RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 GADD45BO75293 160 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 HSP90AB2PQ58FF8 381 aa8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 HDGFL1Q5TGJ6 251 aa8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 PRPF40BQ6NWY9 871 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 G2E3Q7L622 706 aa8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 MRPL50Q8N5N7 158 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 TRMT1Q9NXH9 659 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 ATP6V1DQ9Y5K8 247 aa8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 GUCY1B3Q02153 619 aa8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 HOMER1Q86YM7 354 aa8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 TRMT2AQ8IZ69 625 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 DNAJC2Q99543 621 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 CWC22Q9HCG8 908 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 TMEM63CQ9P1W3 806 aa8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-207ENST00000525962 CSB-PGBD3P0DP91 1061 aa8.34□□□□□ -1.08
TGFBR3-207ENST00000525962 GSPT1P15170 499 aaKnown RBP8.34□□□□□ -1.08
TGFBR3-207ENST00000525962 MX1P20591 662 aa8.34□□□□□ -1.08
TGFBR3-207ENST00000525962 PPP4R3BQ5MIZ7 849 aa8.34□□□□□ -1.08
TGFBR3-207ENST00000525962 LARP1BQ659C4 914 aaKnown RBP8.34□□□□□ -1.08
TGFBR3-207ENST00000525962 SASS6Q6UVJ0 657 aa8.34□□□□□ -1.08
TGFBR3-207ENST00000525962 USP48Q86UV5 1035 aa8.34□□□□□ -1.08
TGFBR3-207ENST00000525962 UHRF1BP1Q6BDS2 1440 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 TRAPPC8Q9Y2L5 1435 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 NEUROD6Q96NK8 337 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 TOMM22Q9NS69 142 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 POLKQ9UBT6 870 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 FSD1Q9BTV5 496 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 TMX1Q9H3N1 280 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 SYCP2Q9BX26 1530 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 ATP2B1P20020 1258 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 CHMP4CQ96CF2 233 aa8.33□□□□□ -1.08
TGFBR3-207ENST00000525962 FSD2A1L4K1 749 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 CT47B1P0C2W7 299 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 GPATCH3Q96I76 525 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 CCDC8Q9H0W5 538 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 C14orf93Q9H972 538 aaKnown RBP8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 KIF14Q15058 1648 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 ISM2Q6H9L7 571 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 RAB11FIP4Q86YS3 637 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 CCDC85AQ96PX6 553 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 USP26Q9BXU7 913 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 LRRC2Q9BYS8 371 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 ISY1Q9ULR0 285 aaKnown RBP8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 ALDH1L2Q3SY69 923 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 TTLL5Q6EMB2 1281 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 RPAP2Q8IXW5 612 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 CLASRPQ8N2M8 674 aaKnown RBP8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 SNX21Q969T3 373 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 KIF3AQ9Y496 699 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 KDM5CP41229 1560 aa8.32□□□□□ -1.08
TGFBR3-207ENST00000525962 WDR33Q9C0J8 1336 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 MYL6BP14649 208 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 RBM25P49756 843 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 LRSAM1Q6UWE0 723 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 SYTL4Q96C24 671 aaPredicted RBP8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 NUDT16Q96DE0 195 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 STAC3Q96MF2 364 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 SDF4Q9BRK5 362 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 BOLA2Q9H3K6 86 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 OFD1O75665 1012 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 PDE1AP54750 535 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 G3BP1Q13283 466 aaKnown RBP eCLIP8.31□□□□□ -1.087e-7■□□□□ 9.5
TGFBR3-207ENST00000525962 PDCL2Q8N4E4 241 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 LMBRD1Q9NUN5 540 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 ZKSCAN5Q9Y2L8 839 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 DNM1Q05193 864 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 ZFP91Q96JP5 570 aaPredicted RBP8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 TNMDQ9H2S6 317 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
TGFBR3-207ENST00000525962 POLR3AO14802 1390 aaPredicted RBP8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 PES1O00541 588 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 HTATSF1O43719 755 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 GNAI3P08754 354 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 TAF7Q15545 349 aaPredicted RBP8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 CNTROBQ8N137 903 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 GPT2Q8TD30 523 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 MAP7D2Q96T17 732 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 PDRG1Q9NUG6 133 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 DISP1Q96F81 1524 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 AACSQ86V21 672 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 DNMT1P26358 1616 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 CEP85Q6P2H3 762 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 SIRT2Q8IXJ6 389 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 PIK3C2GO75747 1445 aa8.3□□□□□ -1.08
TGFBR3-207ENST00000525962 SMC2O95347 1197 aa8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 CCDC30Q5VVM6 783 aa8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 RUFY2Q8WXA3 655 aa8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 CGNQ9P2M7 1197 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 RAPGEF6Q8TEU7 1601 aa8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 NOLC1Q14978 699 aaKnown RBP eCLIP8.29□□□□□ -1.085e-7■■□□□ 13.4
TGFBR3-207ENST00000525962 HSP90AA4PQ58FG1 418 aa8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 ABTB2Q8N961 1025 aa8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 CYP46A1Q9Y6A2 500 aa8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 CFAP65Q6ZU64 1925 aaKnown RBP8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 CCDC192P0DO97 292 aa8.29□□□□□ -1.08
TGFBR3-207ENST00000525962 GJB2P29033 226 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms