RNA–Protein interactions for RNA: ENST00000523094.5

CLINT1-206, Transcript of clathrin interactor 1, humanhuman

TSL 2 BASIC

Gene CLINT1, Length 3,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-206ENST00000523094 PDLIM2Q96JY6 352 aa15.2■□□□□ 0.02
CLINT1-206ENST00000523094 PRIM1P49642 420 aaKnown RBP15.2■□□□□ 0.02
CLINT1-206ENST00000523094 CDK19Q9BWU1 502 aa15.2■□□□□ 0.02
CLINT1-206ENST00000523094 KIF24Q5T7B8 1368 aa15.2■□□□□ 0.02
CLINT1-206ENST00000523094 PRPF40AO75400 957 aaKnown RBP15.19■□□□□ 0.02
CLINT1-206ENST00000523094 IDI1Q13907 227 aa15.19■□□□□ 0.02
CLINT1-206ENST00000523094 YTHDC2Q9H6S0 1430 aaKnown RBP15.19■□□□□ 0.02
CLINT1-206ENST00000523094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.19■□□□□ 0.02
CLINT1-206ENST00000523094 GPT2Q8TD30 523 aa15.19■□□□□ 0.02
CLINT1-206ENST00000523094 ZGPATQ8N5A5 531 aaKnown RBP15.19■□□□□ 0.02
CLINT1-206ENST00000523094 RBM27Q9P2N5 1060 aaKnown RBP15.19■□□□□ 0.02
CLINT1-206ENST00000523094 YEATS2Q9ULM3 1422 aa15.18■□□□□ 0.02
CLINT1-206ENST00000523094 ST18O60284 1047 aa15.18■□□□□ 0.02
CLINT1-206ENST00000523094 ZNF500O60304 480 aaPredicted RBP15.18■□□□□ 0.02
CLINT1-206ENST00000523094 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.18■□□□□ 0.02
CLINT1-206ENST00000523094 MPNDQ8N594 471 aa15.18■□□□□ 0.02
CLINT1-206ENST00000523094 R3HCC1Q9Y3T6 440 aaKnown RBP15.18■□□□□ 0.02
CLINT1-206ENST00000523094 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
CLINT1-206ENST00000523094 ZDHHC9Q9Y397 364 aa15.17■□□□□ 0.02
CLINT1-206ENST00000523094 SDSP20132 328 aa15.17■□□□□ 0.02
CLINT1-206ENST00000523094 CASC1Q6TDU7 716 aa15.17■□□□□ 0.02
CLINT1-206ENST00000523094 ANKRD44Q8N8A2 993 aa15.16■□□□□ 0.02
CLINT1-206ENST00000523094 ARHGEF40Q8TER5 1519 aa15.16■□□□□ 0.02
CLINT1-206ENST00000523094 IL13P35225 146 aa15.16■□□□□ 0.02
CLINT1-206ENST00000523094 XPCQ01831 940 aaPredicted RBP15.16■□□□□ 0.02
CLINT1-206ENST00000523094 BCL11BQ9C0K0 894 aaPredicted RBP15.16■□□□□ 0.02
CLINT1-206ENST00000523094 LMOD3Q0VAK6 560 aa15.15■□□□□ 0.02
CLINT1-206ENST00000523094 LRSAM1Q6UWE0 723 aa15.15■□□□□ 0.02
CLINT1-206ENST00000523094 EMILIN1Q9Y6C2 1016 aa15.15■□□□□ 0.02
CLINT1-206ENST00000523094 ATP10DQ9P241 1426 aa15.15■□□□□ 0.02
CLINT1-206ENST00000523094 TMEM63CQ9P1W3 806 aa15.14■□□□□ 0.01
CLINT1-206ENST00000523094 ZKSCAN5Q9Y2L8 839 aa15.14■□□□□ 0.01
CLINT1-206ENST00000523094 A0A0U1RQG5 324 aaPredicted RBP15.14■□□□□ 0.01
CLINT1-206ENST00000523094 SMARCA5O60264 1052 aaPredicted RBP15.14■□□□□ 0.01
CLINT1-206ENST00000523094 MAP2P11137 1827 aaKnown RBP15.14■□□□□ 0.01
CLINT1-206ENST00000523094 RIMS2Q9UQ26 1411 aa15.14■□□□□ 0.01
CLINT1-206ENST00000523094 MYO5BQ9ULV0 1848 aa15.14■□□□□ 0.01
CLINT1-206ENST00000523094 FAM83GA6ND36 823 aa15.13■□□□□ 0.01
CLINT1-206ENST00000523094 CEP85Q6P2H3 762 aa15.13■□□□□ 0.01
CLINT1-206ENST00000523094 RPAP2Q8IXW5 612 aaPredicted RBP15.13■□□□□ 0.01
CLINT1-206ENST00000523094 CHAMP1Q96JM3 812 aa15.13■□□□□ 0.01
CLINT1-206ENST00000523094 SLC52A1Q9NWF4 448 aa15.13■□□□□ 0.01
CLINT1-206ENST00000523094 SYCE3A1L190 88 aa15.13■□□□□ 0.01
CLINT1-206ENST00000523094 REC8O95072 547 aa15.13■□□□□ 0.01
CLINT1-206ENST00000523094 NSFL1CQ9UNZ2 370 aaKnown RBP15.12■□□□□ 0.01
CLINT1-206ENST00000523094 DLG5Q8TDM6 1919 aa15.12■□□□□ 0.01
CLINT1-206ENST00000523094 UQCRHLA0A096LP55 91 aa15.12■□□□□ 0.01
CLINT1-206ENST00000523094 UQCRHP07919 91 aa15.12■□□□□ 0.01
CLINT1-206ENST00000523094 MCM5P33992 734 aa15.12■□□□□ 0.01
CLINT1-206ENST00000523094 RNF214Q8ND24 703 aa15.12■□□□□ 0.01
CLINT1-206ENST00000523094 DCTN1Q14203 1278 aa15.11■□□□□ 0.01
CLINT1-206ENST00000523094 CSPP1Q1MSJ5 1256 aa15.11■□□□□ 0.01
CLINT1-206ENST00000523094 ERC2O15083 957 aa15.11■□□□□ 0.01
CLINT1-206ENST00000523094 CCDC39Q9UFE4 941 aa15.11■□□□□ 0.01
CLINT1-206ENST00000523094 ATP7BP35670 1465 aa15.11■□□□□ 0.01
CLINT1-206ENST00000523094 TMEM131LA2VDJ0 1609 aa15.11■□□□□ 0.01
CLINT1-206ENST00000523094 MAP7D2Q96T17 732 aa15.11■□□□□ 0.01
CLINT1-206ENST00000523094 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
CLINT1-206ENST00000523094 RGS12O14924 1447 aa15.11■□□□□ 0.01
CLINT1-206ENST00000523094 CDK12Q9NYV4 1490 aaPredicted RBP15.11■□□□□ 0.01
CLINT1-206ENST00000523094 RTL1A6NKG5 1358 aa15.1■□□□□ 0.01
CLINT1-206ENST00000523094 CPSF1Q10570 1443 aaKnown RBP15.1■□□□□ 0.01
CLINT1-206ENST00000523094 MSH6P52701 1360 aa15.09■□□□□ 0.01
CLINT1-206ENST00000523094 ALKQ9UM73 1620 aa15.09■□□□□ 0.01
CLINT1-206ENST00000523094 MBD3O95983 291 aa15.09■□□□□ 0.01
CLINT1-206ENST00000523094 DRC7Q8IY82 874 aa15.08■□□□□ 0
CLINT1-206ENST00000523094 TMX3Q96JJ7 454 aa15.08■□□□□ 0
CLINT1-206ENST00000523094 NEK4P51957 841 aa15.08■□□□□ 0
CLINT1-206ENST00000523094 KIAA2012Q0VF49 1180 aa15.08■□□□□ 0
CLINT1-206ENST00000523094 NME9Q86XW9 330 aa15.08■□□□□ 0
CLINT1-206ENST00000523094 MEIS3Q99687 375 aa15.08■□□□□ 0
CLINT1-206ENST00000523094 KRT24Q2M2I5 525 aa15.07■□□□□ 0
CLINT1-206ENST00000523094 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
CLINT1-206ENST00000523094 DIP2CQ9Y2E4 1556 aa15.06■□□□□ 0
CLINT1-206ENST00000523094 DYNC1I1O14576 645 aa15.06■□□□□ 0
CLINT1-206ENST00000523094 RAPGEF3O95398 923 aa15.06■□□□□ 0
CLINT1-206ENST00000523094 BRD1O95696 1058 aa15.06■□□□□ 0
CLINT1-206ENST00000523094 AATKQ6ZMQ8 1374 aa15.06■□□□□ 0
CLINT1-206ENST00000523094 CDK11BP21127 795 aaKnown RBP15.06■□□□□ 0
CLINT1-206ENST00000523094 SASS6Q6UVJ0 657 aa15.06■□□□□ 0
CLINT1-206ENST00000523094 WAPLQ7Z5K2 1190 aa15.06■□□□□ 0
CLINT1-206ENST00000523094 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
CLINT1-206ENST00000523094 HAP1P54257 671 aaPredicted RBP15.05■□□□□ 0
CLINT1-206ENST00000523094 TSPY26PQ9H489 355 aa15.05■□□□□ 0
CLINT1-206ENST00000523094 PREX1Q8TCU6 1659 aa15.05■□□□□ 0
CLINT1-206ENST00000523094 PTPRCP08575 1304 aa15.05■□□□□ -0
CLINT1-206ENST00000523094 RRS1Q15050 365 aaKnown RBP15.05■□□□□ -0
CLINT1-206ENST00000523094 SLC4A10Q6U841 1118 aa15.05■□□□□ -0
CLINT1-206ENST00000523094 OSBPL3Q9H4L5 887 aa15.05■□□□□ -0
CLINT1-206ENST00000523094 MCM2P49736 904 aa15.05■□□□□ -0
CLINT1-206ENST00000523094 PDE1AP54750 535 aa15.05■□□□□ -0
CLINT1-206ENST00000523094 CHAF1AQ13111 956 aaPredicted RBP15.04■□□□□ -0
CLINT1-206ENST00000523094 CUL4AQ13619 759 aa15.04■□□□□ -0
CLINT1-206ENST00000523094 C14orf37Q86TY3 774 aa15.04■□□□□ -0
CLINT1-206ENST00000523094 KCNJ4P48050 445 aa15.04■□□□□ -0
CLINT1-206ENST00000523094 HMMRO75330 724 aa15.03■□□□□ -0
CLINT1-206ENST00000523094 TRIM6-TRIM34B2RNG4 842 aa15.03■□□□□ -0
CLINT1-206ENST00000523094 CHL1O00533 1208 aa15.03■□□□□ -0
CLINT1-206ENST00000523094 MTERF4Q7Z6M4 381 aaKnown RBP15.03■□□□□ -0
CLINT1-206ENST00000523094 COG3Q96JB2 828 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms