RNA–Protein interactions for RNA: ENST00000524218.1

TMPRSS4-216, Transcript of transmembrane serine protease 4, humanhuman

TSL 3

Gene TMPRSS4, Length 725 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-216ENST00000524218 PARP4Q9UKK3 1724 aaKnown RBP13.17□□□□□ -0.3
TMPRSS4-216ENST00000524218 USHBP1Q8N6Y0 703 aa13.17□□□□□ -0.3
TMPRSS4-216ENST00000524218 ZCRB1Q8TBF4 217 aaKnown RBP13.17□□□□□ -0.3
TMPRSS4-216ENST00000524218 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
TMPRSS4-216ENST00000524218 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
TMPRSS4-216ENST00000524218 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
TMPRSS4-216ENST00000524218 KDRP35968 1356 aa13.16□□□□□ -0.3
TMPRSS4-216ENST00000524218 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
TMPRSS4-216ENST00000524218 RGPD1P0DJD0 1748 aa13.14□□□□□ -0.31
TMPRSS4-216ENST00000524218 WNK3Q9BYP7 1800 aa13.14□□□□□ -0.31
TMPRSS4-216ENST00000524218 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
TMPRSS4-216ENST00000524218 AMOTQ4VCS5 1084 aa13.14□□□□□ -0.31
TMPRSS4-216ENST00000524218 MARCH10Q8NA82 808 aaPredicted RBP13.14□□□□□ -0.31
TMPRSS4-216ENST00000524218 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
TMPRSS4-216ENST00000524218 OVOS2A0A0G2JMS6 1433 aa13.13□□□□□ -0.31
TMPRSS4-216ENST00000524218 BCL9O00512 1426 aa13.13□□□□□ -0.31
TMPRSS4-216ENST00000524218 FCHSD2O94868 740 aa13.13□□□□□ -0.31
TMPRSS4-216ENST00000524218 BAG6P46379 1132 aa13.13□□□□□ -0.31
TMPRSS4-216ENST00000524218 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
TMPRSS4-216ENST00000524218 MEGF6O75095 1541 aa13.13□□□□□ -0.31
TMPRSS4-216ENST00000524218 TNS2Q63HR2 1409 aa13.13□□□□□ -0.31
TMPRSS4-216ENST00000524218 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
TMPRSS4-216ENST00000524218 PNNQ9H307 717 aaKnown RBP13.12□□□□□ -0.31
TMPRSS4-216ENST00000524218 LRRC37A3O60309 1634 aa13.11□□□□□ -0.31
TMPRSS4-216ENST00000524218 HMOX1P09601 288 aa13.11□□□□□ -0.31
TMPRSS4-216ENST00000524218 U2AF1L5P0DN76 240 aaPredicted RBP13.11□□□□□ -0.31
TMPRSS4-216ENST00000524218 U2AF1Q01081 240 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMPRSS4-216ENST00000524218 EZH2Q15910 746 aaKnown RBP13.11□□□□□ -0.31
TMPRSS4-216ENST00000524218 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
TMPRSS4-216ENST00000524218 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
TMPRSS4-216ENST00000524218 TRIM37O94972 964 aa13.1□□□□□ -0.31
TMPRSS4-216ENST00000524218 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
TMPRSS4-216ENST00000524218 IFNL2Q8IZJ0 200 aa13.1□□□□□ -0.31
TMPRSS4-216ENST00000524218 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
TMPRSS4-216ENST00000524218 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
TMPRSS4-216ENST00000524218 RSPH6AQ9H0K4 717 aa13.09□□□□□ -0.31
TMPRSS4-216ENST00000524218 CYP27B1O15528 508 aa13.08□□□□□ -0.32
TMPRSS4-216ENST00000524218 DIEXFQ68CQ4 756 aaKnown RBP13.08□□□□□ -0.32
TMPRSS4-216ENST00000524218 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
TMPRSS4-216ENST00000524218 HSP90AB1P08238 724 aaKnown RBP13.07□□□□□ -0.32
TMPRSS4-216ENST00000524218 PHKG2P15735 406 aa13.07□□□□□ -0.32
TMPRSS4-216ENST00000524218 PRKAR2BP31323 418 aa13.07□□□□□ -0.32
TMPRSS4-216ENST00000524218 CAMKK2Q96RR4 588 aa13.07□□□□□ -0.32
TMPRSS4-216ENST00000524218 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
TMPRSS4-216ENST00000524218 LRP5O75197 1615 aa13.06□□□□□ -0.32
TMPRSS4-216ENST00000524218 NEFMP07197 916 aa13.06□□□□□ -0.32
TMPRSS4-216ENST00000524218 WDR43Q15061 677 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMPRSS4-216ENST00000524218 AKAP4Q5JQC9 854 aa13.06□□□□□ -0.32
TMPRSS4-216ENST00000524218 GAS2L2Q8NHY3 880 aa13.06□□□□□ -0.32
TMPRSS4-216ENST00000524218 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
TMPRSS4-216ENST00000524218 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
TMPRSS4-216ENST00000524218 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
TMPRSS4-216ENST00000524218 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
TMPRSS4-216ENST00000524218 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
TMPRSS4-216ENST00000524218 PLEKHF1Q96S99 279 aa13.05□□□□□ -0.32
TMPRSS4-216ENST00000524218 APBA3O96018 575 aa13.04□□□□□ -0.32
TMPRSS4-216ENST00000524218 CCDC184Q52MB2 194 aa13.04□□□□□ -0.32
TMPRSS4-216ENST00000524218 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
TMPRSS4-216ENST00000524218 PHACTR3Q96KR7 559 aa13.04□□□□□ -0.32
TMPRSS4-216ENST00000524218 ADAMTS8Q9UP79 889 aa13.04□□□□□ -0.32
TMPRSS4-216ENST00000524218 SHANK3Q9BYB0 1731 aa13.04□□□□□ -0.32
TMPRSS4-216ENST00000524218 ERVV-2B6SEH9 535 aa13.03□□□□□ -0.32
TMPRSS4-216ENST00000524218 CCER2I3L3R5 266 aa13.03□□□□□ -0.32
TMPRSS4-216ENST00000524218 MRS2Q9HD23 443 aa13.03□□□□□ -0.32
TMPRSS4-216ENST00000524218 PLSCR1O15162 318 aa13.02□□□□□ -0.33
TMPRSS4-216ENST00000524218 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
TMPRSS4-216ENST00000524218 KCNA4P22459 653 aa13.02□□□□□ -0.33
TMPRSS4-216ENST00000524218 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
TMPRSS4-216ENST00000524218 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
TMPRSS4-216ENST00000524218 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
TMPRSS4-216ENST00000524218 KCNQ2O43526 872 aa13.01□□□□□ -0.33
TMPRSS4-216ENST00000524218 RUNDC1Q96C34 613 aa13.01□□□□□ -0.33
TMPRSS4-216ENST00000524218 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
TMPRSS4-216ENST00000524218 KAT6BQ8WYB5 2073 aa13□□□□□ -0.33
TMPRSS4-216ENST00000524218 MAPK8IP3Q9UPT6 1336 aa13□□□□□ -0.33
TMPRSS4-216ENST00000524218 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
TMPRSS4-216ENST00000524218 MPRIPQ6WCQ1 1025 aa12.99□□□□□ -0.33
TMPRSS4-216ENST00000524218 PTF1AQ7RTS3 328 aa12.99□□□□□ -0.33
TMPRSS4-216ENST00000524218 CABP4P57796 275 aa12.98□□□□□ -0.33
TMPRSS4-216ENST00000524218 NFE2L2Q16236 605 aa12.98□□□□□ -0.33
TMPRSS4-216ENST00000524218 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
TMPRSS4-216ENST00000524218 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
TMPRSS4-216ENST00000524218 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
TMPRSS4-216ENST00000524218 NHSQ6T4R5 1651 aa12.97□□□□□ -0.33
TMPRSS4-216ENST00000524218 HMGB2P26583 209 aaKnown RBP12.97□□□□□ -0.33
TMPRSS4-216ENST00000524218 IL17REQ8NFR9 667 aa12.97□□□□□ -0.33
TMPRSS4-216ENST00000524218 PIGBQ92521 554 aa12.97□□□□□ -0.33
TMPRSS4-216ENST00000524218 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
TMPRSS4-216ENST00000524218 TMOD3Q9NYL9 352 aa12.97□□□□□ -0.33
TMPRSS4-216ENST00000524218 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.33
TMPRSS4-216ENST00000524218 NUP188Q5SRE5 1749 aa12.96□□□□□ -0.33
TMPRSS4-216ENST00000524218 RREB1Q92766 1687 aa12.96□□□□□ -0.33
TMPRSS4-216ENST00000524218 TMPOP42166 694 aaKnown RBP12.96□□□□□ -0.33
TMPRSS4-216ENST00000524218 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
TMPRSS4-216ENST00000524218 MIER1Q8N108 512 aa12.96□□□□□ -0.33
TMPRSS4-216ENST00000524218 NFATC2IPQ8NCF5 419 aa12.96□□□□□ -0.33
TMPRSS4-216ENST00000524218 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
TMPRSS4-216ENST00000524218 SLC52A2Q9HAB3 445 aa12.96□□□□□ -0.33
TMPRSS4-216ENST00000524218 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
TMPRSS4-216ENST00000524218 RIPK4P57078 832 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms