RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
CAPN11-202ENST00000524554 SYT17Q9BSW7 474 aa13.39□□□□□ -0.27
CAPN11-202ENST00000524554 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
CAPN11-202ENST00000524554 HSP90AB2PQ58FF8 381 aa13.39□□□□□ -0.27
CAPN11-202ENST00000524554 FHDC1Q9C0D6 1143 aaPredicted RBP13.39□□□□□ -0.27
CAPN11-202ENST00000524554 USHBP1Q8N6Y0 703 aa13.38□□□□□ -0.27
CAPN11-202ENST00000524554 SLC27A3Q5K4L6 730 aa13.37□□□□□ -0.27
CAPN11-202ENST00000524554 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
CAPN11-202ENST00000524554 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
CAPN11-202ENST00000524554 USP54Q70EL1 1684 aa13.36□□□□□ -0.27
CAPN11-202ENST00000524554 CDCA8Q53HL2 280 aa13.35□□□□□ -0.27
CAPN11-202ENST00000524554 ARXQ96QS3 562 aa13.35□□□□□ -0.27
CAPN11-202ENST00000524554 YTHDC1Q96MU7 727 aaKnown RBP13.34□□□□□ -0.27
CAPN11-202ENST00000524554 NSD2O96028 1365 aa13.34□□□□□ -0.27
CAPN11-202ENST00000524554 RGPD3A6NKT7 1758 aaPredicted RBP13.34□□□□□ -0.27
CAPN11-202ENST00000524554 RGPD4Q7Z3J3 1758 aa13.34□□□□□ -0.27
CAPN11-202ENST00000524554 PNPLA7Q6ZV29 1317 aa13.33□□□□□ -0.28
CAPN11-202ENST00000524554 MEGF6O75095 1541 aa13.33□□□□□ -0.28
CAPN11-202ENST00000524554 RAPGEF4Q8WZA2 1011 aa13.33□□□□□ -0.28
CAPN11-202ENST00000524554 POLR3GLQ9BT43 218 aa13.33□□□□□ -0.28
CAPN11-202ENST00000524554 TFCP2L1Q9NZI6 479 aa13.33□□□□□ -0.28
CAPN11-202ENST00000524554 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
CAPN11-202ENST00000524554 CASZ1Q86V15 1759 aa13.33□□□□□ -0.28
CAPN11-202ENST00000524554 WNK3Q9BYP7 1800 aa13.32□□□□□ -0.28
CAPN11-202ENST00000524554 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
CAPN11-202ENST00000524554 INSRP06213 1382 aa13.32□□□□□ -0.28
CAPN11-202ENST00000524554 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
CAPN11-202ENST00000524554 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
CAPN11-202ENST00000524554 CYP27B1O15528 508 aa13.31□□□□□ -0.28
CAPN11-202ENST00000524554 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
CAPN11-202ENST00000524554 CCNL1Q9UK58 526 aaPredicted RBP13.3□□□□□ -0.28
CAPN11-202ENST00000524554 NHSQ6T4R5 1651 aa13.3□□□□□ -0.28
CAPN11-202ENST00000524554 COL23A1Q86Y22 540 aaPredicted RBP13.29□□□□□ -0.28
CAPN11-202ENST00000524554 UTRNP46939 3433 aa13.29□□□□□ -0.28
CAPN11-202ENST00000524554 LTN1O94822 1766 aa13.29□□□□□ -0.28
CAPN11-202ENST00000524554 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
CAPN11-202ENST00000524554 FLT4P35916 1363 aa13.28□□□□□ -0.28
CAPN11-202ENST00000524554 MPRIPQ6WCQ1 1025 aa13.28□□□□□ -0.28
CAPN11-202ENST00000524554 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
CAPN11-202ENST00000524554 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.28
CAPN11-202ENST00000524554 PAPPAQ13219 1627 aa13.27□□□□□ -0.29
CAPN11-202ENST00000524554 NSD3Q9BZ95 1437 aa13.27□□□□□ -0.29
CAPN11-202ENST00000524554 ZNF784Q8NCA9 323 aaPredicted RBP13.27□□□□□ -0.29
CAPN11-202ENST00000524554 EYA1Q99502 592 aa13.27□□□□□ -0.29
CAPN11-202ENST00000524554 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.29
CAPN11-202ENST00000524554 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
CAPN11-202ENST00000524554 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
CAPN11-202ENST00000524554 PIGBQ92521 554 aa13.26□□□□□ -0.29
CAPN11-202ENST00000524554 PCDH11XQ9BZA7 1347 aa13.26□□□□□ -0.29
CAPN11-202ENST00000524554 PCDH11YQ9BZA8 1340 aa13.26□□□□□ -0.29
CAPN11-202ENST00000524554 FAM208AQ9UK61 1670 aaKnown RBP13.26□□□□□ -0.29
CAPN11-202ENST00000524554 POLD1P28340 1107 aa13.25□□□□□ -0.29
CAPN11-202ENST00000524554 NLGN2Q8NFZ4 835 aa13.25□□□□□ -0.29
CAPN11-202ENST00000524554 MYOM1P52179 1685 aa13.25□□□□□ -0.29
CAPN11-202ENST00000524554 SMG6Q86US8 1419 aaKnown RBP13.25□□□□□ -0.29
CAPN11-202ENST00000524554 BTAF1O14981 1849 aa13.25□□□□□ -0.29
CAPN11-202ENST00000524554 MSH5O43196 834 aa13.24□□□□□ -0.29
CAPN11-202ENST00000524554 GPR162Q16538 588 aa13.24□□□□□ -0.29
CAPN11-202ENST00000524554 TNNT2P45379 298 aaPredicted RBP13.23□□□□□ -0.29
CAPN11-202ENST00000524554 SMIM5Q71RC9 77 aa13.23□□□□□ -0.29
CAPN11-202ENST00000524554 AMIGO3Q86WK7 504 aa13.23□□□□□ -0.29
CAPN11-202ENST00000524554 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
CAPN11-202ENST00000524554 MSL1Q68DK7 614 aa13.23□□□□□ -0.29
CAPN11-202ENST00000524554 SPG7Q9UQ90 795 aa13.23□□□□□ -0.29
CAPN11-202ENST00000524554 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
CAPN11-202ENST00000524554 PALLDQ8WX93 1383 aa13.22□□□□□ -0.29
CAPN11-202ENST00000524554 PANK3Q9H999 370 aa13.22□□□□□ -0.29
CAPN11-202ENST00000524554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.29
CAPN11-202ENST00000524554 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
CAPN11-202ENST00000524554 NCAPD2Q15021 1401 aa13.2□□□□□ -0.3
CAPN11-202ENST00000524554 RALBP1Q15311 655 aa13.2□□□□□ -0.3
CAPN11-202ENST00000524554 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
CAPN11-202ENST00000524554 RGPD2P0DJD1 1756 aa13.19□□□□□ -0.3
CAPN11-202ENST00000524554 PHKG2P15735 406 aa13.19□□□□□ -0.3
CAPN11-202ENST00000524554 YBX3P16989 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
CAPN11-202ENST00000524554 LOC102724428A0A0B4J2F2 783 aa13.18□□□□□ -0.3
CAPN11-202ENST00000524554 SIK1P57059 783 aa13.18□□□□□ -0.3
CAPN11-202ENST00000524554 IFNL2Q8IZJ0 200 aa13.18□□□□□ -0.3
CAPN11-202ENST00000524554 FLAD1Q8NFF5 587 aa13.18□□□□□ -0.3
CAPN11-202ENST00000524554 KAT6BQ8WYB5 2073 aa13.18□□□□□ -0.3
CAPN11-202ENST00000524554 ITPK1Q13572 414 aa13.18□□□□□ -0.3
CAPN11-202ENST00000524554 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
CAPN11-202ENST00000524554 ATG3Q9NT62 314 aa13.18□□□□□ -0.3
CAPN11-202ENST00000524554 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
CAPN11-202ENST00000524554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
CAPN11-202ENST00000524554 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
CAPN11-202ENST00000524554 AK7Q96M32 723 aa13.17□□□□□ -0.3
CAPN11-202ENST00000524554 MRS2Q9HD23 443 aa13.17□□□□□ -0.3
CAPN11-202ENST00000524554 TMOD3Q9NYL9 352 aa13.17□□□□□ -0.3
CAPN11-202ENST00000524554 CD2APQ9Y5K6 639 aa13.16□□□□□ -0.3
CAPN11-202ENST00000524554 GOLGB1Q14789 3259 aaKnown RBP13.16□□□□□ -0.3
CAPN11-202ENST00000524554 PHF14O94880 888 aa13.15□□□□□ -0.3
CAPN11-202ENST00000524554 SLC4A9Q96Q91 983 aa13.15□□□□□ -0.3
CAPN11-202ENST00000524554 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.31
CAPN11-202ENST00000524554 DOT1LQ8TEK3 1739 aa13.14□□□□□ -0.31
CAPN11-202ENST00000524554 PER1O15534 1290 aaPredicted RBP13.14□□□□□ -0.31
CAPN11-202ENST00000524554 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
CAPN11-202ENST00000524554 MYBBP1AQ9BQG0 1328 aaKnown RBP13.14□□□□□ -0.31
CAPN11-202ENST00000524554 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
CAPN11-202ENST00000524554 SSFA2P28290 1259 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms