RNA–Protein interactions for RNA: ENST00000525801.1

ROM1-202, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 3

Gene ROM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-202ENST00000525801 BTAF1O14981 1849 aa20.4■□□□□ 0.86
ROM1-202ENST00000525801 PPM1GO15355 546 aaPredicted RBP20.4■□□□□ 0.86
ROM1-202ENST00000525801 POLD1P28340 1107 aa20.4■□□□□ 0.86
ROM1-202ENST00000525801 RAPGEF4Q8WZA2 1011 aa20.4■□□□□ 0.86
ROM1-202ENST00000525801 CCNL1Q9UK58 526 aaPredicted RBP20.4■□□□□ 0.86
ROM1-202ENST00000525801 SLC27A3Q5K4L6 730 aa20.39■□□□□ 0.85
ROM1-202ENST00000525801 PNPLA7Q6ZV29 1317 aa20.38■□□□□ 0.85
ROM1-202ENST00000525801 TATP17735 454 aaPredicted RBP20.38■□□□□ 0.85
ROM1-202ENST00000525801 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
ROM1-202ENST00000525801 ZNF784Q8NCA9 323 aaPredicted RBP20.38■□□□□ 0.85
ROM1-202ENST00000525801 ANKRD36BQ8N2N9 1353 aa20.37■□□□□ 0.85
ROM1-202ENST00000525801 USP47Q96K76 1375 aa20.37■□□□□ 0.85
ROM1-202ENST00000525801 MSL1Q68DK7 614 aa20.37■□□□□ 0.85
ROM1-202ENST00000525801 USP54Q70EL1 1684 aa20.37■□□□□ 0.85
ROM1-202ENST00000525801 MEGF6O75095 1541 aa20.37■□□□□ 0.85
ROM1-202ENST00000525801 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
ROM1-202ENST00000525801 MPRIPQ6WCQ1 1025 aa20.35■□□□□ 0.85
ROM1-202ENST00000525801 UTRNP46939 3433 aa20.34■□□□□ 0.85
ROM1-202ENST00000525801 TRIM26Q12899 539 aaPredicted RBP20.34■□□□□ 0.85
ROM1-202ENST00000525801 NLGN2Q8NFZ4 835 aa20.33■□□□□ 0.85
ROM1-202ENST00000525801 SMG6Q86US8 1419 aaKnown RBP20.33■□□□□ 0.84
ROM1-202ENST00000525801 SLC16A10Q8TF71 515 aa20.32■□□□□ 0.84
ROM1-202ENST00000525801 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
ROM1-202ENST00000525801 NSD2O96028 1365 aa20.32■□□□□ 0.84
ROM1-202ENST00000525801 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
ROM1-202ENST00000525801 COL23A1Q86Y22 540 aaPredicted RBP20.31■□□□□ 0.84
ROM1-202ENST00000525801 PCGF6Q9BYE7 350 aa20.31■□□□□ 0.84
ROM1-202ENST00000525801 RGPD2P0DJD1 1756 aa20.31■□□□□ 0.84
ROM1-202ENST00000525801 CDCA8Q53HL2 280 aa20.3■□□□□ 0.84
ROM1-202ENST00000525801 CARD14Q9BXL6 1004 aa20.3■□□□□ 0.84
ROM1-202ENST00000525801 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
ROM1-202ENST00000525801 SMIM5Q71RC9 77 aa20.29■□□□□ 0.84
ROM1-202ENST00000525801 DOT1LQ8TEK3 1739 aa20.29■□□□□ 0.84
ROM1-202ENST00000525801 RTL1A6NKG5 1358 aa20.29■□□□□ 0.84
ROM1-202ENST00000525801 WWC3Q9ULE0 1092 aa20.28■□□□□ 0.84
ROM1-202ENST00000525801 NSD3Q9BZ95 1437 aa20.27■□□□□ 0.84
ROM1-202ENST00000525801 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
ROM1-202ENST00000525801 CYP27B1O15528 508 aa20.26■□□□□ 0.83
ROM1-202ENST00000525801 PHF14O94880 888 aa20.26■□□□□ 0.83
ROM1-202ENST00000525801 PCDH11XQ9BZA7 1347 aa20.26■□□□□ 0.83
ROM1-202ENST00000525801 PCDH11YQ9BZA8 1340 aa20.26■□□□□ 0.83
ROM1-202ENST00000525801 INSRP06213 1382 aa20.25■□□□□ 0.83
ROM1-202ENST00000525801 FLT4P35916 1363 aa20.25■□□□□ 0.83
ROM1-202ENST00000525801 SENP3-EIF4A1A0A087X0R7 540 aa20.25■□□□□ 0.83
ROM1-202ENST00000525801 CGNL1Q0VF96 1302 aa20.25■□□□□ 0.83
ROM1-202ENST00000525801 PALLDQ8WX93 1383 aa20.23■□□□□ 0.83
ROM1-202ENST00000525801 AK7Q96M32 723 aa20.23■□□□□ 0.83
ROM1-202ENST00000525801 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
ROM1-202ENST00000525801 YBX3P16989 372 aaKnown RBP eCLIP20.21■□□□□ 0.83
ROM1-202ENST00000525801 PIGBQ92521 554 aa20.21■□□□□ 0.83
ROM1-202ENST00000525801 SPG7Q9UQ90 795 aa20.2■□□□□ 0.82
ROM1-202ENST00000525801 SHANK3Q9BYB0 1731 aa20.19■□□□□ 0.82
ROM1-202ENST00000525801 C1QTNF8P60827 252 aa20.19■□□□□ 0.82
ROM1-202ENST00000525801 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
ROM1-202ENST00000525801 EYA1Q99502 592 aa20.18■□□□□ 0.82
ROM1-202ENST00000525801 GOLGB1Q14789 3259 aaKnown RBP20.17■□□□□ 0.82
ROM1-202ENST00000525801 AMIGO3Q86WK7 504 aa20.17■□□□□ 0.82
ROM1-202ENST00000525801 TUBGCP6Q96RT7 1819 aa20.17■□□□□ 0.82
ROM1-202ENST00000525801 GIGYF1O75420 1035 aaPredicted RBP20.16■□□□□ 0.82
ROM1-202ENST00000525801 TMOD3Q9NYL9 352 aa20.16■□□□□ 0.82
ROM1-202ENST00000525801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.15■□□□□ 0.82
ROM1-202ENST00000525801 FLAD1Q8NFF5 587 aa20.15■□□□□ 0.82
ROM1-202ENST00000525801 POLKQ9UBT6 870 aa20.15■□□□□ 0.82
ROM1-202ENST00000525801 ASAP1Q9ULH1 1129 aa20.15■□□□□ 0.82
ROM1-202ENST00000525801 LY75O60449 1722 aa20.15■□□□□ 0.82
ROM1-202ENST00000525801 KIF20BQ96Q89 1820 aa20.15■□□□□ 0.82
ROM1-202ENST00000525801 GRIN3BO60391 1043 aa20.14■□□□□ 0.81
ROM1-202ENST00000525801 LINC00116Q8NCU8 138 aa20.14■□□□□ 0.81
ROM1-202ENST00000525801 ZNF526Q8TF50 670 aaPredicted RBP20.14■□□□□ 0.81
ROM1-202ENST00000525801 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
ROM1-202ENST00000525801 ATP6V1AP38606 617 aa20.13■□□□□ 0.81
ROM1-202ENST00000525801 LOC102724428A0A0B4J2F2 783 aa20.12■□□□□ 0.81
ROM1-202ENST00000525801 GNPATO15228 680 aa20.12■□□□□ 0.81
ROM1-202ENST00000525801 SIK1P57059 783 aa20.12■□□□□ 0.81
ROM1-202ENST00000525801 EIF4A2Q14240 407 aaKnown RBP20.12■□□□□ 0.81
ROM1-202ENST00000525801 RBM42Q9BTD8 480 aaKnown RBP20.12■□□□□ 0.81
ROM1-202ENST00000525801 KIF24Q5T7B8 1368 aa20.11■□□□□ 0.81
ROM1-202ENST00000525801 IFNL2Q8IZJ0 200 aa20.11■□□□□ 0.81
ROM1-202ENST00000525801 PHKG2P15735 406 aa20.1■□□□□ 0.81
ROM1-202ENST00000525801 ITPK1Q13572 414 aa20.1■□□□□ 0.81
ROM1-202ENST00000525801 HSPA5P11021 654 aaKnown RBP20.09■□□□□ 0.81
ROM1-202ENST00000525801 NKX1-1Q15270 411 aaPredicted RBP20.09■□□□□ 0.81
ROM1-202ENST00000525801 PANK3Q9H999 370 aa20.09■□□□□ 0.81
ROM1-202ENST00000525801 CD2APQ9Y5K6 639 aa20.09■□□□□ 0.81
ROM1-202ENST00000525801 QSER1Q2KHR3 1735 aa20.09■□□□□ 0.81
ROM1-202ENST00000525801 CHD4Q14839 1912 aa20.08■□□□□ 0.81
ROM1-202ENST00000525801 ATG3Q9NT62 314 aa20.08■□□□□ 0.81
ROM1-202ENST00000525801 C5P01031 1676 aa20.07■□□□□ 0.8
ROM1-202ENST00000525801 IGSF1Q8N6C5 1336 aa20.06■□□□□ 0.8
ROM1-202ENST00000525801 HMGB2P26583 209 aaKnown RBP20.06■□□□□ 0.8
ROM1-202ENST00000525801 TOGARAM1Q9Y4F4 1720 aa20.06■□□□□ 0.8
ROM1-202ENST00000525801 EIF4G2P78344 907 aaKnown RBP eCLIP20.05■□□□□ 0.8
ROM1-202ENST00000525801 C4BP0C0L5 1744 aa20.05■□□□□ 0.8
ROM1-202ENST00000525801 SSFA2P28290 1259 aa20.04■□□□□ 0.8
ROM1-202ENST00000525801 ZNF530Q6P9A1 599 aaPredicted RBP20.04■□□□□ 0.8
ROM1-202ENST00000525801 MORC1Q86VD1 984 aa20.04■□□□□ 0.8
ROM1-202ENST00000525801 ATP10DQ9P241 1426 aa20.03■□□□□ 0.8
ROM1-202ENST00000525801 MMP10P09238 476 aa20.03■□□□□ 0.8
ROM1-202ENST00000525801 CNGB1Q14028 1251 aaPredicted RBP20.03■□□□□ 0.8
ROM1-202ENST00000525801 PLEKHO1Q53GL0 409 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms