RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 GBP4Q96PP9 640 aa10.71□□□□□ -0.69
SREK1-215ENST00000524111 MYL6BP14649 208 aa10.71□□□□□ -0.7
SREK1-215ENST00000524111 DDX17Q92841 729 aaKnown RBP10.71□□□□□ -0.7
SREK1-215ENST00000524111 SETBP1Q9Y6X0 1596 aa10.71□□□□□ -0.7
SREK1-215ENST00000524111 CABLES1Q8TDN4 633 aa10.7□□□□□ -0.7
SREK1-215ENST00000524111 MYOM1P52179 1685 aa10.7□□□□□ -0.7
SREK1-215ENST00000524111 GOLGA6L3A6NEY3 463 aa10.7□□□□□ -0.7
SREK1-215ENST00000524111 PIP4K2AP48426 406 aaPredicted RBP10.7□□□□□ -0.7
SREK1-215ENST00000524111 RAPGEF4Q8WZA2 1011 aa10.7□□□□□ -0.7
SREK1-215ENST00000524111 ANP32BQ92688 251 aaKnown RBP10.7□□□□□ -0.7
SREK1-215ENST00000524111 USP19O94966 1318 aa10.7□□□□□ -0.7
SREK1-215ENST00000524111 TAF7Q15545 349 aaPredicted RBP10.7□□□□□ -0.7
SREK1-215ENST00000524111 SIRT2Q8IXJ6 389 aa10.7□□□□□ -0.7
SREK1-215ENST00000524111 SIL1Q9H173 461 aa10.7□□□□□ -0.7
SREK1-215ENST00000524111 PHAXQ9H814 394 aaKnown RBP10.7□□□□□ -0.7
SREK1-215ENST00000524111 BTBD11A6QL63 1104 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 CHL1O00533 1208 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 SRGAP3O43295 1099 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 NEK4P51957 841 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 CHRNA2Q15822 529 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 JARID2Q92833 1246 aaPredicted RBP10.69□□□□□ -0.7
SREK1-215ENST00000524111 TBX22Q9Y458 520 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 TRAK2O60296 914 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 GNAI3P08754 354 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 ATF3P18847 181 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 HOXC9P31274 260 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 BMP2KLQ5H9B9 411 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 KIAA1211Q6ZU35 1233 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 RPAP2Q8IXW5 612 aaPredicted RBP10.69□□□□□ -0.7
SREK1-215ENST00000524111 ST18O60284 1047 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 MCCP23508 829 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 CCT4P50991 539 aaKnown RBP10.69□□□□□ -0.7
SREK1-215ENST00000524111 ARHGAP45Q92619 1136 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 LGR6Q9HBX8 967 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 MSH6P52701 1360 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 MCM4P33991 863 aa10.69□□□□□ -0.7
SREK1-215ENST00000524111 UPF3BQ9BZI7 483 aaKnown RBP10.69□□□□□ -0.7
SREK1-215ENST00000524111 DDX49Q9Y6V7 483 aaKnown RBP10.69□□□□□ -0.7
SREK1-215ENST00000524111 ARHGEF40Q8TER5 1519 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 REC8O95072 547 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 CEP85Q6P2H3 762 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 DDX54Q8TDD1 881 aaKnown RBP10.68□□□□□ -0.7
SREK1-215ENST00000524111 LARP6Q9BRS8 491 aaKnown RBP10.68□□□□□ -0.7
SREK1-215ENST00000524111 NAP1L2Q9ULW6 460 aaPredicted RBP10.68□□□□□ -0.7
SREK1-215ENST00000524111 FLT4P35916 1363 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 TRIM44Q96DX7 344 aaPredicted RBP10.68□□□□□ -0.7
SREK1-215ENST00000524111 LRRCC1Q9C099 1032 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 SRCIN1Q9C0H9 1055 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 PI4KAP2A4QPH2 592 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 DTNBO60941 627 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 SDSP20132 328 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 PI4KAP1Q8N8J0 262 aa10.68□□□□□ -0.7
SREK1-215ENST00000524111 SLC39A6Q13433 755 aa10.67□□□□□ -0.7
SREK1-215ENST00000524111 PLEKHO1Q53GL0 409 aaPredicted RBP10.67□□□□□ -0.7
SREK1-215ENST00000524111 MCTP1Q6DN14 999 aa10.67□□□□□ -0.7
SREK1-215ENST00000524111 PLEKHM2Q8IWE5 1019 aa10.67□□□□□ -0.7
SREK1-215ENST00000524111 ANKRD44Q8N8A2 993 aa10.67□□□□□ -0.7
SREK1-215ENST00000524111 CHPF2Q9P2E5 772 aa10.67□□□□□ -0.7
SREK1-215ENST00000524111 PPLO60437 1756 aa10.67□□□□□ -0.7
SREK1-215ENST00000524111 KCNQ3O43525 872 aa10.67□□□□□ -0.7
SREK1-215ENST00000524111 SETD1BQ9UPS6 1966 aaKnown RBP10.67□□□□□ -0.7
SREK1-215ENST00000524111 KIAA1210Q9ULL0 1709 aa10.66□□□□□ -0.7
SREK1-215ENST00000524111 PLCB2Q00722 1185 aa10.66□□□□□ -0.7
SREK1-215ENST00000524111 NBPF6Q5VWK0 638 aa10.66□□□□□ -0.7
SREK1-215ENST00000524111 RIC3Q7Z5B4 369 aa10.66□□□□□ -0.7
SREK1-215ENST00000524111 NBPF4Q96M43 638 aa10.66□□□□□ -0.7
SREK1-215ENST00000524111 FAM135BQ49AJ0 1406 aa10.66□□□□□ -0.7
SREK1-215ENST00000524111 TTC21AQ8NDW8 1320 aa10.66□□□□□ -0.7
SREK1-215ENST00000524111 LRRC7Q96NW7 1537 aa10.66□□□□□ -0.7
SREK1-215ENST00000524111 K7ELQ4 463 aaPredicted RBP10.66□□□□□ -0.7
SREK1-215ENST00000524111 IL17REQ8NFR9 667 aa10.66□□□□□ -0.7
SREK1-215ENST00000524111 SIGLEC1Q9BZZ2 1709 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 ZNF853P0CG23 659 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 DCTPP1Q9H773 170 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 CLTCQ00610 1675 aaKnown RBP10.65□□□□□ -0.7
SREK1-215ENST00000524111 CD163L1Q9NR16 1453 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 PNPLA6Q8IY17 1366 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 SSFA2P28290 1259 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 HSPA2P54652 639 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 TTC22Q5TAA0 569 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 CPS1P31327 1500 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 L1TD1Q5T7N2 865 aaKnown RBP10.65□□□□□ -0.7
SREK1-215ENST00000524111 TTC5Q8N0Z6 440 aa10.65□□□□□ -0.7
SREK1-215ENST00000524111 PNMA6EA0A0J9YXQ4 647 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 FGD1P98174 961 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 STRN4Q9NRL3 753 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 ATP7BP35670 1465 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 IQSEC2Q5JU85 1478 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 IFIT2P09913 472 aaKnown RBP10.64□□□□□ -0.71
SREK1-215ENST00000524111 GSPT1P15170 499 aaKnown RBP10.64□□□□□ -0.71
SREK1-215ENST00000524111 KRT28Q7Z3Y7 464 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 PPP1R42Q7Z4L9 355 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 ABCC4O15439 1325 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 PTPRCP08575 1304 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 DDX11L8A8MPP1 907 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 MX1P20591 662 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 ANKRD24Q8TF21 1146 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 DIAPH3Q9NSV4 1193 aa10.64□□□□□ -0.71
SREK1-215ENST00000524111 ZC3H13Q5T200 1668 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms