RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ANP32CO43423 234 aa8.77□□□□□ -1.01
CD44-214ENST00000525211 NUBP1P53384 320 aa8.77□□□□□ -1.01
CD44-214ENST00000525211 ATRNO75882 1429 aa8.77□□□□□ -1.01
CD44-214ENST00000525211 RTL1A6NKG5 1358 aa8.76□□□□□ -1.01
CD44-214ENST00000525211 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
CD44-214ENST00000525211 QTRT2Q9H974 415 aaKnown RBP8.76□□□□□ -1.01
CD44-214ENST00000525211 USP35Q9P2H5 1018 aa8.76□□□□□ -1.01
CD44-214ENST00000525211 GLI3P10071 1580 aa8.76□□□□□ -1.01
CD44-214ENST00000525211 SPATA31A5Q5VU36 1347 aa8.76□□□□□ -1.01
CD44-214ENST00000525211 SPATA31A7Q8IWB4 1347 aa8.76□□□□□ -1.01
CD44-214ENST00000525211 WDR17Q8IZU2 1322 aa8.76□□□□□ -1.01
CD44-214ENST00000525211 FAM208AQ9UK61 1670 aaKnown RBP8.75□□□□□ -1.01
CD44-214ENST00000525211 BLMP54132 1417 aaPredicted RBP8.75□□□□□ -1.01
CD44-214ENST00000525211 HMOX1P09601 288 aa8.75□□□□□ -1.01
CD44-214ENST00000525211 EVA1CP58658 441 aa8.75□□□□□ -1.01
CD44-214ENST00000525211 VPS72Q15906 364 aa8.75□□□□□ -1.01
CD44-214ENST00000525211 NLRP2Q9NX02 1062 aa8.75□□□□□ -1.01
CD44-214ENST00000525211 SPATA31A1Q5TZJ5 1347 aa8.75□□□□□ -1.01
CD44-214ENST00000525211 RGPD1P0DJD0 1748 aa8.74□□□□□ -1.01
CD44-214ENST00000525211 NWD2Q9ULI1 1742 aa8.74□□□□□ -1.01
CD44-214ENST00000525211 NCAPD2Q15021 1401 aa8.74□□□□□ -1.01
CD44-214ENST00000525211 CSB-PGBD3P0DP91 1061 aa8.74□□□□□ -1.01
CD44-214ENST00000525211 TOM1L2Q6ZVM7 507 aa8.74□□□□□ -1.01
CD44-214ENST00000525211 IGSF1Q8N6C5 1336 aa8.74□□□□□ -1.01
CD44-214ENST00000525211 MEGF6O75095 1541 aa8.74□□□□□ -1.01
CD44-214ENST00000525211 ABCC6O95255 1503 aa8.74□□□□□ -1.01
CD44-214ENST00000525211 KIF24Q5T7B8 1368 aa8.73□□□□□ -1.01
CD44-214ENST00000525211 DISP2A7MBM2 1401 aa8.73□□□□□ -1.01
CD44-214ENST00000525211 CRB1P82279 1406 aa8.73□□□□□ -1.01
CD44-214ENST00000525211 DIAPH1O60610 1272 aaKnown RBP8.73□□□□□ -1.01
CD44-214ENST00000525211 FAM98CQ17RN3 349 aaKnown RBP8.73□□□□□ -1.01
CD44-214ENST00000525211 GJD4Q96KN9 370 aaPredicted RBP8.73□□□□□ -1.01
CD44-214ENST00000525211 CARD10Q9BWT7 1032 aa8.73□□□□□ -1.01
CD44-214ENST00000525211 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
CD44-214ENST00000525211 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.72□□□□□ -1.01
CD44-214ENST00000525211 U2SURPO15042 1029 aaKnown RBP8.72□□□□□ -1.01
CD44-214ENST00000525211 GSE1Q14687 1217 aa8.72□□□□□ -1.01
CD44-214ENST00000525211 FAM182BQ5T319 152 aa8.72□□□□□ -1.01
CD44-214ENST00000525211 SULT6B1Q6IMI4 303 aa8.72□□□□□ -1.01
CD44-214ENST00000525211 PNISRQ8TF01 805 aaKnown RBP8.72□□□□□ -1.01
CD44-214ENST00000525211 PHACTR3Q96KR7 559 aa8.72□□□□□ -1.01
CD44-214ENST00000525211 ADAMTS8Q9UP79 889 aa8.72□□□□□ -1.01
CD44-214ENST00000525211 DCAF8Q5TAQ9 597 aa8.71□□□□□ -1.02
CD44-214ENST00000525211 CCDC146Q8IYE0 955 aa8.71□□□□□ -1.02
CD44-214ENST00000525211 TCP11L2Q8N4U5 519 aa8.71□□□□□ -1.02
CD44-214ENST00000525211 RSPH6AQ9H0K4 717 aa8.71□□□□□ -1.02
CD44-214ENST00000525211 MRS2Q9HD23 443 aa8.71□□□□□ -1.02
CD44-214ENST00000525211 TRPC5Q9UL62 973 aaPredicted RBP8.71□□□□□ -1.02
CD44-214ENST00000525211 U2AF1L5P0DN76 240 aaPredicted RBP8.7□□□□□ -1.02
CD44-214ENST00000525211 U2AF1Q01081 240 aaKnown RBP eCLIP8.7□□□□□ -1.02
CD44-214ENST00000525211 ZNF772Q68DY9 489 aaPredicted RBP8.7□□□□□ -1.02
CD44-214ENST00000525211 PLEKHF1Q96S99 279 aa8.7□□□□□ -1.02
CD44-214ENST00000525211 RGS12O14924 1447 aa8.7□□□□□ -1.02
CD44-214ENST00000525211 ONECUT3O60422 494 aaPredicted RBP8.69□□□□□ -1.02
CD44-214ENST00000525211 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
CD44-214ENST00000525211 PTF1AQ7RTS3 328 aa8.69□□□□□ -1.02
CD44-214ENST00000525211 SEPT12Q8IYM1 358 aa8.69□□□□□ -1.02
CD44-214ENST00000525211 BBXQ8WY36 941 aaPredicted RBP8.69□□□□□ -1.02
CD44-214ENST00000525211 CFAP53Q96M91 514 aa8.69□□□□□ -1.02
CD44-214ENST00000525211 KDRP35968 1356 aa8.69□□□□□ -1.02
CD44-214ENST00000525211 THSD7AQ9UPZ6 1657 aa8.69□□□□□ -1.02
CD44-214ENST00000525211 CYP27B1O15528 508 aa8.68□□□□□ -1.02
CD44-214ENST00000525211 RXRBP28702 533 aa8.68□□□□□ -1.02
CD44-214ENST00000525211 RBM6P78332 1123 aaKnown RBP8.68□□□□□ -1.02
CD44-214ENST00000525211 BARGINQ6ZT62 677 aa8.68□□□□□ -1.02
CD44-214ENST00000525211 FAM9BQ8IZU0 186 aa8.68□□□□□ -1.02
CD44-214ENST00000525211 MARCH10Q8NA82 808 aaPredicted RBP8.68□□□□□ -1.02
CD44-214ENST00000525211 SHANK3Q9BYB0 1731 aa8.68□□□□□ -1.02
CD44-214ENST00000525211 WNK3Q9BYP7 1800 aa8.68□□□□□ -1.02
CD44-214ENST00000525211 OVOS2A0A0G2JMS6 1433 aa8.67□□□□□ -1.02
CD44-214ENST00000525211 CCER2I3L3R5 266 aa8.67□□□□□ -1.02
CD44-214ENST00000525211 LRRC37A3O60309 1634 aa8.67□□□□□ -1.02
CD44-214ENST00000525211 IL2RBP14784 551 aa8.67□□□□□ -1.02
CD44-214ENST00000525211 MTHFSDQ2M296 383 aaKnown RBP8.67□□□□□ -1.02
CD44-214ENST00000525211 BRWD3Q6RI45 1802 aa8.67□□□□□ -1.02
CD44-214ENST00000525211 RRP7AQ9Y3A4 280 aaKnown RBP8.67□□□□□ -1.02
CD44-214ENST00000525211 RASEFQ8IZ41 740 aa8.66□□□□□ -1.02
CD44-214ENST00000525211 RNF25Q96BH1 459 aaPredicted RBP8.66□□□□□ -1.02
CD44-214ENST00000525211 FAM212AQ96EL1 285 aa8.66□□□□□ -1.02
CD44-214ENST00000525211 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.66□□□□□ -1.02
CD44-214ENST00000525211 THRAP3Q9Y2W1 955 aaKnown RBP8.66□□□□□ -1.02
CD44-214ENST00000525211 TATP17735 454 aaPredicted RBP8.65□□□□□ -1.02
CD44-214ENST00000525211 DCTN1Q14203 1278 aa8.65□□□□□ -1.02
CD44-214ENST00000525211 CHADLQ6NUI6 762 aa8.65□□□□□ -1.02
CD44-214ENST00000525211 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.02
CD44-214ENST00000525211 DDX54Q8TDD1 881 aaKnown RBP8.65□□□□□ -1.02
CD44-214ENST00000525211 RAPGEF4Q8WZA2 1011 aa8.65□□□□□ -1.02
CD44-214ENST00000525211 LGR6Q9HBX8 967 aa8.65□□□□□ -1.02
CD44-214ENST00000525211 NUDCQ9Y266 331 aa8.65□□□□□ -1.02
CD44-214ENST00000525211 TNS2Q63HR2 1409 aa8.64□□□□□ -1.03
CD44-214ENST00000525211 PKD1L3Q7Z443 1732 aa8.64□□□□□ -1.03
CD44-214ENST00000525211 PARP4Q9UKK3 1724 aaKnown RBP8.64□□□□□ -1.03
CD44-214ENST00000525211 A0A0G2JS52 829 aa8.64□□□□□ -1.03
CD44-214ENST00000525211 APAF1O14727 1248 aa8.64□□□□□ -1.03
CD44-214ENST00000525211 FCHSD2O94868 740 aa8.64□□□□□ -1.03
CD44-214ENST00000525211 MYT1Q01538 1121 aa8.64□□□□□ -1.03
CD44-214ENST00000525211 WDR43Q15061 677 aaKnown RBP eCLIP8.64□□□□□ -1.03
CD44-214ENST00000525211 THUMPD2Q9BTF0 503 aaKnown RBP8.64□□□□□ -1.03
CD44-214ENST00000525211 KDM6AO15550 1401 aaPredicted RBP8.63□□□□□ -1.03
CD44-214ENST00000525211 EXOC5O00471 708 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms