RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 GOLGA6L6A8MZA4 724 aa11.72□□□□□ -0.53
KDM2A-204ENST00000524657 MX1P20591 662 aa11.72□□□□□ -0.53
KDM2A-204ENST00000524657 PRKAR2BP31323 418 aa11.72□□□□□ -0.53
KDM2A-204ENST00000524657 MRPL50Q8N5N7 158 aaKnown RBP11.72□□□□□ -0.53
KDM2A-204ENST00000524657 ABCC11Q96J66 1382 aa11.72□□□□□ -0.53
KDM2A-204ENST00000524657 CDC42BPAQ5VT25 1732 aa11.72□□□□□ -0.53
KDM2A-204ENST00000524657 VAMP4O75379 141 aa11.72□□□□□ -0.53
KDM2A-204ENST00000524657 PLEKHF1Q96S99 279 aa11.72□□□□□ -0.53
KDM2A-204ENST00000524657 TERF2Q15554 542 aa11.71□□□□□ -0.53
KDM2A-204ENST00000524657 ALDH1L2Q3SY69 923 aa11.71□□□□□ -0.53
KDM2A-204ENST00000524657 LUZP1Q86V48 1076 aa11.71□□□□□ -0.53
KDM2A-204ENST00000524657 RSPH4AQ5TD94 716 aa11.71□□□□□ -0.53
KDM2A-204ENST00000524657 CKAP2LQ8IYA6 745 aa11.71□□□□□ -0.53
KDM2A-204ENST00000524657 TRIM5Q9C035 493 aa11.71□□□□□ -0.53
KDM2A-204ENST00000524657 MYO5CQ9NQX4 1742 aa11.71□□□□□ -0.54
KDM2A-204ENST00000524657 SYNJ2O15056 1496 aa11.71□□□□□ -0.54
KDM2A-204ENST00000524657 DCTPP1Q9H773 170 aa11.71□□□□□ -0.54
KDM2A-204ENST00000524657 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.54
KDM2A-204ENST00000524657 GABPB1Q06547 395 aaPredicted RBP11.7□□□□□ -0.54
KDM2A-204ENST00000524657 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
KDM2A-204ENST00000524657 KRT222Q8N1A0 295 aa11.7□□□□□ -0.54
KDM2A-204ENST00000524657 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
KDM2A-204ENST00000524657 DIAPH1O60610 1272 aaKnown RBP11.7□□□□□ -0.54
KDM2A-204ENST00000524657 DCTN1Q14203 1278 aa11.7□□□□□ -0.54
KDM2A-204ENST00000524657 SLC4A10Q6U841 1118 aa11.7□□□□□ -0.54
KDM2A-204ENST00000524657 STK26Q9P289 416 aa11.7□□□□□ -0.54
KDM2A-204ENST00000524657 WDR33Q9C0J8 1336 aaKnown RBP11.7□□□□□ -0.54
KDM2A-204ENST00000524657 ZNF518AQ6AHZ1 1483 aa11.7□□□□□ -0.54
KDM2A-204ENST00000524657 MCCP23508 829 aa11.7□□□□□ -0.54
KDM2A-204ENST00000524657 TRMT1Q9NXH9 659 aaKnown RBP11.7□□□□□ -0.54
KDM2A-204ENST00000524657 CFAP74Q9C0B2 1584 aa11.69□□□□□ -0.54
KDM2A-204ENST00000524657 TNNT3P45378 269 aaPredicted RBP11.69□□□□□ -0.54
KDM2A-204ENST00000524657 C8orf58Q8NAV2 365 aa11.69□□□□□ -0.54
KDM2A-204ENST00000524657 KIF18AQ8NI77 898 aa11.69□□□□□ -0.54
KDM2A-204ENST00000524657 DDX54Q8TDD1 881 aaKnown RBP11.69□□□□□ -0.54
KDM2A-204ENST00000524657 GTF3C6Q969F1 213 aa11.69□□□□□ -0.54
KDM2A-204ENST00000524657 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
KDM2A-204ENST00000524657 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
KDM2A-204ENST00000524657 PTPRTO14522 1441 aa11.69□□□□□ -0.54
KDM2A-204ENST00000524657 LAMC1P11047 1609 aa11.69□□□□□ -0.54
KDM2A-204ENST00000524657 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
KDM2A-204ENST00000524657 MAP4K4O95819 1239 aaPredicted RBP11.68□□□□□ -0.54
KDM2A-204ENST00000524657 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
KDM2A-204ENST00000524657 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
KDM2A-204ENST00000524657 TMX1Q9H3N1 280 aa11.68□□□□□ -0.54
KDM2A-204ENST00000524657 ATP10BO94823 1461 aa11.68□□□□□ -0.54
KDM2A-204ENST00000524657 DNM1Q05193 864 aaKnown RBP11.68□□□□□ -0.54
KDM2A-204ENST00000524657 ARHGAP31Q2M1Z3 1444 aa11.68□□□□□ -0.54
KDM2A-204ENST00000524657 FERMT3Q86UX7 667 aa11.68□□□□□ -0.54
KDM2A-204ENST00000524657 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
KDM2A-204ENST00000524657 FAM83GA6ND36 823 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 KIF3BO15066 747 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 CAPN2P17655 700 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 ELF2Q15723 593 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 AFAP1Q8N556 730 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 KDM5AP29375 1690 aaKnown RBP11.67□□□□□ -0.54
KDM2A-204ENST00000524657 MYOM1P52179 1685 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 SMTNL1A8MU46 457 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 CPA1P15085 419 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 MEIS3Q99687 375 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 MBIPQ9NS73 344 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 UBE2HP62256 183 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 FAM173BQ6P4H8 233 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 DNAJC2Q99543 621 aaKnown RBP11.67□□□□□ -0.54
KDM2A-204ENST00000524657 SYCP2Q9BX26 1530 aa11.67□□□□□ -0.54
KDM2A-204ENST00000524657 POLR3GO15318 223 aaPredicted RBP11.66□□□□□ -0.54
KDM2A-204ENST00000524657 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
KDM2A-204ENST00000524657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.66□□□□□ -0.54
KDM2A-204ENST00000524657 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.66□□□□□ -0.54
KDM2A-204ENST00000524657 ADAMTS12P58397 1594 aa11.66□□□□□ -0.54
KDM2A-204ENST00000524657 CCDC192P0DO97 292 aa11.66□□□□□ -0.54
KDM2A-204ENST00000524657 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
KDM2A-204ENST00000524657 API5Q9BZZ5 524 aaKnown RBP11.66□□□□□ -0.54
KDM2A-204ENST00000524657 ARID5BQ14865 1188 aa11.66□□□□□ -0.54
KDM2A-204ENST00000524657 CARMIL2Q6F5E8 1435 aa11.66□□□□□ -0.54
KDM2A-204ENST00000524657 CEP135Q66GS9 1140 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 FBXW7Q969H0 707 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 CALCOCO1Q9P1Z2 691 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 TCHHQ07283 1943 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 SYT1P21579 422 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 MCM2P49736 904 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 PDE1AP54750 535 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 FBXO38Q6PIJ6 1188 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 SMC3Q9UQE7 1217 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 STX6O43752 255 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 CUL4AQ13619 759 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 CEP85Q6P2H3 762 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 ZNF428Q96B54 188 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 ESYT1Q9BSJ8 1104 aa11.65□□□□□ -0.54
KDM2A-204ENST00000524657 MORC2Q9Y6X9 1032 aaPredicted RBP11.65□□□□□ -0.54
KDM2A-204ENST00000524657 IL16Q14005 1332 aa11.64□□□□□ -0.55
KDM2A-204ENST00000524657 USP27XA6NNY8 438 aa11.64□□□□□ -0.55
KDM2A-204ENST00000524657 ZSCAN22P10073 491 aaPredicted RBP11.64□□□□□ -0.55
KDM2A-204ENST00000524657 HNRNPH2P55795 449 aaKnown RBP11.64□□□□□ -0.55
KDM2A-204ENST00000524657 ARHGAP5Q13017 1502 aa11.64□□□□□ -0.55
KDM2A-204ENST00000524657 TPM3P06753 285 aa11.64□□□□□ -0.55
KDM2A-204ENST00000524657 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
KDM2A-204ENST00000524657 FILIP1Q7Z7B0 1213 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms