RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 SF3B2Q13435 895 aaKnown RBP12.21□□□□□ -0.45
DEPDC1-205ENST00000525124 LMO7Q8WWI1 1683 aa12.21□□□□□ -0.45
DEPDC1-205ENST00000525124 QRICH2Q9H0J4 1663 aa12.2□□□□□ -0.46
DEPDC1-205ENST00000525124 PPP1R37O75864 691 aa12.2□□□□□ -0.46
DEPDC1-205ENST00000525124 BTG4Q9NY30 223 aa12.2□□□□□ -0.46
DEPDC1-205ENST00000525124 NRKQ7Z2Y5 1582 aa12.2□□□□□ -0.46
DEPDC1-205ENST00000525124 DISP2A7MBM2 1401 aa12.2□□□□□ -0.46
DEPDC1-205ENST00000525124 SPATA31A5Q5VU36 1347 aa12.19□□□□□ -0.46
DEPDC1-205ENST00000525124 SPATA31A7Q8IWB4 1347 aa12.19□□□□□ -0.46
DEPDC1-205ENST00000525124 SLC34A2O95436 690 aa12.19□□□□□ -0.46
DEPDC1-205ENST00000525124 NGDNQ8NEJ9 315 aaKnown RBP12.19□□□□□ -0.46
DEPDC1-205ENST00000525124 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
DEPDC1-205ENST00000525124 CCDC9Q9Y3X0 531 aaKnown RBP12.19□□□□□ -0.46
DEPDC1-205ENST00000525124 PARP4Q9UKK3 1724 aaKnown RBP12.18□□□□□ -0.46
DEPDC1-205ENST00000525124 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
DEPDC1-205ENST00000525124 RREB1Q92766 1687 aa12.18□□□□□ -0.46
DEPDC1-205ENST00000525124 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1-205ENST00000525124 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
DEPDC1-205ENST00000525124 PTGER2P43116 358 aa12.17□□□□□ -0.46
DEPDC1-205ENST00000525124 BAG6P46379 1132 aa12.17□□□□□ -0.46
DEPDC1-205ENST00000525124 LSM11P83369 360 aaKnown RBP eCLIP12.17□□□□□ -0.46
DEPDC1-205ENST00000525124 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
DEPDC1-205ENST00000525124 DEFB132Q7Z7B7 95 aa12.17□□□□□ -0.46
DEPDC1-205ENST00000525124 LHX6Q9UPM6 363 aa12.17□□□□□ -0.46
DEPDC1-205ENST00000525124 WNK3Q9BYP7 1800 aa12.16□□□□□ -0.46
DEPDC1-205ENST00000525124 TRPM1Q7Z4N2 1603 aa12.16□□□□□ -0.46
DEPDC1-205ENST00000525124 AKAP12Q02952 1782 aa12.16□□□□□ -0.46
DEPDC1-205ENST00000525124 FAM98CQ17RN3 349 aaKnown RBP12.16□□□□□ -0.46
DEPDC1-205ENST00000525124 CDK19Q9BWU1 502 aa12.16□□□□□ -0.46
DEPDC1-205ENST00000525124 SBF2Q86WG5 1849 aa12.16□□□□□ -0.46
DEPDC1-205ENST00000525124 TMC2Q8TDI7 906 aa12.15□□□□□ -0.46
DEPDC1-205ENST00000525124 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
DEPDC1-205ENST00000525124 CPDO75976 1380 aa12.15□□□□□ -0.46
DEPDC1-205ENST00000525124 KIAA0232Q92628 1395 aa12.15□□□□□ -0.46
DEPDC1-205ENST00000525124 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.46
DEPDC1-205ENST00000525124 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.46
DEPDC1-205ENST00000525124 ACEP12821 1306 aa12.14□□□□□ -0.47
DEPDC1-205ENST00000525124 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
DEPDC1-205ENST00000525124 NBPF8Q3BBV2 869 aa12.14□□□□□ -0.47
DEPDC1-205ENST00000525124 USP19O94966 1318 aa12.13□□□□□ -0.47
DEPDC1-205ENST00000525124 CAMTA1Q9Y6Y1 1673 aa12.13□□□□□ -0.47
DEPDC1-205ENST00000525124 COL18A1P39060 1754 aa12.13□□□□□ -0.47
DEPDC1-205ENST00000525124 NUP188Q5SRE5 1749 aa12.13□□□□□ -0.47
DEPDC1-205ENST00000525124 SSH2Q76I76 1423 aa12.12□□□□□ -0.47
DEPDC1-205ENST00000525124 A0A0G2JS52 829 aa12.12□□□□□ -0.47
DEPDC1-205ENST00000525124 MYT1Q01538 1121 aa12.12□□□□□ -0.47
DEPDC1-205ENST00000525124 BARGINQ6ZT62 677 aa12.12□□□□□ -0.47
DEPDC1-205ENST00000525124 SLIT3O75094 1523 aa12.11□□□□□ -0.47
DEPDC1-205ENST00000525124 RGPD5Q99666 1765 aa12.11□□□□□ -0.47
DEPDC1-205ENST00000525124 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
DEPDC1-205ENST00000525124 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
DEPDC1-205ENST00000525124 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
DEPDC1-205ENST00000525124 PEAK1Q9H792 1746 aa12.11□□□□□ -0.47
DEPDC1-205ENST00000525124 PPIP5K1Q6PFW1 1433 aa12.11□□□□□ -0.47
DEPDC1-205ENST00000525124 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
DEPDC1-205ENST00000525124 NBPF1Q3BBV0 1214 aa12.1□□□□□ -0.47
DEPDC1-205ENST00000525124 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
DEPDC1-205ENST00000525124 THRAP3Q9Y2W1 955 aaKnown RBP12.1□□□□□ -0.47
DEPDC1-205ENST00000525124 USP54Q70EL1 1684 aa12.1□□□□□ -0.47
DEPDC1-205ENST00000525124 PBX2P40425 430 aa12.09□□□□□ -0.47
DEPDC1-205ENST00000525124 CHRNA2Q15822 529 aa12.09□□□□□ -0.47
DEPDC1-205ENST00000525124 NLRP13Q86W25 1043 aa12.09□□□□□ -0.47
DEPDC1-205ENST00000525124 ABTB2Q8N961 1025 aa12.09□□□□□ -0.47
DEPDC1-205ENST00000525124 MON2Q7Z3U7 1717 aa12.08□□□□□ -0.47
DEPDC1-205ENST00000525124 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.47
DEPDC1-205ENST00000525124 ZC3H6P61129 1189 aaKnown RBP12.08□□□□□ -0.48
DEPDC1-205ENST00000525124 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
DEPDC1-205ENST00000525124 USP6P35125 1406 aa12.08□□□□□ -0.48
DEPDC1-205ENST00000525124 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
DEPDC1-205ENST00000525124 C11orf95C9JLR9 678 aaPredicted RBP12.07□□□□□ -0.48
DEPDC1-205ENST00000525124 CRB1P82279 1406 aa12.06□□□□□ -0.48
DEPDC1-205ENST00000525124 GCP02774 474 aa12.06□□□□□ -0.48
DEPDC1-205ENST00000525124 SRPK2P78362 688 aaKnown RBP12.06□□□□□ -0.48
DEPDC1-205ENST00000525124 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
DEPDC1-205ENST00000525124 STRN4Q9NRL3 753 aa12.06□□□□□ -0.48
DEPDC1-205ENST00000525124 ABCC6O95255 1503 aa12.06□□□□□ -0.48
DEPDC1-205ENST00000525124 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
DEPDC1-205ENST00000525124 EVA1CP58658 441 aa12.05□□□□□ -0.48
DEPDC1-205ENST00000525124 FAM182BQ5T319 152 aa12.05□□□□□ -0.48
DEPDC1-205ENST00000525124 NUTM2GQ5VZR2 741 aa12.05□□□□□ -0.48
DEPDC1-205ENST00000525124 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
DEPDC1-205ENST00000525124 EZH2Q15910 746 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-205ENST00000525124 LARP1Q6PKG0 1096 aaKnown RBP12.04□□□□□ -0.48
DEPDC1-205ENST00000525124 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1-205ENST00000525124 TRIM37O94972 964 aa12.03□□□□□ -0.48
DEPDC1-205ENST00000525124 PDE3BQ13370 1112 aa12.03□□□□□ -0.48
DEPDC1-205ENST00000525124 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
DEPDC1-205ENST00000525124 EVC2Q86UK5 1308 aa12.03□□□□□ -0.48
DEPDC1-205ENST00000525124 LTN1O94822 1766 aa12.02□□□□□ -0.48
DEPDC1-205ENST00000525124 FOXK1P85037 733 aa12.02□□□□□ -0.49
DEPDC1-205ENST00000525124 L3MBTL2Q969R5 705 aa12.02□□□□□ -0.49
DEPDC1-205ENST00000525124 CABP1Q9NZU7 370 aa12.02□□□□□ -0.49
DEPDC1-205ENST00000525124 SBNO2Q9Y2G9 1366 aa12.02□□□□□ -0.49
DEPDC1-205ENST00000525124 OVOS2A0A0G2JMS6 1433 aa12.02□□□□□ -0.49
DEPDC1-205ENST00000525124 OVOS2A0A0J9YW53 1432 aa12.02□□□□□ -0.49
DEPDC1-205ENST00000525124 BCL9O00512 1426 aa12.02□□□□□ -0.49
DEPDC1-205ENST00000525124 OVOS2Q6IE36 1432 aa12.02□□□□□ -0.49
DEPDC1-205ENST00000525124 APBA3O96018 575 aa12.01□□□□□ -0.49
DEPDC1-205ENST00000525124 R3HDM1Q15032 1099 aaKnown RBP12.01□□□□□ -0.49
DEPDC1-205ENST00000525124 USP35Q9P2H5 1018 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms