RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 ZCRB1Q8TBF4 217 aaKnown RBP18.46■□□□□ 0.55
USH1C-203ENST00000526181 LRP5O75197 1615 aa18.45■□□□□ 0.54
USH1C-203ENST00000526181 NSD2O96028 1365 aa18.45■□□□□ 0.54
USH1C-203ENST00000526181 RAPGEF4Q8WZA2 1011 aa18.45■□□□□ 0.54
USH1C-203ENST00000526181 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
USH1C-203ENST00000526181 ANO8Q9HCE9 1232 aaPredicted RBP18.44■□□□□ 0.54
USH1C-203ENST00000526181 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
USH1C-203ENST00000526181 DOT1LQ8TEK3 1739 aa18.43■□□□□ 0.54
USH1C-203ENST00000526181 NCAPD2Q15021 1401 aa18.43■□□□□ 0.54
USH1C-203ENST00000526181 TATP17735 454 aaPredicted RBP18.43■□□□□ 0.54
USH1C-203ENST00000526181 TXNRD1Q16881 649 aa18.43■□□□□ 0.54
USH1C-203ENST00000526181 KNSTRNQ9Y448 316 aa18.43■□□□□ 0.54
USH1C-203ENST00000526181 BTAF1O14981 1849 aa18.42■□□□□ 0.54
USH1C-203ENST00000526181 MORC1Q86VD1 984 aa18.42■□□□□ 0.54
USH1C-203ENST00000526181 EYA1Q99502 592 aa18.42■□□□□ 0.54
USH1C-203ENST00000526181 EIF4A2Q14240 407 aaKnown RBP18.41■□□□□ 0.54
USH1C-203ENST00000526181 PRIM1P49642 420 aaKnown RBP18.4■□□□□ 0.54
USH1C-203ENST00000526181 AMER1Q5JTC6 1135 aaPredicted RBP18.4■□□□□ 0.54
USH1C-203ENST00000526181 SYTL4Q96C24 671 aaPredicted RBP18.4■□□□□ 0.54
USH1C-203ENST00000526181 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
USH1C-203ENST00000526181 PCDH11XQ9BZA7 1347 aa18.38■□□□□ 0.53
USH1C-203ENST00000526181 PCDH11YQ9BZA8 1340 aa18.38■□□□□ 0.53
USH1C-203ENST00000526181 CYP27B1O15528 508 aa18.37■□□□□ 0.53
USH1C-203ENST00000526181 PER1O15534 1290 aaPredicted RBP18.37■□□□□ 0.53
USH1C-203ENST00000526181 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
USH1C-203ENST00000526181 PDGFDQ9GZP0 370 aaPredicted RBP18.36■□□□□ 0.53
USH1C-203ENST00000526181 SRCAPQ6ZRS2 3230 aa18.35■□□□□ 0.53
USH1C-203ENST00000526181 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
USH1C-203ENST00000526181 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
USH1C-203ENST00000526181 IGSF1Q8N6C5 1336 aa18.34■□□□□ 0.53
USH1C-203ENST00000526181 CASZ1Q86V15 1759 aa18.34■□□□□ 0.53
USH1C-203ENST00000526181 TOGARAM1Q9Y4F4 1720 aa18.34■□□□□ 0.53
USH1C-203ENST00000526181 KCNQ4P56696 695 aa18.33■□□□□ 0.52
USH1C-203ENST00000526181 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
USH1C-203ENST00000526181 STK32BQ9NY57 414 aa18.33■□□□□ 0.52
USH1C-203ENST00000526181 SLC15A2Q16348 729 aa18.32■□□□□ 0.52
USH1C-203ENST00000526181 SPG7Q9UQ90 795 aa18.32■□□□□ 0.52
USH1C-203ENST00000526181 ZNF827Q17R98 1081 aa18.31■□□□□ 0.52
USH1C-203ENST00000526181 AEBP1Q8IUX7 1158 aa18.3■□□□□ 0.52
USH1C-203ENST00000526181 LY75O60449 1722 aa18.29■□□□□ 0.52
USH1C-203ENST00000526181 PHKG2P15735 406 aa18.28■□□□□ 0.52
USH1C-203ENST00000526181 IL13P35225 146 aa18.28■□□□□ 0.52
USH1C-203ENST00000526181 MTHFSP49914 203 aa18.28■□□□□ 0.52
USH1C-203ENST00000526181 NKX1-1Q15270 411 aaPredicted RBP18.28■□□□□ 0.52
USH1C-203ENST00000526181 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
USH1C-203ENST00000526181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.28■□□□□ 0.52
USH1C-203ENST00000526181 ZBTB7AO95365 584 aa18.27■□□□□ 0.52
USH1C-203ENST00000526181 SLC27A3Q5K4L6 730 aa18.27■□□□□ 0.52
USH1C-203ENST00000526181 SPON1Q9HCB6 807 aa18.27■□□□□ 0.52
USH1C-203ENST00000526181 AKT1S1Q96B36 256 aa18.26■□□□□ 0.51
USH1C-203ENST00000526181 CCNL1Q9UK58 526 aaPredicted RBP18.26■□□□□ 0.51
USH1C-203ENST00000526181 NPC1L1Q9UHC9 1359 aa18.26■□□□□ 0.51
USH1C-203ENST00000526181 SULT6B1Q6IMI4 303 aa18.25■□□□□ 0.51
USH1C-203ENST00000526181 IFNL2Q8IZJ0 200 aa18.25■□□□□ 0.51
USH1C-203ENST00000526181 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
USH1C-203ENST00000526181 ITGB4P16144 1822 aa18.24■□□□□ 0.51
USH1C-203ENST00000526181 PIGBQ92521 554 aa18.24■□□□□ 0.51
USH1C-203ENST00000526181 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
USH1C-203ENST00000526181 KDRP35968 1356 aa18.23■□□□□ 0.51
USH1C-203ENST00000526181 ATF5Q9Y2D1 282 aaPredicted RBP18.23■□□□□ 0.51
USH1C-203ENST00000526181 COL3A1P02461 1466 aaPredicted RBP18.21■□□□□ 0.51
USH1C-203ENST00000526181 PLEKHO1Q53GL0 409 aaPredicted RBP18.21■□□□□ 0.51
USH1C-203ENST00000526181 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
USH1C-203ENST00000526181 KAT6BQ8WYB5 2073 aa18.21■□□□□ 0.51
USH1C-203ENST00000526181 PNPLA7Q6ZV29 1317 aa18.21■□□□□ 0.51
USH1C-203ENST00000526181 C5P01031 1676 aa18.2■□□□□ 0.5
USH1C-203ENST00000526181 PTGER2P43116 358 aa18.2■□□□□ 0.5
USH1C-203ENST00000526181 TMOD3Q9NYL9 352 aa18.2■□□□□ 0.5
USH1C-203ENST00000526181 PPP1R1BQ9UD71 204 aaPredicted RBP18.2■□□□□ 0.5
USH1C-203ENST00000526181 TUBGCP6Q96RT7 1819 aa18.2■□□□□ 0.5
USH1C-203ENST00000526181 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
USH1C-203ENST00000526181 DIAPH1O60610 1272 aaKnown RBP18.19■□□□□ 0.5
USH1C-203ENST00000526181 HMOX1P09601 288 aa18.19■□□□□ 0.5
USH1C-203ENST00000526181 AMOTQ4VCS5 1084 aa18.19■□□□□ 0.5
USH1C-203ENST00000526181 MTFR1LQ9H019 292 aa18.19■□□□□ 0.5
USH1C-203ENST00000526181 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
USH1C-203ENST00000526181 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
USH1C-203ENST00000526181 QSER1Q2KHR3 1735 aa18.18■□□□□ 0.5
USH1C-203ENST00000526181 SMARCC1Q92922 1105 aaPredicted RBP18.17■□□□□ 0.5
USH1C-203ENST00000526181 DCAF5Q96JK2 942 aa18.17■□□□□ 0.5
USH1C-203ENST00000526181 SGIP1Q9BQI5 828 aa18.17■□□□□ 0.5
USH1C-203ENST00000526181 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
USH1C-203ENST00000526181 C1orf141Q5JVX7 400 aa18.15■□□□□ 0.5
USH1C-203ENST00000526181 ATG3Q9NT62 314 aa18.15■□□□□ 0.5
USH1C-203ENST00000526181 C4BP0C0L5 1744 aa18.14■□□□□ 0.49
USH1C-203ENST00000526181 TAF1LQ8IZX4 1826 aa18.14■□□□□ 0.49
USH1C-203ENST00000526181 LOC102724428A0A0B4J2F2 783 aa18.13■□□□□ 0.49
USH1C-203ENST00000526181 ERVV-2B6SEH9 535 aa18.13■□□□□ 0.49
USH1C-203ENST00000526181 U2SURPO15042 1029 aaKnown RBP18.13■□□□□ 0.49
USH1C-203ENST00000526181 SIK1P57059 783 aa18.13■□□□□ 0.49
USH1C-203ENST00000526181 COL23A1Q86Y22 540 aaPredicted RBP18.13■□□□□ 0.49
USH1C-203ENST00000526181 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
USH1C-203ENST00000526181 ITPK1Q13572 414 aa18.12■□□□□ 0.49
USH1C-203ENST00000526181 SMIM5Q71RC9 77 aa18.12■□□□□ 0.49
USH1C-203ENST00000526181 AMIGO3Q86WK7 504 aa18.12■□□□□ 0.49
USH1C-203ENST00000526181 LINC00116Q8NCU8 138 aa18.12■□□□□ 0.49
USH1C-203ENST00000526181 MSH5O43196 834 aa18.11■□□□□ 0.49
USH1C-203ENST00000526181 CABP4P57796 275 aa18.11■□□□□ 0.49
USH1C-203ENST00000526181 MTHFSDQ2M296 383 aaKnown RBP18.11■□□□□ 0.49
USH1C-203ENST00000526181 ATP6V1AP38606 617 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms