RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 MYOM1P52179 1685 aa12.26□□□□□ -0.45
CTNNA1-240ENST00000523912 EIF4G2P78344 907 aaKnown RBP eCLIP12.25□□□□□ -0.45
CTNNA1-240ENST00000523912 ZNF784Q8NCA9 323 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-240ENST00000523912 ZCRB1Q8TBF4 217 aaKnown RBP12.25□□□□□ -0.45
CTNNA1-240ENST00000523912 ARXQ96QS3 562 aa12.25□□□□□ -0.45
CTNNA1-240ENST00000523912 POLR3GLQ9BT43 218 aa12.25□□□□□ -0.45
CTNNA1-240ENST00000523912 INSRP06213 1382 aa12.25□□□□□ -0.45
CTNNA1-240ENST00000523912 FBLN1P23142 703 aa12.24□□□□□ -0.45
CTNNA1-240ENST00000523912 PAPPAQ13219 1627 aa12.24□□□□□ -0.45
CTNNA1-240ENST00000523912 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
CTNNA1-240ENST00000523912 SYTL4Q96C24 671 aaPredicted RBP12.24□□□□□ -0.45
CTNNA1-240ENST00000523912 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
CTNNA1-240ENST00000523912 CHD4Q14839 1912 aa12.23□□□□□ -0.45
CTNNA1-240ENST00000523912 MEGF6O75095 1541 aa12.22□□□□□ -0.45
CTNNA1-240ENST00000523912 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
CTNNA1-240ENST00000523912 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
CTNNA1-240ENST00000523912 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
CTNNA1-240ENST00000523912 CARD14Q9BXL6 1004 aa12.22□□□□□ -0.45
CTNNA1-240ENST00000523912 KIF20BQ96Q89 1820 aa12.22□□□□□ -0.45
CTNNA1-240ENST00000523912 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.45
CTNNA1-240ENST00000523912 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.45
CTNNA1-240ENST00000523912 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-240ENST00000523912 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
CTNNA1-240ENST00000523912 USHBP1Q8N6Y0 703 aa12.21□□□□□ -0.45
CTNNA1-240ENST00000523912 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
CTNNA1-240ENST00000523912 BTAF1O14981 1849 aa12.2□□□□□ -0.46
CTNNA1-240ENST00000523912 QSER1Q2KHR3 1735 aa12.2□□□□□ -0.46
CTNNA1-240ENST00000523912 KAT6BQ8WYB5 2073 aa12.19□□□□□ -0.46
CTNNA1-240ENST00000523912 HSPA5P11021 654 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-240ENST00000523912 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-240ENST00000523912 ZNF827Q17R98 1081 aa12.19□□□□□ -0.46
CTNNA1-240ENST00000523912 LRRC4BQ9NT99 713 aa12.19□□□□□ -0.46
CTNNA1-240ENST00000523912 EMILIN1Q9Y6C2 1016 aa12.19□□□□□ -0.46
CTNNA1-240ENST00000523912 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
CTNNA1-240ENST00000523912 POLD1P28340 1107 aa12.18□□□□□ -0.46
CTNNA1-240ENST00000523912 NSD2O96028 1365 aa12.18□□□□□ -0.46
CTNNA1-240ENST00000523912 WASHC2AQ641Q2 1341 aa12.17□□□□□ -0.46
CTNNA1-240ENST00000523912 C1QTNF8P60827 252 aa12.17□□□□□ -0.46
CTNNA1-240ENST00000523912 TFCP2L1Q9NZI6 479 aa12.16□□□□□ -0.46
CTNNA1-240ENST00000523912 CCNL1Q9UK58 526 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-240ENST00000523912 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
CTNNA1-240ENST00000523912 PNPLA7Q6ZV29 1317 aa12.15□□□□□ -0.46
CTNNA1-240ENST00000523912 TNNT2P45379 298 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-240ENST00000523912 GPR162Q16538 588 aa12.15□□□□□ -0.46
CTNNA1-240ENST00000523912 PANK3Q9H999 370 aa12.15□□□□□ -0.46
CTNNA1-240ENST00000523912 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
CTNNA1-240ENST00000523912 GRIN3BO60391 1043 aa12.14□□□□□ -0.47
CTNNA1-240ENST00000523912 POLKQ9UBT6 870 aa12.14□□□□□ -0.47
CTNNA1-240ENST00000523912 NCAPD2Q15021 1401 aa12.13□□□□□ -0.47
CTNNA1-240ENST00000523912 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-240ENST00000523912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.477e-9■□□□□ 8.5
CTNNA1-240ENST00000523912 KNSTRNQ9Y448 316 aa12.13□□□□□ -0.47
CTNNA1-240ENST00000523912 PLEKHG2Q9H7P9 1386 aa12.13□□□□□ -0.47
CTNNA1-240ENST00000523912 LY75O60449 1722 aa12.12□□□□□ -0.47
CTNNA1-240ENST00000523912 CYP27B1O15528 508 aa12.12□□□□□ -0.47
CTNNA1-240ENST00000523912 MPRIPQ6WCQ1 1025 aa12.12□□□□□ -0.47
CTNNA1-240ENST00000523912 MORC1Q86VD1 984 aa12.12□□□□□ -0.47
CTNNA1-240ENST00000523912 EYA1Q99502 592 aa12.12□□□□□ -0.47
CTNNA1-240ENST00000523912 PALLDQ8WX93 1383 aa12.12□□□□□ -0.47
CTNNA1-240ENST00000523912 RGPD2P0DJD1 1756 aa12.12□□□□□ -0.47
CTNNA1-240ENST00000523912 SHANK3Q9BYB0 1731 aa12.11□□□□□ -0.47
CTNNA1-240ENST00000523912 ANKRD26Q9UPS8 1709 aa12.11□□□□□ -0.47
CTNNA1-240ENST00000523912 SENP3-EIF4A1A0A087X0R7 540 aa12.11□□□□□ -0.47
CTNNA1-240ENST00000523912 FLAD1Q8NFF5 587 aa12.11□□□□□ -0.47
CTNNA1-240ENST00000523912 MSH5O43196 834 aa12.1□□□□□ -0.47
CTNNA1-240ENST00000523912 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-240ENST00000523912 EIF4A2Q14240 407 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-240ENST00000523912 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
CTNNA1-240ENST00000523912 KCNQ4P56696 695 aa12.09□□□□□ -0.47
CTNNA1-240ENST00000523912 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-240ENST00000523912 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
CTNNA1-240ENST00000523912 IGSF1Q8N6C5 1336 aa12.09□□□□□ -0.47
CTNNA1-240ENST00000523912 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.47
CTNNA1-240ENST00000523912 HSP90AB1P08238 724 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-240ENST00000523912 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
CTNNA1-240ENST00000523912 AK7Q96M32 723 aa12.08□□□□□ -0.48
CTNNA1-240ENST00000523912 CD2APQ9Y5K6 639 aa12.08□□□□□ -0.48
CTNNA1-240ENST00000523912 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
CTNNA1-240ENST00000523912 PHKG2P15735 406 aa12.07□□□□□ -0.48
CTNNA1-240ENST00000523912 PLEKHO1Q53GL0 409 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-240ENST00000523912 COL23A1Q86Y22 540 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-240ENST00000523912 NLGN2Q8NFZ4 835 aa12.07□□□□□ -0.48
CTNNA1-240ENST00000523912 PIGBQ92521 554 aa12.07□□□□□ -0.48
CTNNA1-240ENST00000523912 KIF7Q2M1P5 1343 aa12.07□□□□□ -0.48
CTNNA1-240ENST00000523912 AMOTQ4VCS5 1084 aa12.06□□□□□ -0.48
CTNNA1-240ENST00000523912 MAP2P11137 1827 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-240ENST00000523912 C1orf141Q5JVX7 400 aa12.05□□□□□ -0.48
CTNNA1-240ENST00000523912 DCAF5Q96JK2 942 aa12.05□□□□□ -0.48
CTNNA1-240ENST00000523912 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
CTNNA1-240ENST00000523912 YBX3P16989 372 aaKnown RBP eCLIP12.04□□□□□ -0.48
CTNNA1-240ENST00000523912 SIK1P57059 783 aa12.04□□□□□ -0.48
CTNNA1-240ENST00000523912 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-240ENST00000523912 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-240ENST00000523912 ERVV-2B6SEH9 535 aa12.03□□□□□ -0.48
CTNNA1-240ENST00000523912 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-240ENST00000523912 TOGARAM1Q9Y4F4 1720 aa12.03□□□□□ -0.48
CTNNA1-240ENST00000523912 PHF14O94880 888 aa12.02□□□□□ -0.49
CTNNA1-240ENST00000523912 SSFA2P28290 1259 aa12.02□□□□□ -0.49
CTNNA1-240ENST00000523912 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
CTNNA1-240ENST00000523912 SULT6B1Q6IMI4 303 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms