RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 NSD2O96028 1365 aa13.48□□□□□ -0.25
CNKSR1-209ENST00000524529 ZNF827Q17R98 1081 aa13.48□□□□□ -0.25
CNKSR1-209ENST00000524529 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
CNKSR1-209ENST00000524529 PPP1R1BQ9UD71 204 aaPredicted RBP13.48□□□□□ -0.25
CNKSR1-209ENST00000524529 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
CNKSR1-209ENST00000524529 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
CNKSR1-209ENST00000524529 QSER1Q2KHR3 1735 aa13.47□□□□□ -0.25
CNKSR1-209ENST00000524529 USHBP1Q8N6Y0 703 aa13.47□□□□□ -0.25
CNKSR1-209ENST00000524529 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
CNKSR1-209ENST00000524529 ANKRD26Q9UPS8 1709 aa13.46□□□□□ -0.25
CNKSR1-209ENST00000524529 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.26
CNKSR1-209ENST00000524529 COL24A1Q17RW2 1714 aa13.45□□□□□ -0.26
CNKSR1-209ENST00000524529 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
CNKSR1-209ENST00000524529 KCNQ4P56696 695 aa13.45□□□□□ -0.26
CNKSR1-209ENST00000524529 ZCRB1Q8TBF4 217 aaKnown RBP13.45□□□□□ -0.26
CNKSR1-209ENST00000524529 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
CNKSR1-209ENST00000524529 EMILIN1Q9Y6C2 1016 aa13.44□□□□□ -0.26
CNKSR1-209ENST00000524529 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
CNKSR1-209ENST00000524529 INSRP06213 1382 aa13.44□□□□□ -0.26
CNKSR1-209ENST00000524529 ITGB4P16144 1822 aa13.43□□□□□ -0.26
CNKSR1-209ENST00000524529 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
CNKSR1-209ENST00000524529 MTFR1LQ9H019 292 aa13.43□□□□□ -0.26
CNKSR1-209ENST00000524529 FLT4P35916 1363 aa13.43□□□□□ -0.26
CNKSR1-209ENST00000524529 PKD1L3Q7Z443 1732 aa13.42□□□□□ -0.26
CNKSR1-209ENST00000524529 SYTL4Q96C24 671 aaPredicted RBP13.42□□□□□ -0.26
CNKSR1-209ENST00000524529 TAF1LQ8IZX4 1826 aa13.41□□□□□ -0.26
CNKSR1-209ENST00000524529 NCAPD2Q15021 1401 aa13.41□□□□□ -0.26
CNKSR1-209ENST00000524529 FHDC1Q9C0D6 1143 aaPredicted RBP13.41□□□□□ -0.26
CNKSR1-209ENST00000524529 KIF24Q5T7B8 1368 aa13.41□□□□□ -0.26
CNKSR1-209ENST00000524529 PNPLA7Q6ZV29 1317 aa13.4□□□□□ -0.26
CNKSR1-209ENST00000524529 SLC27A3Q5K4L6 730 aa13.4□□□□□ -0.26
CNKSR1-209ENST00000524529 SYT17Q9BSW7 474 aa13.4□□□□□ -0.26
CNKSR1-209ENST00000524529 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
CNKSR1-209ENST00000524529 CHD4Q14839 1912 aa13.39□□□□□ -0.27
CNKSR1-209ENST00000524529 CYP27B1O15528 508 aa13.39□□□□□ -0.27
CNKSR1-209ENST00000524529 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
CNKSR1-209ENST00000524529 UTRNP46939 3433 aa13.39□□□□□ -0.27
CNKSR1-209ENST00000524529 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
CNKSR1-209ENST00000524529 C5P01031 1676 aa13.38□□□□□ -0.27
CNKSR1-209ENST00000524529 TATP17735 454 aaPredicted RBP13.38□□□□□ -0.27
CNKSR1-209ENST00000524529 ARXQ96QS3 562 aa13.37□□□□□ -0.27
CNKSR1-209ENST00000524529 HSPA5P11021 654 aaKnown RBP13.36□□□□□ -0.27
CNKSR1-209ENST00000524529 POLKQ9UBT6 870 aa13.36□□□□□ -0.27
CNKSR1-209ENST00000524529 CCNL1Q9UK58 526 aaPredicted RBP13.36□□□□□ -0.27
CNKSR1-209ENST00000524529 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
CNKSR1-209ENST00000524529 PCDH11XQ9BZA7 1347 aa13.36□□□□□ -0.27
CNKSR1-209ENST00000524529 PCDH11YQ9BZA8 1340 aa13.36□□□□□ -0.27
CNKSR1-209ENST00000524529 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
CNKSR1-209ENST00000524529 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
CNKSR1-209ENST00000524529 PPM1GO15355 546 aaPredicted RBP13.35□□□□□ -0.27
CNKSR1-209ENST00000524529 EYA1Q99502 592 aa13.35□□□□□ -0.27
CNKSR1-209ENST00000524529 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
CNKSR1-209ENST00000524529 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
CNKSR1-209ENST00000524529 TFCP2L1Q9NZI6 479 aa13.34□□□□□ -0.27
CNKSR1-209ENST00000524529 UBR3Q6ZT12 1888 aa13.33□□□□□ -0.27
CNKSR1-209ENST00000524529 ZEB1P37275 1124 aaPredicted RBP13.33□□□□□ -0.28
CNKSR1-209ENST00000524529 MPRIPQ6WCQ1 1025 aa13.33□□□□□ -0.28
CNKSR1-209ENST00000524529 COL23A1Q86Y22 540 aaPredicted RBP13.33□□□□□ -0.28
CNKSR1-209ENST00000524529 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
CNKSR1-209ENST00000524529 EIF4G2P78344 907 aaKnown RBP eCLIP13.32□□□□□ -0.28
CNKSR1-209ENST00000524529 EIF4A2Q14240 407 aaKnown RBP13.32□□□□□ -0.28
CNKSR1-209ENST00000524529 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
CNKSR1-209ENST00000524529 AMIGO3Q86WK7 504 aa13.32□□□□□ -0.28
CNKSR1-209ENST00000524529 ZNF784Q8NCA9 323 aaPredicted RBP13.32□□□□□ -0.28
CNKSR1-209ENST00000524529 PANK3Q9H999 370 aa13.32□□□□□ -0.28
CNKSR1-209ENST00000524529 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
CNKSR1-209ENST00000524529 TNNT2P45379 298 aaPredicted RBP13.31□□□□□ -0.28
CNKSR1-209ENST00000524529 PIGBQ92521 554 aa13.31□□□□□ -0.28
CNKSR1-209ENST00000524529 SMIM5Q71RC9 77 aa13.3□□□□□ -0.28
CNKSR1-209ENST00000524529 NLGN2Q8NFZ4 835 aa13.29□□□□□ -0.28
CNKSR1-209ENST00000524529 PHKG2P15735 406 aa13.28□□□□□ -0.28
CNKSR1-209ENST00000524529 POLD1P28340 1107 aa13.28□□□□□ -0.28
CNKSR1-209ENST00000524529 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
CNKSR1-209ENST00000524529 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
CNKSR1-209ENST00000524529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.28□□□□□ -0.28
CNKSR1-209ENST00000524529 SPG7Q9UQ90 795 aa13.28□□□□□ -0.28
CNKSR1-209ENST00000524529 GOLGB1Q14789 3259 aaKnown RBP13.28□□□□□ -0.28
CNKSR1-209ENST00000524529 IGSF1Q8N6C5 1336 aa13.28□□□□□ -0.28
CNKSR1-209ENST00000524529 ASAP1Q9ULH1 1129 aa13.27□□□□□ -0.29
CNKSR1-209ENST00000524529 MSH5O43196 834 aa13.26□□□□□ -0.29
CNKSR1-209ENST00000524529 ITPK1Q13572 414 aa13.25□□□□□ -0.29
CNKSR1-209ENST00000524529 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
CNKSR1-209ENST00000524529 LINC00116Q8NCU8 138 aa13.25□□□□□ -0.29
CNKSR1-209ENST00000524529 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
CNKSR1-209ENST00000524529 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
CNKSR1-209ENST00000524529 LOC102724428A0A0B4J2F2 783 aa13.24□□□□□ -0.29
CNKSR1-209ENST00000524529 SIK1P57059 783 aa13.24□□□□□ -0.29
CNKSR1-209ENST00000524529 AEBP1Q8IUX7 1158 aa13.24□□□□□ -0.29
CNKSR1-209ENST00000524529 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
CNKSR1-209ENST00000524529 ATG3Q9NT62 314 aa13.24□□□□□ -0.29
CNKSR1-209ENST00000524529 KDM6AO15550 1401 aaPredicted RBP13.23□□□□□ -0.29
CNKSR1-209ENST00000524529 VIRMAQ69YN4 1812 aaKnown RBP13.23□□□□□ -0.29
CNKSR1-209ENST00000524529 COL5A3P25940 1745 aaPredicted RBP13.23□□□□□ -0.29
CNKSR1-209ENST00000524529 YBX3P16989 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
CNKSR1-209ENST00000524529 GPR162Q16538 588 aa13.23□□□□□ -0.29
CNKSR1-209ENST00000524529 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
CNKSR1-209ENST00000524529 KDRP35968 1356 aa13.22□□□□□ -0.29
CNKSR1-209ENST00000524529 PLEKHG2Q9H7P9 1386 aa13.22□□□□□ -0.29
CNKSR1-209ENST00000524529 ZNF831Q5JPB2 1677 aa13.22□□□□□ -0.29
CNKSR1-209ENST00000524529 PHF14O94880 888 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms