RNA–Protein interactions for RNA: ENST00000525528.1

BDNF-212, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 BASIC

Gene BDNF, Length 4,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-212ENST00000525528 AIDAQ96BJ3 306 aa8.33□□□□□ -1.08
BDNF-212ENST00000525528 BIN2Q9UBW5 565 aaPredicted RBP8.33□□□□□ -1.08
BDNF-212ENST00000525528 RUFY1Q96T51 708 aa8.33□□□□□ -1.08
BDNF-212ENST00000525528 LNPKQ9C0E8 428 aa8.33□□□□□ -1.08
BDNF-212ENST00000525528 SIL1Q9H173 461 aa8.33□□□□□ -1.08
BDNF-212ENST00000525528 SEC63Q9UGP8 760 aaKnown RBP8.33□□□□□ -1.08
BDNF-212ENST00000525528 B4DLN1 442 aa8.33□□□□□ -1.08
BDNF-212ENST00000525528 MRPL12P52815 198 aaKnown RBP8.33□□□□□ -1.08
BDNF-212ENST00000525528 PPP1R42Q7Z4L9 355 aa8.33□□□□□ -1.08
BDNF-212ENST00000525528 CEBPAP49715 358 aaPredicted RBP8.32□□□□□ -1.08
BDNF-212ENST00000525528 TRAF1Q13077 416 aa8.32□□□□□ -1.08
BDNF-212ENST00000525528 CUX1P39880 1505 aa8.32□□□□□ -1.08
BDNF-212ENST00000525528 PPP1R12BO60237 982 aaPredicted RBP8.32□□□□□ -1.08
BDNF-212ENST00000525528 HLA-DOAP06340 250 aa8.32□□□□□ -1.08
BDNF-212ENST00000525528 MAP3K9P80192 1104 aa8.32□□□□□ -1.08
BDNF-212ENST00000525528 NUCB2P80303 420 aa8.32□□□□□ -1.08
BDNF-212ENST00000525528 STK32BQ9NY57 414 aa8.32□□□□□ -1.08
BDNF-212ENST00000525528 GNAT3A8MTJ3 354 aa8.32□□□□□ -1.08
BDNF-212ENST00000525528 IFIT5Q13325 482 aaKnown RBP8.32□□□□□ -1.08
BDNF-212ENST00000525528 ZRSR2Q15696 482 aaKnown RBP8.32□□□□□ -1.08
BDNF-212ENST00000525528 ANKRD18AQ8IVF6 992 aa8.32□□□□□ -1.08
BDNF-212ENST00000525528 ZNF444Q8N0Y2 327 aaPredicted RBP8.32□□□□□ -1.08
BDNF-212ENST00000525528 ZNF396Q96N95 335 aaPredicted RBP8.31□□□□□ -1.08
BDNF-212ENST00000525528 SLC12A5Q9H2X9 1139 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 CCDC7Q96M83 1385 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 CDC45O75419 566 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 BBXQ8WY36 941 aaPredicted RBP8.31□□□□□ -1.08
BDNF-212ENST00000525528 TIAM1Q13009 1591 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 KINO60870 393 aaKnown RBP8.31□□□□□ -1.08
BDNF-212ENST00000525528 RFX1P22670 979 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 STK38Q15208 465 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 NFKBIBQ15653 356 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 TXLNBQ8N3L3 684 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 SMARCE1Q969G3 411 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 CCDC85AQ96PX6 553 aaPredicted RBP8.31□□□□□ -1.08
BDNF-212ENST00000525528 ZNHIT6Q9NWK9 470 aaKnown RBP8.31□□□□□ -1.08
BDNF-212ENST00000525528 TFCP2L1Q9NZI6 479 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 CNTLNQ9NXG0 1405 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 BAG3O95817 575 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 SLC5A1P13866 664 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 MAP3K12Q12852 859 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 ANKRD1Q15327 319 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 DDB1Q16531 1140 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 CCDC96Q2M329 555 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 FMNL2Q96PY5 1086 aa8.31□□□□□ -1.08
BDNF-212ENST00000525528 CETN2P41208 172 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 BAG6P46379 1132 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 NBPF6Q5VWK0 638 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 NBPF5PQ86XG9 351 aaPredicted RBP8.3□□□□□ -1.08
BDNF-212ENST00000525528 STK11IPQ8N1F8 1099 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 WASF1Q92558 559 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 LRRC59Q96AG4 307 aaKnown RBP8.3□□□□□ -1.08
BDNF-212ENST00000525528 NBPF4Q96M43 638 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 KDM4AO75164 1064 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 IFNL2Q8IZJ0 200 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 MCM2P49736 904 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 SPTY2D1Q68D10 685 aaPredicted RBP8.3□□□□□ -1.08
BDNF-212ENST00000525528 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 WDR70Q9NW82 654 aa8.3□□□□□ -1.08
BDNF-212ENST00000525528 CASKIN1Q8WXD9 1431 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 ANKRD18BA2A2Z9 1011 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 NEFHP12036 1026 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 CA8P35219 290 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 LMTK3Q96Q04 1460 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 PPP4R3BQ5MIZ7 849 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 RAB34Q9BZG1 259 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 ACBD3Q9H3P7 528 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 SRGAP3O43295 1099 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 SMC2O95347 1197 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 CCDC181Q5TID7 509 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 IQCA1Q86XH1 822 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 SETQ01105 290 aaPredicted RBP8.29□□□□□ -1.08
BDNF-212ENST00000525528 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.29□□□□□ -1.08
BDNF-212ENST00000525528 TANGO6Q9C0B7 1094 aa8.29□□□□□ -1.08
BDNF-212ENST00000525528 EPRSP07814 1512 aaKnown RBP8.28□□□□□ -1.08
BDNF-212ENST00000525528 KIF7Q2M1P5 1343 aa8.28□□□□□ -1.08
BDNF-212ENST00000525528 ZNF771Q7L3S4 317 aaPredicted RBP8.28□□□□□ -1.08
BDNF-212ENST00000525528 CTCFLQ8NI51 663 aaPredicted RBP8.28□□□□□ -1.08
BDNF-212ENST00000525528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.28□□□□□ -1.08
BDNF-212ENST00000525528 CCDC196A0A1B0GTZ2 297 aa8.28□□□□□ -1.08
BDNF-212ENST00000525528 KRT32Q14532 448 aa8.28□□□□□ -1.08
BDNF-212ENST00000525528 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
BDNF-212ENST00000525528 SETDB2Q96T68 719 aa8.28□□□□□ -1.08
BDNF-212ENST00000525528 LRRCC1Q9C099 1032 aa8.28□□□□□ -1.08
BDNF-212ENST00000525528 FCHSD2O94868 740 aa8.28□□□□□ -1.08
BDNF-212ENST00000525528 PDE4AP27815 886 aa8.28□□□□□ -1.08
BDNF-212ENST00000525528 RRS1Q15050 365 aaKnown RBP8.28□□□□□ -1.08
BDNF-212ENST00000525528 AACSQ86V21 672 aa8.28□□□□□ -1.08
BDNF-212ENST00000525528 TROQ12816 1431 aaPredicted RBP8.28□□□□□ -1.08
BDNF-212ENST00000525528 RRP1P56182 461 aaKnown RBP8.27□□□□□ -1.08
BDNF-212ENST00000525528 IMMTQ16891 758 aaKnown RBP8.27□□□□□ -1.08
BDNF-212ENST00000525528 CCDC150Q8NCX0 1101 aa8.27□□□□□ -1.08
BDNF-212ENST00000525528 NLRP3Q96P20 1036 aa8.27□□□□□ -1.08
BDNF-212ENST00000525528 DACH1Q9UI36 760 aa8.27□□□□□ -1.08
BDNF-212ENST00000525528 ERLIN2O94905 339 aa8.27□□□□□ -1.09
BDNF-212ENST00000525528 EXOSC9Q06265 439 aaKnown RBP8.27□□□□□ -1.09
BDNF-212ENST00000525528 NAPBQ9H115 298 aa8.27□□□□□ -1.09
BDNF-212ENST00000525528 RNF41Q9H4P4 317 aaPredicted RBP8.27□□□□□ -1.09
BDNF-212ENST00000525528 CYP46A1Q9Y6A2 500 aa8.27□□□□□ -1.09
BDNF-212ENST00000525528 CFTRP13569 1480 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms