RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 FAM83GA6ND36 823 aa8.77□□□□□ -1.01
PVT1-217ENST00000523190 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
PVT1-217ENST00000523190 LMOD3Q0VAK6 560 aa8.77□□□□□ -1.01
PVT1-217ENST00000523190 DCTN1Q14203 1278 aa8.77□□□□□ -1.01
PVT1-217ENST00000523190 MTHFSDQ2M296 383 aaKnown RBP8.77□□□□□ -1.01
PVT1-217ENST00000523190 RCAN3Q9UKA8 241 aa8.77□□□□□ -1.01
PVT1-217ENST00000523190 COL5A2P05997 1499 aaPredicted RBP8.77□□□□□ -1.01
PVT1-217ENST00000523190 NEFLP07196 543 aa8.76□□□□□ -1.01
PVT1-217ENST00000523190 IRX6P78412 446 aaPredicted RBP8.76□□□□□ -1.01
PVT1-217ENST00000523190 GAS2L2Q8NHY3 880 aa8.76□□□□□ -1.01
PVT1-217ENST00000523190 TSR2Q969E8 191 aaKnown RBP8.76□□□□□ -1.01
PVT1-217ENST00000523190 MYH16Q9H6N6 1097 aa8.76□□□□□ -1.01
PVT1-217ENST00000523190 NLRP2Q9NX02 1062 aa8.76□□□□□ -1.01
PVT1-217ENST00000523190 IL16Q14005 1332 aa8.76□□□□□ -1.01
PVT1-217ENST00000523190 FANCIQ9NVI1 1328 aa8.76□□□□□ -1.01
PVT1-217ENST00000523190 COL14A1Q05707 1796 aaKnown RBP8.75□□□□□ -1.01
PVT1-217ENST00000523190 LRRC37A3O60309 1634 aa8.74□□□□□ -1.01
PVT1-217ENST00000523190 CALD1Q05682 793 aaKnown RBP8.74□□□□□ -1.01
PVT1-217ENST00000523190 MCM10Q7L590 875 aa8.74□□□□□ -1.01
PVT1-217ENST00000523190 STRN4Q9NRL3 753 aa8.74□□□□□ -1.01
PVT1-217ENST00000523190 LAS1LQ9Y4W2 734 aaKnown RBP8.74□□□□□ -1.01
PVT1-217ENST00000523190 RNF123Q5XPI4 1314 aa8.74□□□□□ -1.01
PVT1-217ENST00000523190 WDR17Q8IZU2 1322 aa8.74□□□□□ -1.01
PVT1-217ENST00000523190 MEGF6O75095 1541 aa8.74□□□□□ -1.01
PVT1-217ENST00000523190 MAP3K5Q99683 1374 aa8.73□□□□□ -1.01
PVT1-217ENST00000523190 SPDYE4A6NLX3 237 aa8.73□□□□□ -1.01
PVT1-217ENST00000523190 RRP1P56182 461 aaKnown RBP8.73□□□□□ -1.01
PVT1-217ENST00000523190 PLEKHO1Q53GL0 409 aaPredicted RBP8.73□□□□□ -1.01
PVT1-217ENST00000523190 ZNF530Q6P9A1 599 aaPredicted RBP8.73□□□□□ -1.01
PVT1-217ENST00000523190 TOM1L2Q6ZVM7 507 aa8.73□□□□□ -1.01
PVT1-217ENST00000523190 RTF1Q92541 710 aaKnown RBP8.73□□□□□ -1.01
PVT1-217ENST00000523190 CRB1P82279 1406 aa8.72□□□□□ -1.01
PVT1-217ENST00000523190 PLCH1Q4KWH8 1693 aa8.72□□□□□ -1.01
PVT1-217ENST00000523190 NUTM2BA6NNL0 878 aaPredicted RBP8.72□□□□□ -1.01
PVT1-217ENST00000523190 GNAT3A8MTJ3 354 aa8.72□□□□□ -1.01
PVT1-217ENST00000523190 NUTM2EB1AL46 878 aaPredicted RBP8.72□□□□□ -1.01
PVT1-217ENST00000523190 ADAMTS2O95450 1211 aa8.72□□□□□ -1.01
PVT1-217ENST00000523190 ZNF853P0CG23 659 aa8.72□□□□□ -1.01
PVT1-217ENST00000523190 TATP17735 454 aaPredicted RBP8.72□□□□□ -1.01
PVT1-217ENST00000523190 GNAI1P63096 354 aa8.72□□□□□ -1.01
PVT1-217ENST00000523190 EXOSC9Q06265 439 aaKnown RBP8.72□□□□□ -1.01
PVT1-217ENST00000523190 NUTM2AQ8IVF1 878 aaPredicted RBP8.72□□□□□ -1.01
PVT1-217ENST00000523190 RAPGEF4Q8WZA2 1011 aa8.72□□□□□ -1.01
PVT1-217ENST00000523190 IFT57Q9NWB7 429 aa8.72□□□□□ -1.01
PVT1-217ENST00000523190 BTG4Q9NY30 223 aa8.72□□□□□ -1.01
PVT1-217ENST00000523190 HTATSF1O43719 755 aaKnown RBP8.71□□□□□ -1.02
PVT1-217ENST00000523190 EVA1CP58658 441 aa8.71□□□□□ -1.02
PVT1-217ENST00000523190 AMOTQ4VCS5 1084 aa8.71□□□□□ -1.02
PVT1-217ENST00000523190 LARP1Q6PKG0 1096 aaKnown RBP8.71□□□□□ -1.02
PVT1-217ENST00000523190 CFAP44Q96MT7 982 aa8.71□□□□□ -1.02
PVT1-217ENST00000523190 MBIPQ9NS73 344 aa8.71□□□□□ -1.02
PVT1-217ENST00000523190 JCADQ9P266 1359 aa8.71□□□□□ -1.02
PVT1-217ENST00000523190 PKD1L3Q7Z443 1732 aa8.71□□□□□ -1.02
PVT1-217ENST00000523190 NRAPQ86VF7 1730 aa8.71□□□□□ -1.02
PVT1-217ENST00000523190 PARP4Q9UKK3 1724 aaKnown RBP8.71□□□□□ -1.02
PVT1-217ENST00000523190 PLIN1O60240 522 aa8.7□□□□□ -1.02
PVT1-217ENST00000523190 AKAP4Q5JQC9 854 aa8.7□□□□□ -1.02
PVT1-217ENST00000523190 C1orf141Q5JVX7 400 aa8.7□□□□□ -1.02
PVT1-217ENST00000523190 IL17REQ8NFR9 667 aa8.7□□□□□ -1.02
PVT1-217ENST00000523190 CARD10Q9BWT7 1032 aa8.7□□□□□ -1.02
PVT1-217ENST00000523190 OVOS2A0A0G2JMS6 1433 aa8.7□□□□□ -1.02
PVT1-217ENST00000523190 BCAR3O75815 825 aa8.69□□□□□ -1.02
PVT1-217ENST00000523190 LGR6Q9HBX8 967 aa8.69□□□□□ -1.02
PVT1-217ENST00000523190 SPG7Q9UQ90 795 aa8.69□□□□□ -1.02
PVT1-217ENST00000523190 PLEKHG2Q9H7P9 1386 aa8.69□□□□□ -1.02
PVT1-217ENST00000523190 CHL1O00533 1208 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 RNMTO43148 476 aaKnown RBP8.68□□□□□ -1.02
PVT1-217ENST00000523190 CT47B1P0C2W7 299 aaPredicted RBP8.68□□□□□ -1.02
PVT1-217ENST00000523190 IL2RBP14784 551 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 HSPA1LP34931 641 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 RARSP54136 660 aaKnown RBP8.68□□□□□ -1.02
PVT1-217ENST00000523190 MYT1Q01538 1121 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 MPRIPQ6WCQ1 1025 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 TSPYL6Q8N831 410 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 BCL2L13Q9BXK5 485 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 MIS18AQ9NYP9 233 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 USP35Q9P2H5 1018 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 TSPYL4Q9UJ04 414 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 CEMIPQ8WUJ3 1361 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 KDM6AO15550 1401 aaPredicted RBP8.68□□□□□ -1.02
PVT1-217ENST00000523190 LRP6O75581 1613 aa8.68□□□□□ -1.02
PVT1-217ENST00000523190 VIRMAQ69YN4 1812 aaKnown RBP8.68□□□□□ -1.02
PVT1-217ENST00000523190 ELL2O00472 640 aaPredicted RBP8.67□□□□□ -1.02
PVT1-217ENST00000523190 SLIT2O94813 1529 aa8.67□□□□□ -1.02
PVT1-217ENST00000523190 PHKG2P15735 406 aa8.67□□□□□ -1.02
PVT1-217ENST00000523190 KRT24Q2M2I5 525 aa8.67□□□□□ -1.02
PVT1-217ENST00000523190 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.67□□□□□ -1.02
PVT1-217ENST00000523190 C8orf58Q8NAV2 365 aa8.67□□□□□ -1.02
PVT1-217ENST00000523190 SHANK3Q9BYB0 1731 aa8.67□□□□□ -1.02
PVT1-217ENST00000523190 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.67□□□□□ -1.022e-6■□□□□ 9.5
PVT1-217ENST00000523190 ADAMTS7Q9UKP4 1686 aa8.67□□□□□ -1.02
PVT1-217ENST00000523190 WNK3Q9BYP7 1800 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 NWD2Q9ULI1 1742 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 DISP2A7MBM2 1401 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 SPATA31A6Q5VVP1 1343 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 CYP27B1O15528 508 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 CANXP27824 592 aaKnown RBP8.66□□□□□ -1.02
PVT1-217ENST00000523190 PLCB2Q00722 1185 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 TEFQ10587 303 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 TAF7Q15545 349 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms