RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 PCDH11XQ9BZA7 1347 aa23.8■■□□□ 1.4
TSPAN4-214ENST00000525201 PCDH11YQ9BZA8 1340 aa23.8■■□□□ 1.4
TSPAN4-214ENST00000525201 MAP2P11137 1827 aaKnown RBP23.79■■□□□ 1.4
TSPAN4-214ENST00000525201 KCNQ2O43526 872 aa23.78■■□□□ 1.4
TSPAN4-214ENST00000525201 TXNRD1Q16881 649 aa23.78■■□□□ 1.4
TSPAN4-214ENST00000525201 PTF1AQ7RTS3 328 aa23.78■■□□□ 1.4
TSPAN4-214ENST00000525201 USHBP1Q8N6Y0 703 aa23.78■■□□□ 1.4
TSPAN4-214ENST00000525201 POLKQ9UBT6 870 aa23.78■■□□□ 1.4
TSPAN4-214ENST00000525201 KIF7Q2M1P5 1343 aa23.78■■□□□ 1.4
TSPAN4-214ENST00000525201 BTAF1O14981 1849 aa23.77■■□□□ 1.4
TSPAN4-214ENST00000525201 PLEKHG2Q9H7P9 1386 aa23.77■■□□□ 1.4
TSPAN4-214ENST00000525201 NCAPD2Q15021 1401 aa23.76■■□□□ 1.39
TSPAN4-214ENST00000525201 MORC1Q86VD1 984 aa23.76■■□□□ 1.39
TSPAN4-214ENST00000525201 SHANK3Q9BYB0 1731 aa23.76■■□□□ 1.39
TSPAN4-214ENST00000525201 TNNT2P45379 298 aaPredicted RBP23.75■■□□□ 1.39
TSPAN4-214ENST00000525201 STK32BQ9NY57 414 aa23.75■■□□□ 1.39
TSPAN4-214ENST00000525201 DOT1LQ8TEK3 1739 aa23.75■■□□□ 1.39
TSPAN4-214ENST00000525201 SYTL4Q96C24 671 aaPredicted RBP23.74■■□□□ 1.39
TSPAN4-214ENST00000525201 HMGB2P26583 209 aaKnown RBP23.73■■□□□ 1.39
TSPAN4-214ENST00000525201 SPG7Q9UQ90 795 aa23.73■■□□□ 1.39
TSPAN4-214ENST00000525201 SLC27A3Q5K4L6 730 aa23.72■■□□□ 1.39
TSPAN4-214ENST00000525201 PKD1L3Q7Z443 1732 aa23.71■■□□□ 1.39
TSPAN4-214ENST00000525201 PROM2Q8N271 834 aa23.71■■□□□ 1.39
TSPAN4-214ENST00000525201 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.7■■□□□ 1.38
TSPAN4-214ENST00000525201 PRIM1P49642 420 aaKnown RBP23.69■■□□□ 1.38
TSPAN4-214ENST00000525201 EYA1Q99502 592 aa23.69■■□□□ 1.38
TSPAN4-214ENST00000525201 SPON1Q9HCB6 807 aa23.69■■□□□ 1.38
TSPAN4-214ENST00000525201 ANO8Q9HCE9 1232 aaPredicted RBP23.69■■□□□ 1.38
TSPAN4-214ENST00000525201 EIF4A2Q14240 407 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-214ENST00000525201 SLC15A2Q16348 729 aa23.67■■□□□ 1.38
TSPAN4-214ENST00000525201 KAT6BQ8WYB5 2073 aa23.66■■□□□ 1.38
TSPAN4-214ENST00000525201 AMER1Q5JTC6 1135 aaPredicted RBP23.65■■□□□ 1.38
TSPAN4-214ENST00000525201 PAPPAQ13219 1627 aa23.65■■□□□ 1.38
TSPAN4-214ENST00000525201 IGSF1Q8N6C5 1336 aa23.64■■□□□ 1.38
TSPAN4-214ENST00000525201 PPP1R1BQ9UD71 204 aaPredicted RBP23.64■■□□□ 1.37
TSPAN4-214ENST00000525201 CASZ1Q86V15 1759 aa23.64■■□□□ 1.37
TSPAN4-214ENST00000525201 CYP27B1O15528 508 aa23.62■■□□□ 1.37
TSPAN4-214ENST00000525201 NPC1L1Q9UHC9 1359 aa23.62■■□□□ 1.37
TSPAN4-214ENST00000525201 IFNL2Q8IZJ0 200 aa23.61■■□□□ 1.37
TSPAN4-214ENST00000525201 LY75O60449 1722 aa23.61■■□□□ 1.37
TSPAN4-214ENST00000525201 NKX1-1Q15270 411 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-214ENST00000525201 SMARCC1Q92922 1105 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-214ENST00000525201 HSP90AB1P08238 724 aaKnown RBP23.58■■□□□ 1.37
TSPAN4-214ENST00000525201 AMOTQ4VCS5 1084 aa23.58■■□□□ 1.37
TSPAN4-214ENST00000525201 CCNL1Q9UK58 526 aaPredicted RBP23.58■■□□□ 1.37
TSPAN4-214ENST00000525201 PER1O15534 1290 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-214ENST00000525201 PLEKHO1Q53GL0 409 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-214ENST00000525201 MTFR1LQ9H019 292 aa23.57■■□□□ 1.36
TSPAN4-214ENST00000525201 LRRC4BQ9NT99 713 aa23.57■■□□□ 1.36
TSPAN4-214ENST00000525201 QSER1Q2KHR3 1735 aa23.56■■□□□ 1.36
TSPAN4-214ENST00000525201 MPRIPQ6WCQ1 1025 aa23.56■■□□□ 1.36
TSPAN4-214ENST00000525201 PALLDQ8WX93 1383 aa23.55■■□□□ 1.36
TSPAN4-214ENST00000525201 PHKG2P15735 406 aa23.55■■□□□ 1.36
TSPAN4-214ENST00000525201 TOGARAM1Q9Y4F4 1720 aa23.55■■□□□ 1.36
TSPAN4-214ENST00000525201 CC2D1BQ5T0F9 858 aaKnown RBP23.54■■□□□ 1.36
TSPAN4-214ENST00000525201 TMOD3Q9NYL9 352 aa23.54■■□□□ 1.36
TSPAN4-214ENST00000525201 ZBTB7AO95365 584 aa23.53■■□□□ 1.36
TSPAN4-214ENST00000525201 SLC16A10Q8TF71 515 aa23.53■■□□□ 1.36
TSPAN4-214ENST00000525201 AKT1S1Q96B36 256 aa23.53■■□□□ 1.36
TSPAN4-214ENST00000525201 TFCP2L1Q9NZI6 479 aa23.53■■□□□ 1.36
TSPAN4-214ENST00000525201 MTHFSP49914 203 aa23.52■■□□□ 1.36
TSPAN4-214ENST00000525201 ZNF827Q17R98 1081 aa23.52■■□□□ 1.36
TSPAN4-214ENST00000525201 ITGB4P16144 1822 aa23.52■■□□□ 1.36
TSPAN4-214ENST00000525201 KDRP35968 1356 aa23.52■■□□□ 1.36
TSPAN4-214ENST00000525201 C1orf141Q5JVX7 400 aa23.51■■□□□ 1.35
TSPAN4-214ENST00000525201 DCAF8L1A6NGE4 600 aa23.5■■□□□ 1.35
TSPAN4-214ENST00000525201 IL13P35225 146 aa23.5■■□□□ 1.35
TSPAN4-214ENST00000525201 SULT6B1Q6IMI4 303 aa23.5■■□□□ 1.35
TSPAN4-214ENST00000525201 DCAF5Q96JK2 942 aa23.5■■□□□ 1.35
TSPAN4-214ENST00000525201 C5P01031 1676 aa23.49■■□□□ 1.35
TSPAN4-214ENST00000525201 ZNF530Q6P9A1 599 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-214ENST00000525201 ERVV-2B6SEH9 535 aa23.48■■□□□ 1.35
TSPAN4-214ENST00000525201 PIGBQ92521 554 aa23.48■■□□□ 1.35
TSPAN4-214ENST00000525201 DIAPH1O60610 1272 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-214ENST00000525201 FLAD1Q8NFF5 587 aa23.47■■□□□ 1.35
TSPAN4-214ENST00000525201 PDGFDQ9GZP0 370 aaPredicted RBP23.47■■□□□ 1.35
TSPAN4-214ENST00000525201 ATF5Q9Y2D1 282 aaPredicted RBP23.46■■□□□ 1.35
TSPAN4-214ENST00000525201 PNPLA7Q6ZV29 1317 aa23.45■■□□□ 1.34
TSPAN4-214ENST00000525201 AEBP1Q8IUX7 1158 aa23.45■■□□□ 1.34
TSPAN4-214ENST00000525201 POLD1P28340 1107 aa23.44■■□□□ 1.34
TSPAN4-214ENST00000525201 PTGER2P43116 358 aa23.44■■□□□ 1.34
TSPAN4-214ENST00000525201 KCNQ4P56696 695 aa23.44■■□□□ 1.34
TSPAN4-214ENST00000525201 CFAP53Q96M91 514 aa23.44■■□□□ 1.34
TSPAN4-214ENST00000525201 AK7Q96M32 723 aa23.42■■□□□ 1.34
TSPAN4-214ENST00000525201 TAF1LQ8IZX4 1826 aa23.41■■□□□ 1.34
TSPAN4-214ENST00000525201 TUBGCP6Q96RT7 1819 aa23.41■■□□□ 1.34
TSPAN4-214ENST00000525201 LOC102724428A0A0B4J2F2 783 aa23.41■■□□□ 1.34
TSPAN4-214ENST00000525201 SIK1P57059 783 aa23.41■■□□□ 1.34
TSPAN4-214ENST00000525201 CABP4P57796 275 aa23.41■■□□□ 1.34
TSPAN4-214ENST00000525201 C4BP0C0L5 1744 aa23.41■■□□□ 1.34
TSPAN4-214ENST00000525201 MSH5O43196 834 aa23.4■■□□□ 1.34
TSPAN4-214ENST00000525201 ARXQ96QS3 562 aa23.4■■□□□ 1.34
TSPAN4-214ENST00000525201 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.33
TSPAN4-214ENST00000525201 AKAP4Q5JQC9 854 aa23.39■■□□□ 1.33
TSPAN4-214ENST00000525201 SGIP1Q9BQI5 828 aa23.39■■□□□ 1.33
TSPAN4-214ENST00000525201 KDM6AO15550 1401 aaPredicted RBP23.39■■□□□ 1.33
TSPAN4-214ENST00000525201 ASAP1Q9ULH1 1129 aa23.38■■□□□ 1.33
TSPAN4-214ENST00000525201 MAP3K5Q99683 1374 aa23.38■■□□□ 1.33
TSPAN4-214ENST00000525201 ZNF831Q5JPB2 1677 aa23.38■■□□□ 1.33
TSPAN4-214ENST00000525201 COL3A1P02461 1466 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms