110 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 LILRA1O75019 489 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 ZNF16P17020 682 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-213ENST00000526245 SCTRP47872 440 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 ERVK-9P63128 1117 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 USP17L24Q0WX57 530 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 CBLBQ13191 982 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 OXLD1Q5BKU9 147 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 TRAF7Q6Q0C0 670 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 TRIM50Q86XT4 487 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 BCL2L13Q9BXK5 485 aa6.83□□□□□ -1.32
ATXN3-213ENST00000526245 BMP1P13497 986 aa6.82□□□□□ -1.32
ATXN3-213ENST00000526245 ADD1P35611 737 aaKnown RBP6.82□□□□□ -1.32
ATXN3-213ENST00000526245 ATP1A2P50993 1020 aa6.82□□□□□ -1.32
ATXN3-213ENST00000526245 CC2D2BQ6DHV5 1058 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms