RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 ANP32AP39687 249 aaKnown RBP9.52□□□□□ -0.89
CASP4-204ENST00000524843 PANK1Q8TE04 598 aa9.52□□□□□ -0.89
CASP4-204ENST00000524843 SSH1Q8WYL5 1049 aa9.52□□□□□ -0.89
CASP4-204ENST00000524843 FRAT1Q92837 279 aaPredicted RBP9.52□□□□□ -0.89
CASP4-204ENST00000524843 PHACTR3Q96KR7 559 aa9.52□□□□□ -0.89
CASP4-204ENST00000524843 COG6Q9Y2V7 657 aa9.52□□□□□ -0.89
CASP4-204ENST00000524843 USP19O94966 1318 aa9.52□□□□□ -0.89
CASP4-204ENST00000524843 CACNA1FO60840 1977 aa9.52□□□□□ -0.89
CASP4-204ENST00000524843 FBLN1P23142 703 aa9.51□□□□□ -0.89
CASP4-204ENST00000524843 HOXC9P31274 260 aa9.51□□□□□ -0.89
CASP4-204ENST00000524843 HSP90AB2PQ58FF8 381 aa9.51□□□□□ -0.89
CASP4-204ENST00000524843 ABTB2Q8N961 1025 aa9.51□□□□□ -0.89
CASP4-204ENST00000524843 LMO7Q8WWI1 1683 aa9.51□□□□□ -0.89
CASP4-204ENST00000524843 N4BP2Q86UW6 1770 aaPredicted RBP9.5□□□□□ -0.89
CASP4-204ENST00000524843 TRIM27P14373 513 aa9.5□□□□□ -0.89
CASP4-204ENST00000524843 C14orf37Q86TY3 774 aa9.5□□□□□ -0.89
CASP4-204ENST00000524843 RWDD1Q9H446 243 aaPredicted RBP9.5□□□□□ -0.89
CASP4-204ENST00000524843 MBIPQ9NS73 344 aa9.5□□□□□ -0.89
CASP4-204ENST00000524843 BABAM1Q9NWV8 329 aa9.5□□□□□ -0.89
CASP4-204ENST00000524843 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
CASP4-204ENST00000524843 CRB1P82279 1406 aa9.49□□□□□ -0.89
CASP4-204ENST00000524843 TWISTNBQ3B726 338 aaPredicted RBP9.49□□□□□ -0.89
CASP4-204ENST00000524843 PROSER2Q86WR7 435 aaPredicted RBP9.49□□□□□ -0.89
CASP4-204ENST00000524843 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
CASP4-204ENST00000524843 RTF1Q92541 710 aaKnown RBP9.49□□□□□ -0.89
CASP4-204ENST00000524843 BCL2L13Q9BXK5 485 aa9.49□□□□□ -0.89
CASP4-204ENST00000524843 BACH2Q9BYV9 841 aa9.49□□□□□ -0.89
CASP4-204ENST00000524843 API5Q9BZZ5 524 aaKnown RBP9.49□□□□□ -0.89
CASP4-204ENST00000524843 C19orf44Q9H6X5 657 aa9.49□□□□□ -0.89
CASP4-204ENST00000524843 MAP3K5Q99683 1374 aa9.49□□□□□ -0.89
CASP4-204ENST00000524843 VAMP4O75379 141 aa9.48□□□□□ -0.89
CASP4-204ENST00000524843 RLBP1P12271 317 aa9.48□□□□□ -0.89
CASP4-204ENST00000524843 PSME1Q06323 249 aa9.48□□□□□ -0.89
CASP4-204ENST00000524843 HDAC1Q13547 482 aaPredicted RBP9.48□□□□□ -0.89
CASP4-204ENST00000524843 ESCO1Q5FWF5 840 aa9.48□□□□□ -0.89
CASP4-204ENST00000524843 IP6K1Q92551 441 aa9.48□□□□□ -0.89
CASP4-204ENST00000524843 ABCC4O15439 1325 aa9.48□□□□□ -0.89
CASP4-204ENST00000524843 CRYBG1Q9Y4K1 1723 aa9.48□□□□□ -0.89
CASP4-204ENST00000524843 CHL1O00533 1208 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 PAK3O75914 559 aaPredicted RBP9.47□□□□□ -0.89
CASP4-204ENST00000524843 PDE4AP27815 886 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 FAM161AQ3B820 660 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 ITPRIPQ8IWB1 547 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 MRPL50Q8N5N7 158 aaKnown RBP9.47□□□□□ -0.89
CASP4-204ENST00000524843 EYA1Q99502 592 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 CHMP4AQ9BY43 222 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 PTPRCP08575 1304 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 MSH6P52701 1360 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 TMEM94Q12767 1356 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 KDM3BQ7LBC6 1761 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 TNS3Q68CZ2 1445 aa9.47□□□□□ -0.89
CASP4-204ENST00000524843 CADPS2Q86UW7 1296 aa9.46□□□□□ -0.9
CASP4-204ENST00000524843 NOB1Q9ULX3 412 aaKnown RBP9.46□□□□□ -0.9
CASP4-204ENST00000524843 LAS1LQ9Y4W2 734 aaKnown RBP9.46□□□□□ -0.9
CASP4-204ENST00000524843 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
CASP4-204ENST00000524843 ADAMTS7Q9UKP4 1686 aa9.45□□□□□ -0.9
CASP4-204ENST00000524843 XIRP1Q702N8 1843 aaKnown RBP9.45□□□□□ -0.9
CASP4-204ENST00000524843 SOX12O15370 315 aa9.45□□□□□ -0.9
CASP4-204ENST00000524843 ATF3P18847 181 aa9.45□□□□□ -0.9
CASP4-204ENST00000524843 MYT1Q01538 1121 aa9.45□□□□□ -0.9
CASP4-204ENST00000524843 THUMPD2Q9BTF0 503 aaKnown RBP9.45□□□□□ -0.9
CASP4-204ENST00000524843 NPHP3Q7Z494 1330 aa9.45□□□□□ -0.9
CASP4-204ENST00000524843 GNAT3A8MTJ3 354 aa9.44□□□□□ -0.9
CASP4-204ENST00000524843 MTHFSDQ2M296 383 aaKnown RBP9.44□□□□□ -0.9
CASP4-204ENST00000524843 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
CASP4-204ENST00000524843 TMEM57Q8N5G2 664 aa9.44□□□□□ -0.9
CASP4-204ENST00000524843 SPDYE1Q8NFV5 336 aaPredicted RBP9.44□□□□□ -0.9
CASP4-204ENST00000524843 DDRGK1Q96HY6 314 aa9.44□□□□□ -0.9
CASP4-204ENST00000524843 ZBTB40Q9NUA8 1239 aa9.44□□□□□ -0.9
CASP4-204ENST00000524843 PXDNQ92626 1479 aa9.44□□□□□ -0.9
CASP4-204ENST00000524843 STRCQ7RTU9 1775 aa9.44□□□□□ -0.9
CASP4-204ENST00000524843 CEMIPQ8WUJ3 1361 aa9.43□□□□□ -0.9
CASP4-204ENST00000524843 FAM83GA6ND36 823 aa9.43□□□□□ -0.9
CASP4-204ENST00000524843 IGHDP01880 384 aa9.43□□□□□ -0.9
CASP4-204ENST00000524843 AMOTQ4VCS5 1084 aa9.43□□□□□ -0.9
CASP4-204ENST00000524843 ARHGEF25Q86VW2 580 aa9.43□□□□□ -0.9
CASP4-204ENST00000524843 TSPYL4Q9UJ04 414 aa9.43□□□□□ -0.9
CASP4-204ENST00000524843 PCDHB15Q9Y5E8 787 aa9.43□□□□□ -0.9
CASP4-204ENST00000524843 RGPD2P0DJD1 1756 aa9.42□□□□□ -0.9
CASP4-204ENST00000524843 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
CASP4-204ENST00000524843 RGS12O14924 1447 aa9.42□□□□□ -0.9
CASP4-204ENST00000524843 HOXB7P09629 217 aa9.42□□□□□ -0.9
CASP4-204ENST00000524843 KRT28Q7Z3Y7 464 aa9.42□□□□□ -0.9
CASP4-204ENST00000524843 SMC5Q8IY18 1101 aa9.42□□□□□ -0.9
CASP4-204ENST00000524843 C8orf58Q8NAV2 365 aa9.42□□□□□ -0.9
CASP4-204ENST00000524843 IPO9Q96P70 1041 aaKnown RBP9.42□□□□□ -0.9
CASP4-204ENST00000524843 TNNQ9UQP3 1299 aa9.42□□□□□ -0.9
CASP4-204ENST00000524843 SIPA1L3O60292 1781 aaPredicted RBP9.42□□□□□ -0.9
CASP4-204ENST00000524843 COL18A1P39060 1754 aa9.42□□□□□ -0.9
CASP4-204ENST00000524843 CPDO75976 1380 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 GCP02774 474 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 RGS3P49796 1198 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 C8orf34Q49A92 452 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 NUTM2GQ5VZR2 741 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 MCM10Q7L590 875 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 TSPYL6Q8N831 410 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 GCC1Q96CN9 775 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 ORAI2Q96SN7 254 aa9.41□□□□□ -0.9
CASP4-204ENST00000524843 PKD1L3Q7Z443 1732 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms