RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 CABP1Q9NZU7 370 aa12.57□□□□□ -0.4
SPIDR-225ENST00000524141 GPT2Q8TD30 523 aa12.57□□□□□ -0.4
SPIDR-225ENST00000524141 R3HCC1Q9Y3T6 440 aaKnown RBP12.57□□□□□ -0.4
SPIDR-225ENST00000524141 TMEM131LA2VDJ0 1609 aa12.56□□□□□ -0.4
SPIDR-225ENST00000524141 SDSP20132 328 aa12.56□□□□□ -0.4
SPIDR-225ENST00000524141 PKP1Q13835 747 aa12.56□□□□□ -0.4
SPIDR-225ENST00000524141 ERC2O15083 957 aa12.56□□□□□ -0.4
SPIDR-225ENST00000524141 MCM2P49736 904 aa12.56□□□□□ -0.4
SPIDR-225ENST00000524141 C8orf58Q8NAV2 365 aa12.56□□□□□ -0.4
SPIDR-225ENST00000524141 DYNC1I1O14576 645 aa12.55□□□□□ -0.4
SPIDR-225ENST00000524141 IL13P35225 146 aa12.55□□□□□ -0.4
SPIDR-225ENST00000524141 ZGPATQ8N5A5 531 aaKnown RBP12.55□□□□□ -0.4
SPIDR-225ENST00000524141 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
SPIDR-225ENST00000524141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.54□□□□□ -0.43e-6■■■□□ 16.7
SPIDR-225ENST00000524141 AATKQ6ZMQ8 1374 aa12.54□□□□□ -0.4
SPIDR-225ENST00000524141 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
SPIDR-225ENST00000524141 SYAP1Q96A49 352 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-225ENST00000524141 ZDHHC9Q9Y397 364 aa12.54□□□□□ -0.4
SPIDR-225ENST00000524141 ALKQ9UM73 1620 aa12.54□□□□□ -0.4
SPIDR-225ENST00000524141 EDC4Q6P2E9 1401 aaKnown RBP12.53□□□□□ -0.4
SPIDR-225ENST00000524141 UQCRHLA0A096LP55 91 aa12.53□□□□□ -0.4
SPIDR-225ENST00000524141 UQCRHP07919 91 aa12.53□□□□□ -0.4
SPIDR-225ENST00000524141 XPCQ01831 940 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-225ENST00000524141 C16orf71Q8IYS4 520 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-225ENST00000524141 TMEM63CQ9P1W3 806 aa12.53□□□□□ -0.4
SPIDR-225ENST00000524141 PREX1Q8TCU6 1659 aa12.53□□□□□ -0.4
SPIDR-225ENST00000524141 DLC1Q96QB1 1528 aa12.53□□□□□ -0.4
SPIDR-225ENST00000524141 PTPRCP08575 1304 aa12.53□□□□□ -0.4
SPIDR-225ENST00000524141 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
SPIDR-225ENST00000524141 RTL1A6NKG5 1358 aa12.53□□□□□ -0.4
SPIDR-225ENST00000524141 SYCE3A1L190 88 aa12.52□□□□□ -0.4
SPIDR-225ENST00000524141 HMMRO75330 724 aa12.52□□□□□ -0.4
SPIDR-225ENST00000524141 FAM13BQ9NYF5 915 aa12.52□□□□□ -0.4
SPIDR-225ENST00000524141 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.4
SPIDR-225ENST00000524141 PHF14O94880 888 aa12.52□□□□□ -0.41
SPIDR-225ENST00000524141 SASS6Q6UVJ0 657 aa12.52□□□□□ -0.41
SPIDR-225ENST00000524141 OSBPL3Q9H4L5 887 aa12.52□□□□□ -0.41
SPIDR-225ENST00000524141 RGS12O14924 1447 aa12.52□□□□□ -0.41
SPIDR-225ENST00000524141 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.41
SPIDR-225ENST00000524141 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
SPIDR-225ENST00000524141 OTUD7AQ8TE49 926 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-225ENST00000524141 MSH6P52701 1360 aa12.51□□□□□ -0.41
SPIDR-225ENST00000524141 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
SPIDR-225ENST00000524141 MCCP23508 829 aa12.51□□□□□ -0.41
SPIDR-225ENST00000524141 INTS4Q96HW7 963 aaKnown RBP12.51□□□□□ -0.41
SPIDR-225ENST00000524141 BRD1O95696 1058 aa12.5□□□□□ -0.41
SPIDR-225ENST00000524141 TMX3Q96JJ7 454 aa12.5□□□□□ -0.41
SPIDR-225ENST00000524141 TSPY26PQ9H489 355 aa12.5□□□□□ -0.41
SPIDR-225ENST00000524141 NEO1Q92859 1461 aa12.5□□□□□ -0.41
SPIDR-225ENST00000524141 NPM1P06748 294 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPIDR-225ENST00000524141 NEK4P51957 841 aa12.5□□□□□ -0.41
SPIDR-225ENST00000524141 ANAPC15P60006 121 aa12.49□□□□□ -0.41
SPIDR-225ENST00000524141 CUL4AQ13619 759 aa12.49□□□□□ -0.41
SPIDR-225ENST00000524141 FBLN1P23142 703 aa12.49□□□□□ -0.41
SPIDR-225ENST00000524141 KIAA2012Q0VF49 1180 aa12.49□□□□□ -0.41
SPIDR-225ENST00000524141 SMARCA5O60264 1052 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-225ENST00000524141 PTMAP06454 111 aaKnown RBP12.48□□□□□ -0.41
SPIDR-225ENST00000524141 FAM184AQ8NB25 1140 aa12.48□□□□□ -0.41
SPIDR-225ENST00000524141 SSH2Q76I76 1423 aa12.48□□□□□ -0.41
SPIDR-225ENST00000524141 FAM83GA6ND36 823 aa12.48□□□□□ -0.41
SPIDR-225ENST00000524141 PDE1AP54750 535 aa12.48□□□□□ -0.41
SPIDR-225ENST00000524141 COG3Q96JB2 828 aa12.47□□□□□ -0.41
SPIDR-225ENST00000524141 APBB1O00213 710 aa12.47□□□□□ -0.41
SPIDR-225ENST00000524141 MEIS3Q99687 375 aa12.47□□□□□ -0.41
SPIDR-225ENST00000524141 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
SPIDR-225ENST00000524141 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
SPIDR-225ENST00000524141 CHL1O00533 1208 aa12.47□□□□□ -0.41
SPIDR-225ENST00000524141 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.41
SPIDR-225ENST00000524141 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
SPIDR-225ENST00000524141 RNF214Q8ND24 703 aa12.46□□□□□ -0.41
SPIDR-225ENST00000524141 MON2Q7Z3U7 1717 aa12.46□□□□□ -0.41
SPIDR-225ENST00000524141 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.42
SPIDR-225ENST00000524141 SENP3Q9H4L4 574 aaPredicted RBP12.46□□□□□ -0.42
SPIDR-225ENST00000524141 DCTN1Q14203 1278 aa12.45□□□□□ -0.42
SPIDR-225ENST00000524141 NME9Q86XW9 330 aa12.45□□□□□ -0.42
SPIDR-225ENST00000524141 IL17RAQ96F46 866 aa12.45□□□□□ -0.42
SPIDR-225ENST00000524141 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
SPIDR-225ENST00000524141 CCT4P50991 539 aaKnown RBP12.45□□□□□ -0.42
SPIDR-225ENST00000524141 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
SPIDR-225ENST00000524141 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
SPIDR-225ENST00000524141 WDR33Q9C0J8 1336 aaKnown RBP12.45□□□□□ -0.42
SPIDR-225ENST00000524141 HMGN5P82970 282 aaKnown RBP12.44□□□□□ -0.42
SPIDR-225ENST00000524141 FOXD4L5Q5VV16 416 aaPredicted RBP12.44□□□□□ -0.42
SPIDR-225ENST00000524141 FOXD4L4Q8WXT5 416 aaPredicted RBP12.44□□□□□ -0.42
SPIDR-225ENST00000524141 PRIMPOLQ96LW4 560 aa12.44□□□□□ -0.42
SPIDR-225ENST00000524141 RIMBP3CA6NJZ7 1639 aa12.44□□□□□ -0.42
SPIDR-225ENST00000524141 RIMBP3BA6NNM3 1639 aa12.44□□□□□ -0.42
SPIDR-225ENST00000524141 RIMBP3Q9UFD9 1639 aa12.44□□□□□ -0.42
SPIDR-225ENST00000524141 MYRIPQ8NFW9 859 aa12.44□□□□□ -0.42
SPIDR-225ENST00000524141 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPIDR-225ENST00000524141 RICTORQ6R327 1708 aa12.43□□□□□ -0.42
SPIDR-225ENST00000524141 LETM1O95202 739 aaPredicted RBP12.43□□□□□ -0.42
SPIDR-225ENST00000524141 RAPGEF3O95398 923 aa12.43□□□□□ -0.42
SPIDR-225ENST00000524141 CHAMP1Q96JM3 812 aa12.43□□□□□ -0.42
SPIDR-225ENST00000524141 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
SPIDR-225ENST00000524141 RRS1Q15050 365 aaKnown RBP12.42□□□□□ -0.42
SPIDR-225ENST00000524141 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.42□□□□□ -0.42
SPIDR-225ENST00000524141 PIBF1Q8WXW3 757 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
SPIDR-225ENST00000524141 SRCIN1Q9C0H9 1055 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms