RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 QSER1Q2KHR3 1735 aa17.96■□□□□ 0.47
SF3B2-203ENST00000524627 ST20-MTHFSA0A0A6YYL1 179 aa17.96■□□□□ 0.47
SF3B2-203ENST00000524627 POLD1P28340 1107 aa17.96■□□□□ 0.47
SF3B2-203ENST00000524627 GPR162Q16538 588 aa17.96■□□□□ 0.47
SF3B2-203ENST00000524627 SLC16A10Q8TF71 515 aa17.96■□□□□ 0.47
SF3B2-203ENST00000524627 RGPD2P0DJD1 1756 aa17.96■□□□□ 0.47
SF3B2-203ENST00000524627 ZCRB1Q8TBF4 217 aaKnown RBP17.95■□□□□ 0.46
SF3B2-203ENST00000524627 TUBGCP6Q96RT7 1819 aa17.95■□□□□ 0.46
SF3B2-203ENST00000524627 NSD2O96028 1365 aa17.94■□□□□ 0.46
SF3B2-203ENST00000524627 MEGF6O75095 1541 aa17.94■□□□□ 0.46
SF3B2-203ENST00000524627 SHANK3Q9BYB0 1731 aa17.94■□□□□ 0.46
SF3B2-203ENST00000524627 RRS1Q15050 365 aaKnown RBP17.93■□□□□ 0.46
SF3B2-203ENST00000524627 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
SF3B2-203ENST00000524627 LY75O60449 1722 aa17.92■□□□□ 0.46
SF3B2-203ENST00000524627 USHBP1Q8N6Y0 703 aa17.91■□□□□ 0.46
SF3B2-203ENST00000524627 CCNL1Q9UK58 526 aaPredicted RBP17.91■□□□□ 0.46
SF3B2-203ENST00000524627 COL24A1Q17RW2 1714 aa17.91■□□□□ 0.46
SF3B2-203ENST00000524627 RTL1A6NKG5 1358 aa17.91■□□□□ 0.46
SF3B2-203ENST00000524627 NBPF6Q5VWK0 638 aa17.9■□□□□ 0.46
SF3B2-203ENST00000524627 NBPF4Q96M43 638 aa17.9■□□□□ 0.46
SF3B2-203ENST00000524627 MSH5O43196 834 aa17.89■□□□□ 0.45
SF3B2-203ENST00000524627 SLC24A1O60721 1099 aa17.89■□□□□ 0.45
SF3B2-203ENST00000524627 NLGN2Q8NFZ4 835 aa17.89■□□□□ 0.45
SF3B2-203ENST00000524627 GGNBP2Q9H3C7 697 aa17.89■□□□□ 0.45
SF3B2-203ENST00000524627 USP47Q96K76 1375 aa17.89■□□□□ 0.45
SF3B2-203ENST00000524627 SENP3-EIF4A1A0A087X0R7 540 aa17.88■□□□□ 0.45
SF3B2-203ENST00000524627 C1QTNF8P60827 252 aa17.88■□□□□ 0.45
SF3B2-203ENST00000524627 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
SF3B2-203ENST00000524627 FYB1O15117 783 aa17.87■□□□□ 0.45
SF3B2-203ENST00000524627 RAPGEF4Q8WZA2 1011 aa17.87■□□□□ 0.45
SF3B2-203ENST00000524627 COL23A1Q86Y22 540 aaPredicted RBP17.86■□□□□ 0.45
SF3B2-203ENST00000524627 CGNL1Q0VF96 1302 aa17.86■□□□□ 0.45
SF3B2-203ENST00000524627 TATP17735 454 aaPredicted RBP17.85■□□□□ 0.45
SF3B2-203ENST00000524627 MSL1Q68DK7 614 aa17.85■□□□□ 0.45
SF3B2-203ENST00000524627 TMF1P82094 1093 aa17.84■□□□□ 0.45
SF3B2-203ENST00000524627 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.44
SF3B2-203ENST00000524627 INSRP06213 1382 aa17.82■□□□□ 0.44
SF3B2-203ENST00000524627 PCDH11XQ9BZA7 1347 aa17.82■□□□□ 0.44
SF3B2-203ENST00000524627 PCDH11YQ9BZA8 1340 aa17.82■□□□□ 0.44
SF3B2-203ENST00000524627 YBX3P16989 372 aaKnown RBP eCLIP17.82■□□□□ 0.446e-11■□□□□ 9.7
SF3B2-203ENST00000524627 C5P01031 1676 aa17.82■□□□□ 0.44
SF3B2-203ENST00000524627 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
SF3B2-203ENST00000524627 FLT4P35916 1363 aa17.81■□□□□ 0.44
SF3B2-203ENST00000524627 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
SF3B2-203ENST00000524627 MPRIPQ6WCQ1 1025 aa17.81■□□□□ 0.44
SF3B2-203ENST00000524627 PALLDQ8WX93 1383 aa17.8■□□□□ 0.44
SF3B2-203ENST00000524627 GRIN3BO60391 1043 aa17.79■□□□□ 0.44
SF3B2-203ENST00000524627 CYP27B1O15528 508 aa17.78■□□□□ 0.44
SF3B2-203ENST00000524627 KIF24Q5T7B8 1368 aa17.78■□□□□ 0.44
SF3B2-203ENST00000524627 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.44
SF3B2-203ENST00000524627 EMILIN1Q9Y6C2 1016 aa17.77■□□□□ 0.44
SF3B2-203ENST00000524627 TOGARAM1Q9Y4F4 1720 aa17.77■□□□□ 0.44
SF3B2-203ENST00000524627 CDCA8Q53HL2 280 aa17.76■□□□□ 0.43
SF3B2-203ENST00000524627 FLAD1Q8NFF5 587 aa17.76■□□□□ 0.43
SF3B2-203ENST00000524627 ITGB4P16144 1822 aa17.75■□□□□ 0.43
SF3B2-203ENST00000524627 PPM1GO15355 546 aaPredicted RBP17.75■□□□□ 0.43
SF3B2-203ENST00000524627 HMGB2P26583 209 aaKnown RBP17.75■□□□□ 0.43
SF3B2-203ENST00000524627 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
SF3B2-203ENST00000524627 AK7Q96M32 723 aa17.75■□□□□ 0.43
SF3B2-203ENST00000524627 CD2APQ9Y5K6 639 aa17.75■□□□□ 0.43
SF3B2-203ENST00000524627 C4BP0C0L5 1744 aa17.75■□□□□ 0.43
SF3B2-203ENST00000524627 NSD3Q9BZ95 1437 aa17.74■□□□□ 0.43
SF3B2-203ENST00000524627 AMIGO3Q86WK7 504 aa17.74■□□□□ 0.43
SF3B2-203ENST00000524627 CARD14Q9BXL6 1004 aa17.74■□□□□ 0.43
SF3B2-203ENST00000524627 PKD1L3Q7Z443 1732 aa17.74■□□□□ 0.43
SF3B2-203ENST00000524627 CEP350Q5VT06 3117 aa17.74■□□□□ 0.43
SF3B2-203ENST00000524627 PHF14O94880 888 aa17.73■□□□□ 0.43
SF3B2-203ENST00000524627 PIGBQ92521 554 aa17.73■□□□□ 0.43
SF3B2-203ENST00000524627 SMIM5Q71RC9 77 aa17.72■□□□□ 0.43
SF3B2-203ENST00000524627 ATP10DQ9P241 1426 aa17.72■□□□□ 0.43
SF3B2-203ENST00000524627 SPG7Q9UQ90 795 aa17.71■□□□□ 0.43
SF3B2-203ENST00000524627 NCAPD2Q15021 1401 aa17.71■□□□□ 0.43
SF3B2-203ENST00000524627 UBR3Q6ZT12 1888 aa17.7■□□□□ 0.42
SF3B2-203ENST00000524627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
SF3B2-203ENST00000524627 NKX1-1Q15270 411 aaPredicted RBP17.69■□□□□ 0.42
SF3B2-203ENST00000524627 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
SF3B2-203ENST00000524627 WWC3Q9ULE0 1092 aa17.69■□□□□ 0.42
SF3B2-203ENST00000524627 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
SF3B2-203ENST00000524627 LOC102724428A0A0B4J2F2 783 aa17.68■□□□□ 0.42
SF3B2-203ENST00000524627 SIK1P57059 783 aa17.68■□□□□ 0.42
SF3B2-203ENST00000524627 EYA1Q99502 592 aa17.68■□□□□ 0.42
SF3B2-203ENST00000524627 TMOD3Q9NYL9 352 aa17.68■□□□□ 0.42
SF3B2-203ENST00000524627 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
SF3B2-203ENST00000524627 MAP2P11137 1827 aaKnown RBP17.68■□□□□ 0.42
SF3B2-203ENST00000524627 SSFA2P28290 1259 aa17.67■□□□□ 0.42
SF3B2-203ENST00000524627 IGSF1Q8N6C5 1336 aa17.67■□□□□ 0.42
SF3B2-203ENST00000524627 ZNF526Q8TF50 670 aaPredicted RBP17.66■□□□□ 0.42
SF3B2-203ENST00000524627 GPBP1L1Q9HC44 474 aaPredicted RBP17.66■□□□□ 0.42
SF3B2-203ENST00000524627 ASAP1Q9ULH1 1129 aa17.66■□□□□ 0.42
SF3B2-203ENST00000524627 GNPATO15228 680 aa17.65■□□□□ 0.42
SF3B2-203ENST00000524627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.65■□□□□ 0.429e-11■□□□□ 9.6
SF3B2-203ENST00000524627 PHKG2P15735 406 aa17.64■□□□□ 0.41
SF3B2-203ENST00000524627 ATP6V1AP38606 617 aa17.64■□□□□ 0.41
SF3B2-203ENST00000524627 ITPK1Q13572 414 aa17.64■□□□□ 0.41
SF3B2-203ENST00000524627 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.41
SF3B2-203ENST00000524627 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
SF3B2-203ENST00000524627 ADCY9O60503 1353 aa17.64■□□□□ 0.41
SF3B2-203ENST00000524627 TNNT2P45379 298 aaPredicted RBP17.63■□□□□ 0.41
SF3B2-203ENST00000524627 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
SF3B2-203ENST00000524627 EIF4A2Q14240 407 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms