RNA–Protein interactions for RNA: ENST00000525523.1

AC055860.1-201, humanhuman

TSL 5 BASIC

Gene AC055860.1, Length 688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055860.1-201ENST00000525523 LY75O60449 1722 aa10.95□□□□□ -0.66
AC055860.1-201ENST00000525523 CPSF1Q10570 1443 aaKnown RBP10.95□□□□□ -0.66
AC055860.1-201ENST00000525523 ACEP12821 1306 aa10.95□□□□□ -0.66
AC055860.1-201ENST00000525523 NUDT16Q96DE0 195 aaKnown RBP10.95□□□□□ -0.66
AC055860.1-201ENST00000525523 TRAK1Q9UPV9 953 aa10.95□□□□□ -0.66
AC055860.1-201ENST00000525523 PNPLA7Q6ZV29 1317 aa10.94□□□□□ -0.66
AC055860.1-201ENST00000525523 KIF3CO14782 793 aa10.94□□□□□ -0.66
AC055860.1-201ENST00000525523 DNAJC5GQ8N7S2 189 aa10.94□□□□□ -0.66
AC055860.1-201ENST00000525523 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
AC055860.1-201ENST00000525523 USP6P35125 1406 aa10.93□□□□□ -0.66
AC055860.1-201ENST00000525523 CCDC7Q96M83 1385 aa10.93□□□□□ -0.66
AC055860.1-201ENST00000525523 PPIP5K1Q6PFW1 1433 aa10.92□□□□□ -0.66
AC055860.1-201ENST00000525523 ZBTB7CA1YPR0 619 aa10.92□□□□□ -0.66
AC055860.1-201ENST00000525523 EXOC5O00471 708 aa10.92□□□□□ -0.66
AC055860.1-201ENST00000525523 SLC27A3Q5K4L6 730 aa10.91□□□□□ -0.66
AC055860.1-201ENST00000525523 JMYQ8N9B5 988 aa10.91□□□□□ -0.66
AC055860.1-201ENST00000525523 CARD10Q9BWT7 1032 aa10.91□□□□□ -0.66
AC055860.1-201ENST00000525523 DOT1LQ8TEK3 1739 aa10.91□□□□□ -0.66
AC055860.1-201ENST00000525523 PLEKHG3A1L390 1219 aa10.9□□□□□ -0.66
AC055860.1-201ENST00000525523 TOMM70O94826 608 aa10.9□□□□□ -0.66
AC055860.1-201ENST00000525523 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
AC055860.1-201ENST00000525523 KLRG1Q96E93 195 aa10.9□□□□□ -0.66
AC055860.1-201ENST00000525523 ACSBG1Q96GR2 724 aa10.9□□□□□ -0.66
AC055860.1-201ENST00000525523 LRRC4BQ9NT99 713 aa10.9□□□□□ -0.66
AC055860.1-201ENST00000525523 PCDH10Q9P2E7 1040 aa10.9□□□□□ -0.66
AC055860.1-201ENST00000525523 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
AC055860.1-201ENST00000525523 C5P01031 1676 aa10.89□□□□□ -0.67
AC055860.1-201ENST00000525523 TFCP2L1Q9NZI6 479 aa10.89□□□□□ -0.67
AC055860.1-201ENST00000525523 PCNTO95613 3336 aa10.88□□□□□ -0.67
AC055860.1-201ENST00000525523 CSB-PGBD3P0DP91 1061 aa10.88□□□□□ -0.67
AC055860.1-201ENST00000525523 CD2APQ9Y5K6 639 aa10.88□□□□□ -0.67
AC055860.1-201ENST00000525523 CDK19Q9BWU1 502 aa10.87□□□□□ -0.67
AC055860.1-201ENST00000525523 USP54Q70EL1 1684 aa10.87□□□□□ -0.67
AC055860.1-201ENST00000525523 FAM208AQ9UK61 1670 aaKnown RBP10.87□□□□□ -0.67
AC055860.1-201ENST00000525523 TNRC6CQ9HCJ0 1690 aaKnown RBP10.86□□□□□ -0.67
AC055860.1-201ENST00000525523 LTN1O94822 1766 aa10.86□□□□□ -0.67
AC055860.1-201ENST00000525523 NFAT5O94916 1531 aa10.86□□□□□ -0.67
AC055860.1-201ENST00000525523 WWC3Q9ULE0 1092 aa10.86□□□□□ -0.67
AC055860.1-201ENST00000525523 PKD1L3Q7Z443 1732 aa10.86□□□□□ -0.67
AC055860.1-201ENST00000525523 TAF1LQ8IZX4 1826 aa10.86□□□□□ -0.67
AC055860.1-201ENST00000525523 KIAA1210Q9ULL0 1709 aa10.85□□□□□ -0.67
AC055860.1-201ENST00000525523 NLRP6P59044 892 aa10.85□□□□□ -0.67
AC055860.1-201ENST00000525523 AXIN2Q9Y2T1 843 aa10.85□□□□□ -0.67
AC055860.1-201ENST00000525523 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
AC055860.1-201ENST00000525523 IGSF1Q8N6C5 1336 aa10.84□□□□□ -0.67
AC055860.1-201ENST00000525523 KCNH5Q8NCM2 988 aa10.83□□□□□ -0.68
AC055860.1-201ENST00000525523 MPHOSPH9Q99550 1183 aa10.83□□□□□ -0.68
AC055860.1-201ENST00000525523 KIF13BQ9NQT8 1826 aa10.83□□□□□ -0.68
AC055860.1-201ENST00000525523 ARHGEF25Q86VW2 580 aa10.82□□□□□ -0.68
AC055860.1-201ENST00000525523 KIAA1551Q9HCM1 1747 aa10.81□□□□□ -0.68
AC055860.1-201ENST00000525523 IL2RBP14784 551 aa10.81□□□□□ -0.68
AC055860.1-201ENST00000525523 FSTL1Q12841 308 aa10.81□□□□□ -0.68
AC055860.1-201ENST00000525523 MSL1Q68DK7 614 aa10.81□□□□□ -0.68
AC055860.1-201ENST00000525523 C16orf71Q8IYS4 520 aaPredicted RBP10.81□□□□□ -0.68
AC055860.1-201ENST00000525523 C10orf71Q711Q0 1435 aa10.81□□□□□ -0.68
AC055860.1-201ENST00000525523 TOGARAM1Q9Y4F4 1720 aa10.81□□□□□ -0.68
AC055860.1-201ENST00000525523 PLEKHG2Q9H7P9 1386 aa10.8□□□□□ -0.68
AC055860.1-201ENST00000525523 BRCA1P38398 1863 aaKnown RBP10.8□□□□□ -0.68
AC055860.1-201ENST00000525523 UBR3Q6ZT12 1888 aa10.8□□□□□ -0.68
AC055860.1-201ENST00000525523 ERBB3P21860 1342 aa10.8□□□□□ -0.68
AC055860.1-201ENST00000525523 ANKRD36BQ8N2N9 1353 aa10.79□□□□□ -0.68
AC055860.1-201ENST00000525523 HSPA1AP0DMV8 641 aaKnown RBP10.79□□□□□ -0.68
AC055860.1-201ENST00000525523 HSPA1BP0DMV9 641 aaKnown RBP10.79□□□□□ -0.68
AC055860.1-201ENST00000525523 HTRA3P83110 453 aa10.79□□□□□ -0.68
AC055860.1-201ENST00000525523 COL23A1Q86Y22 540 aaPredicted RBP10.79□□□□□ -0.68
AC055860.1-201ENST00000525523 STAC3Q96MF2 364 aa10.79□□□□□ -0.68
AC055860.1-201ENST00000525523 ARFGEF1Q9Y6D6 1849 aa10.79□□□□□ -0.68
AC055860.1-201ENST00000525523 C4BP0C0L5 1744 aa10.78□□□□□ -0.68
AC055860.1-201ENST00000525523 MON2Q7Z3U7 1717 aa10.78□□□□□ -0.68
AC055860.1-201ENST00000525523 N4BP2Q86UW6 1770 aaPredicted RBP10.78□□□□□ -0.68
AC055860.1-201ENST00000525523 HMGB2P26583 209 aaKnown RBP10.78□□□□□ -0.68
AC055860.1-201ENST00000525523 MNX1P50219 401 aaPredicted RBP10.78□□□□□ -0.68
AC055860.1-201ENST00000525523 SRPK2P78362 688 aaKnown RBP10.78□□□□□ -0.68
AC055860.1-201ENST00000525523 FLAD1Q8NFF5 587 aa10.78□□□□□ -0.68
AC055860.1-201ENST00000525523 NMRK2Q9NPI5 230 aa10.78□□□□□ -0.68
AC055860.1-201ENST00000525523 CCNL1Q9UK58 526 aaPredicted RBP10.78□□□□□ -0.68
AC055860.1-201ENST00000525523 NSD2O96028 1365 aa10.77□□□□□ -0.68
AC055860.1-201ENST00000525523 NSD3Q9BZ95 1437 aa10.77□□□□□ -0.68
AC055860.1-201ENST00000525523 POTEIP0CG38 1075 aa10.77□□□□□ -0.69
AC055860.1-201ENST00000525523 CLCN6P51797 869 aa10.76□□□□□ -0.69
AC055860.1-201ENST00000525523 KCNQ4P56696 695 aa10.76□□□□□ -0.69
AC055860.1-201ENST00000525523 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
AC055860.1-201ENST00000525523 NLRP2Q9NX02 1062 aa10.76□□□□□ -0.69
AC055860.1-201ENST00000525523 PXDNLA1KZ92 1463 aa10.75□□□□□ -0.69
AC055860.1-201ENST00000525523 TRIM26Q12899 539 aaPredicted RBP10.75□□□□□ -0.69
AC055860.1-201ENST00000525523 SYTL4Q96C24 671 aaPredicted RBP10.75□□□□□ -0.69
AC055860.1-201ENST00000525523 TTC21AQ8NDW8 1320 aa10.75□□□□□ -0.69
AC055860.1-201ENST00000525523 USP47Q96K76 1375 aa10.75□□□□□ -0.69
AC055860.1-201ENST00000525523 SOX12O15370 315 aa10.74□□□□□ -0.69
AC055860.1-201ENST00000525523 DCAF11Q8TEB1 546 aa10.74□□□□□ -0.69
AC055860.1-201ENST00000525523 KCPQ6ZWJ8 1503 aa10.74□□□□□ -0.69
AC055860.1-201ENST00000525523 KDM2AQ9Y2K7 1162 aa10.73□□□□□ -0.69
AC055860.1-201ENST00000525523 KDM2BQ8NHM5 1336 aa10.73□□□□□ -0.69
AC055860.1-201ENST00000525523 SMC1BQ8NDV3 1235 aa10.72□□□□□ -0.69
AC055860.1-201ENST00000525523 CABP2Q9NPB3 220 aa10.72□□□□□ -0.69
AC055860.1-201ENST00000525523 CABP1Q9NZU7 370 aa10.72□□□□□ -0.69
AC055860.1-201ENST00000525523 TTC21BQ7Z4L5 1316 aa10.72□□□□□ -0.69
AC055860.1-201ENST00000525523 SBF1O95248 1867 aa10.71□□□□□ -0.69
AC055860.1-201ENST00000525523 PRIM1P49642 420 aaKnown RBP10.71□□□□□ -0.69
AC055860.1-201ENST00000525523 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms