RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 COL25A1Q9BXS0 654 aaPredicted RBP9.88□□□□□ -0.83
EFCAB13-213ENST00000523978 CNTNAP3Q9BZ76 1288 aa9.88□□□□□ -0.83
EFCAB13-213ENST00000523978 ZNF330Q9Y3S2 320 aaPredicted RBP9.88□□□□□ -0.83
EFCAB13-213ENST00000523978 CDC14CA4D256 554 aa9.87□□□□□ -0.83
EFCAB13-213ENST00000523978 SCTRP47872 440 aa9.87□□□□□ -0.83
EFCAB13-213ENST00000523978 MCCD1P59942 119 aaPredicted RBP9.87□□□□□ -0.83
EFCAB13-213ENST00000523978 CCDC125Q86Z20 511 aa9.87□□□□□ -0.83
EFCAB13-213ENST00000523978 VWA5B2Q8N398 1253 aa9.87□□□□□ -0.83
EFCAB13-213ENST00000523978 PCDHB11Q9Y5F2 797 aa9.87□□□□□ -0.83
EFCAB13-213ENST00000523978 RNF144AP50876 292 aaPredicted RBP9.86□□□□□ -0.83
EFCAB13-213ENST00000523978 RNFT1Q5M7Z0 435 aa9.86□□□□□ -0.83
EFCAB13-213ENST00000523978 ZNF592Q92610 1267 aa9.86□□□□□ -0.83
EFCAB13-213ENST00000523978 TBC1D2BQ9UPU7 963 aa9.86□□□□□ -0.83
EFCAB13-213ENST00000523978 A0A1W2PRU2 124 aa9.85□□□□□ -0.83
EFCAB13-213ENST00000523978 MEN1O00255 615 aa9.85□□□□□ -0.83
EFCAB13-213ENST00000523978 PRICKLE2Q7Z3G6 844 aa9.85□□□□□ -0.83
EFCAB13-213ENST00000523978 RHOQP17081 205 aa9.84□□□□□ -0.83
EFCAB13-213ENST00000523978 SV2AQ7L0J3 742 aa9.84□□□□□ -0.83
EFCAB13-213ENST00000523978 CYP2U1Q7Z449 544 aa9.83□□□□□ -0.84
EFCAB13-213ENST00000523978 OSBPL3Q9H4L5 887 aa9.83□□□□□ -0.84
EFCAB13-213ENST00000523978 CUEDC1Q9NWM3 386 aaPredicted RBP9.83□□□□□ -0.84
EFCAB13-213ENST00000523978 GPC1P35052 558 aa9.82□□□□□ -0.84
EFCAB13-213ENST00000523978 TRAK2O60296 914 aa9.81□□□□□ -0.84
EFCAB13-213ENST00000523978 CCDC85AQ96PX6 553 aaPredicted RBP9.81□□□□□ -0.84
EFCAB13-213ENST00000523978 CEP126Q9P2H0 1117 aa9.81□□□□□ -0.84
EFCAB13-213ENST00000523978 IRF5Q13568 498 aa9.8□□□□□ -0.84
EFCAB13-213ENST00000523978 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
EFCAB13-213ENST00000523978 ARHGEF10LQ9HCE6 1279 aa9.8□□□□□ -0.84
EFCAB13-213ENST00000523978 PRKCSHP14314 528 aaPredicted RBP9.79□□□□□ -0.84
EFCAB13-213ENST00000523978 CLN3Q13286 438 aa9.79□□□□□ -0.84
EFCAB13-213ENST00000523978 CDCA7Q9BWT1 371 aaPredicted RBP9.79□□□□□ -0.84
EFCAB13-213ENST00000523978 RAB6BQ9NRW1 208 aa9.79□□□□□ -0.84
EFCAB13-213ENST00000523978 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
EFCAB13-213ENST00000523978 POU4F2Q12837 409 aa9.77□□□□□ -0.85
EFCAB13-213ENST00000523978 GRIP2Q9C0E4 1043 aa9.77□□□□□ -0.85
EFCAB13-213ENST00000523978 ESF1Q9H501 851 aaKnown RBP9.77□□□□□ -0.85
EFCAB13-213ENST00000523978 PRM3Q9NNZ6 103 aa9.77□□□□□ -0.85
EFCAB13-213ENST00000523978 SLURP2P0DP57 97 aa9.76□□□□□ -0.85
EFCAB13-213ENST00000523978 ZNF385CQ66K41 422 aaPredicted RBP9.76□□□□□ -0.85
EFCAB13-213ENST00000523978 WHAMMQ8TF30 809 aa9.76□□□□□ -0.85
EFCAB13-213ENST00000523978 ZNF837Q96EG3 531 aaPredicted RBP9.76□□□□□ -0.85
EFCAB13-213ENST00000523978 EIF4G2P78344 907 aaKnown RBP eCLIP9.75□□□□□ -0.85
EFCAB13-213ENST00000523978 GAS6Q14393 721 aa9.75□□□□□ -0.85
EFCAB13-213ENST00000523978 GDPD2Q9HCC8 539 aa9.75□□□□□ -0.85
EFCAB13-213ENST00000523978 MYCP01106 439 aaPredicted RBP9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 GNRH1P01148 92 aa9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 IL2RAP01589 272 aa9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 VAC14Q08AM6 782 aa9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 TSGA10IPQ3SY00 556 aa9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 NBPF10Q6P3W6 841 aaKnown RBP9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 RIPOR1Q6ZS17 1223 aa9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 TRIM22Q8IYM9 498 aa9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 SVOPQ8N4V2 548 aa9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 NBPF15Q8N660 670 aa9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 DYRK1BQ9Y463 629 aa9.74□□□□□ -0.85
EFCAB13-213ENST00000523978 SPATA31C2B4DYI2 1134 aa9.73□□□□□ -0.85
EFCAB13-213ENST00000523978 GAS2L1Q99501 681 aaPredicted RBP9.73□□□□□ -0.85
EFCAB13-213ENST00000523978 GPR25O00155 361 aa9.72□□□□□ -0.85
EFCAB13-213ENST00000523978 ABL2P42684 1182 aa9.72□□□□□ -0.85
EFCAB13-213ENST00000523978 RANGAP1P46060 587 aaPredicted RBP9.72□□□□□ -0.85
EFCAB13-213ENST00000523978 DBN1Q16643 649 aa9.72□□□□□ -0.85
EFCAB13-213ENST00000523978 PHTF2Q8N3S3 785 aa9.72□□□□□ -0.85
EFCAB13-213ENST00000523978 CNKSR1Q969H4 720 aa9.72□□□□□ -0.85
EFCAB13-213ENST00000523978 ESYT1Q9BSJ8 1104 aa9.72□□□□□ -0.85
EFCAB13-213ENST00000523978 ADAMTS8Q9UP79 889 aa9.72□□□□□ -0.85
EFCAB13-213ENST00000523978 DOLKQ9UPQ8 538 aa9.72□□□□□ -0.85
EFCAB13-213ENST00000523978 WASLO00401 505 aaPredicted RBP9.71□□□□□ -0.86
EFCAB13-213ENST00000523978 ADAMTS2O95450 1211 aa9.71□□□□□ -0.86
EFCAB13-213ENST00000523978 MCM6Q14566 821 aa9.71□□□□□ -0.86
EFCAB13-213ENST00000523978 SLFNL1Q499Z3 407 aa9.71□□□□□ -0.86
EFCAB13-213ENST00000523978 TAS1R3Q7RTX0 852 aa9.71□□□□□ -0.86
EFCAB13-213ENST00000523978 GMCL1Q96IK5 515 aa9.71□□□□□ -0.86
EFCAB13-213ENST00000523978 CENPCQ03188 943 aa9.7□□□□□ -0.86
EFCAB13-213ENST00000523978 RNF135Q8IUD6 432 aa9.7□□□□□ -0.86
EFCAB13-213ENST00000523978 TIMMDC1Q9NPL8 285 aa9.7□□□□□ -0.86
EFCAB13-213ENST00000523978 HRH3Q9Y5N1 445 aa9.7□□□□□ -0.86
EFCAB13-213ENST00000523978 STAU1O95793 577 aaKnown RBP9.69□□□□□ -0.86
EFCAB13-213ENST00000523978 GSK3AP49840 483 aa9.69□□□□□ -0.86
EFCAB13-213ENST00000523978 SRSF11Q05519 484 aaKnown RBP9.69□□□□□ -0.86
EFCAB13-213ENST00000523978 KCNMA1Q12791 1236 aa9.69□□□□□ -0.86
EFCAB13-213ENST00000523978 WDR44Q5JSH3 913 aa9.69□□□□□ -0.86
EFCAB13-213ENST00000523978 GTPBP3Q969Y2 492 aaKnown RBP9.69□□□□□ -0.86
EFCAB13-213ENST00000523978 XAGE2Q96GT9 111 aa9.69□□□□□ -0.86
EFCAB13-213ENST00000523978 ARHGEF15O94989 841 aa9.68□□□□□ -0.86
EFCAB13-213ENST00000523978 OXLD1Q5BKU9 147 aa9.68□□□□□ -0.86
EFCAB13-213ENST00000523978 H7C1W4 665 aa9.67□□□□□ -0.86
EFCAB13-213ENST00000523978 LYPD4Q6UWN0 246 aa9.67□□□□□ -0.86
EFCAB13-213ENST00000523978 ZSCAN10Q96SZ4 725 aaPredicted RBP9.67□□□□□ -0.86
EFCAB13-213ENST00000523978 FHDC1Q9C0D6 1143 aaPredicted RBP9.67□□□□□ -0.86
EFCAB13-213ENST00000523978 CHIC2Q9UKJ5 165 aa9.67□□□□□ -0.86
EFCAB13-213ENST00000523978 PHKA2P46019 1235 aa9.66□□□□□ -0.86
EFCAB13-213ENST00000523978 USP4Q13107 963 aa9.66□□□□□ -0.86
EFCAB13-213ENST00000523978 WASHC4Q2M389 1173 aa9.66□□□□□ -0.86
EFCAB13-213ENST00000523978 FOXR1Q6PIV2 292 aa9.66□□□□□ -0.86
EFCAB13-213ENST00000523978 ETNK1Q9HBU6 452 aa9.66□□□□□ -0.86
EFCAB13-213ENST00000523978 MBIPQ9NS73 344 aa9.66□□□□□ -0.86
EFCAB13-213ENST00000523978 F11P03951 625 aa9.65□□□□□ -0.86
EFCAB13-213ENST00000523978 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
EFCAB13-213ENST00000523978 GPAMQ9HCL2 828 aa9.65□□□□□ -0.86
EFCAB13-213ENST00000523978 TIMELESSQ9UNS1 1208 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms