RNA–Protein interactions for RNA: ENST00000525945.1

GRAMD1B-205, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-205ENST00000525945 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
GRAMD1B-205ENST00000525945 HDGFL2Q7Z4V5 671 aaPredicted RBP11.62□□□□□ -0.55
GRAMD1B-205ENST00000525945 NME9Q86XW9 330 aa11.62□□□□□ -0.55
GRAMD1B-205ENST00000525945 TUBGCP6Q96RT7 1819 aa11.61□□□□□ -0.55
GRAMD1B-205ENST00000525945 DDX54Q8TDD1 881 aaKnown RBP11.61□□□□□ -0.55
GRAMD1B-205ENST00000525945 ANKRD36BQ8N2N9 1353 aa11.61□□□□□ -0.55
GRAMD1B-205ENST00000525945 CD163L1Q9NR16 1453 aa11.61□□□□□ -0.55
GRAMD1B-205ENST00000525945 LY75O60449 1722 aa11.6□□□□□ -0.55
GRAMD1B-205ENST00000525945 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
GRAMD1B-205ENST00000525945 SYTL4Q96C24 671 aaPredicted RBP11.6□□□□□ -0.55
GRAMD1B-205ENST00000525945 HMGB2P26583 209 aaKnown RBP11.59□□□□□ -0.55
GRAMD1B-205ENST00000525945 NLGN2Q8NFZ4 835 aa11.59□□□□□ -0.55
GRAMD1B-205ENST00000525945 TMC1Q8TDI8 760 aa11.59□□□□□ -0.55
GRAMD1B-205ENST00000525945 IP6K1Q92551 441 aa11.59□□□□□ -0.55
GRAMD1B-205ENST00000525945 TERF2IPQ9NYB0 399 aa11.59□□□□□ -0.55
GRAMD1B-205ENST00000525945 ERICH6Q7L0X2 663 aa11.58□□□□□ -0.56
GRAMD1B-205ENST00000525945 PRIM1P49642 420 aaKnown RBP11.57□□□□□ -0.56
GRAMD1B-205ENST00000525945 CCNL1Q9UK58 526 aaPredicted RBP11.57□□□□□ -0.56
GRAMD1B-205ENST00000525945 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
GRAMD1B-205ENST00000525945 NSD2O96028 1365 aa11.56□□□□□ -0.56
GRAMD1B-205ENST00000525945 USP47Q96K76 1375 aa11.56□□□□□ -0.56
GRAMD1B-205ENST00000525945 YBX3P16989 372 aaKnown RBP eCLIP11.56□□□□□ -0.56
GRAMD1B-205ENST00000525945 KCNQ4P56696 695 aa11.56□□□□□ -0.56
GRAMD1B-205ENST00000525945 ZCRB1Q8TBF4 217 aaKnown RBP11.56□□□□□ -0.56
GRAMD1B-205ENST00000525945 PUS7Q96PZ0 661 aaKnown RBP11.56□□□□□ -0.56
GRAMD1B-205ENST00000525945 GOLGB1Q14789 3259 aaKnown RBP11.56□□□□□ -0.56
GRAMD1B-205ENST00000525945 KAT6BQ8WYB5 2073 aa11.55□□□□□ -0.56
GRAMD1B-205ENST00000525945 ATP10DQ9P241 1426 aa11.55□□□□□ -0.56
GRAMD1B-205ENST00000525945 LTV1Q96GA3 475 aaPredicted RBP11.55□□□□□ -0.56
GRAMD1B-205ENST00000525945 SLC12A5Q9H2X9 1139 aa11.55□□□□□ -0.56
GRAMD1B-205ENST00000525945 COL23A1Q86Y22 540 aaPredicted RBP11.54□□□□□ -0.56
GRAMD1B-205ENST00000525945 FLAD1Q8NFF5 587 aa11.54□□□□□ -0.56
GRAMD1B-205ENST00000525945 SIN3AQ96ST3 1273 aa11.54□□□□□ -0.56
GRAMD1B-205ENST00000525945 CARD11Q9BXL7 1154 aa11.54□□□□□ -0.56
GRAMD1B-205ENST00000525945 GPBP1L1Q9HC44 474 aaPredicted RBP11.54□□□□□ -0.56
GRAMD1B-205ENST00000525945 CD2APQ9Y5K6 639 aa11.54□□□□□ -0.56
GRAMD1B-205ENST00000525945 C5P01031 1676 aa11.54□□□□□ -0.56
GRAMD1B-205ENST00000525945 CGNL1Q0VF96 1302 aa11.54□□□□□ -0.56
GRAMD1B-205ENST00000525945 HOXC9P31274 260 aa11.53□□□□□ -0.56
GRAMD1B-205ENST00000525945 AMPHP49418 695 aa11.53□□□□□ -0.56
GRAMD1B-205ENST00000525945 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
GRAMD1B-205ENST00000525945 COG3Q96JB2 828 aa11.53□□□□□ -0.56
GRAMD1B-205ENST00000525945 MEGF6O75095 1541 aa11.53□□□□□ -0.56
GRAMD1B-205ENST00000525945 MAP3K19Q56UN5 1328 aa11.53□□□□□ -0.56
GRAMD1B-205ENST00000525945 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
GRAMD1B-205ENST00000525945 ADCY9O60503 1353 aa11.52□□□□□ -0.57
GRAMD1B-205ENST00000525945 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
GRAMD1B-205ENST00000525945 PRKCSHP14314 528 aaPredicted RBP11.51□□□□□ -0.57
GRAMD1B-205ENST00000525945 MSL1Q68DK7 614 aa11.51□□□□□ -0.57
GRAMD1B-205ENST00000525945 RGPD2P0DJD1 1756 aa11.51□□□□□ -0.57
GRAMD1B-205ENST00000525945 HSPA6P17066 643 aa11.5□□□□□ -0.57
GRAMD1B-205ENST00000525945 RAPGEF4Q8WZA2 1011 aa11.5□□□□□ -0.57
GRAMD1B-205ENST00000525945 NSD3Q9BZ95 1437 aa11.5□□□□□ -0.57
GRAMD1B-205ENST00000525945 PCDH11XQ9BZA7 1347 aa11.49□□□□□ -0.57
GRAMD1B-205ENST00000525945 PCDH11YQ9BZA8 1340 aa11.49□□□□□ -0.57
GRAMD1B-205ENST00000525945 PALLDQ8WX93 1383 aa11.49□□□□□ -0.57
GRAMD1B-205ENST00000525945 TAF1LQ8IZX4 1826 aa11.49□□□□□ -0.57
GRAMD1B-205ENST00000525945 TATP17735 454 aaPredicted RBP11.48□□□□□ -0.57
GRAMD1B-205ENST00000525945 C4BP0C0L5 1744 aa11.48□□□□□ -0.57
GRAMD1B-205ENST00000525945 CEP350Q5VT06 3117 aa11.47□□□□□ -0.57
GRAMD1B-205ENST00000525945 NBPF6Q5VWK0 638 aa11.47□□□□□ -0.57
GRAMD1B-205ENST00000525945 ZNF526Q8TF50 670 aaPredicted RBP11.47□□□□□ -0.57
GRAMD1B-205ENST00000525945 SMARCC1Q92922 1105 aaPredicted RBP11.47□□□□□ -0.57
GRAMD1B-205ENST00000525945 AK7Q96M32 723 aa11.47□□□□□ -0.57
GRAMD1B-205ENST00000525945 NBPF4Q96M43 638 aa11.47□□□□□ -0.57
GRAMD1B-205ENST00000525945 IGSF1Q8N6C5 1336 aa11.46□□□□□ -0.57
GRAMD1B-205ENST00000525945 KIF24Q5T7B8 1368 aa11.45□□□□□ -0.58
GRAMD1B-205ENST00000525945 FBLN1P23142 703 aa11.45□□□□□ -0.58
GRAMD1B-205ENST00000525945 RRS1Q15050 365 aaKnown RBP11.45□□□□□ -0.58
GRAMD1B-205ENST00000525945 MPRIPQ6WCQ1 1025 aa11.45□□□□□ -0.58
GRAMD1B-205ENST00000525945 USHBP1Q8N6Y0 703 aa11.45□□□□□ -0.58
GRAMD1B-205ENST00000525945 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
GRAMD1B-205ENST00000525945 INSRP06213 1382 aa11.44□□□□□ -0.58
GRAMD1B-205ENST00000525945 TONSLQ96HA7 1378 aa11.44□□□□□ -0.58
GRAMD1B-205ENST00000525945 SSFA2P28290 1259 aa11.44□□□□□ -0.58
GRAMD1B-205ENST00000525945 CICQ96RK0 1608 aaPredicted RBP11.44□□□□□ -0.58
GRAMD1B-205ENST00000525945 UBR3Q6ZT12 1888 aa11.44□□□□□ -0.58
GRAMD1B-205ENST00000525945 PKD1L3Q7Z443 1732 aa11.43□□□□□ -0.58
GRAMD1B-205ENST00000525945 FLT4P35916 1363 aa11.43□□□□□ -0.58
GRAMD1B-205ENST00000525945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
GRAMD1B-205ENST00000525945 PHF14O94880 888 aa11.43□□□□□ -0.58
GRAMD1B-205ENST00000525945 TESK2Q96S53 571 aa11.43□□□□□ -0.58
GRAMD1B-205ENST00000525945 ITGB4P16144 1822 aa11.43□□□□□ -0.58
GRAMD1B-205ENST00000525945 FYB1O15117 783 aa11.42□□□□□ -0.58
GRAMD1B-205ENST00000525945 APLP1P51693 650 aa11.42□□□□□ -0.58
GRAMD1B-205ENST00000525945 GGNBP2Q9H3C7 697 aa11.42□□□□□ -0.58
GRAMD1B-205ENST00000525945 KIF20BQ96Q89 1820 aa11.42□□□□□ -0.58
GRAMD1B-205ENST00000525945 ST20-MTHFSA0A0A6YYL1 179 aa11.41□□□□□ -0.58
GRAMD1B-205ENST00000525945 KIF3CO14782 793 aa11.41□□□□□ -0.58
GRAMD1B-205ENST00000525945 CYP27B1O15528 508 aa11.41□□□□□ -0.58
GRAMD1B-205ENST00000525945 HSP90AB2PQ58FF8 381 aa11.41□□□□□ -0.58
GRAMD1B-205ENST00000525945 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
GRAMD1B-205ENST00000525945 SIK1P57059 783 aa11.4□□□□□ -0.58
GRAMD1B-205ENST00000525945 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
GRAMD1B-205ENST00000525945 PIGBQ92521 554 aa11.4□□□□□ -0.58
GRAMD1B-205ENST00000525945 WWC3Q9ULE0 1092 aa11.4□□□□□ -0.58
GRAMD1B-205ENST00000525945 SPG7Q9UQ90 795 aa11.4□□□□□ -0.58
GRAMD1B-205ENST00000525945 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
GRAMD1B-205ENST00000525945 TOMM70O94826 608 aa11.39□□□□□ -0.59
GRAMD1B-205ENST00000525945 AMIGO3Q86WK7 504 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms