RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 TWISTNBQ3B726 338 aaPredicted RBP21.6■■□□□ 1.05
SREK1-212ENST00000522912 NBPF6Q5VWK0 638 aa21.6■■□□□ 1.05
SREK1-212ENST00000522912 SKAP1Q86WV1 359 aa21.6■■□□□ 1.05
SREK1-212ENST00000522912 FTSJ3Q8IY81 847 aaKnown RBP21.6■■□□□ 1.05
SREK1-212ENST00000522912 NBPF4Q96M43 638 aa21.6■■□□□ 1.05
SREK1-212ENST00000522912 MED1Q15648 1581 aaPredicted RBP21.6■■□□□ 1.05
SREK1-212ENST00000522912 KIF16BQ96L93 1317 aa21.59■■□□□ 1.05
SREK1-212ENST00000522912 ZNF335Q9H4Z2 1342 aaPredicted RBP21.59■■□□□ 1.05
SREK1-212ENST00000522912 AAMPQ13685 434 aa21.58■■□□□ 1.05
SREK1-212ENST00000522912 MRPL50Q8N5N7 158 aaKnown RBP21.58■■□□□ 1.05
SREK1-212ENST00000522912 RTF1Q92541 710 aaKnown RBP21.58■■□□□ 1.04
SREK1-212ENST00000522912 TCERG1O14776 1098 aaKnown RBP21.57■■□□□ 1.04
SREK1-212ENST00000522912 IGHDP01880 384 aa21.57■■□□□ 1.04
SREK1-212ENST00000522912 RGPD5Q99666 1765 aa21.57■■□□□ 1.04
SREK1-212ENST00000522912 IPO8O15397 1037 aaKnown RBP21.56■■□□□ 1.04
SREK1-212ENST00000522912 LRRC37A3O60309 1634 aa21.56■■□□□ 1.04
SREK1-212ENST00000522912 NPHP3Q7Z494 1330 aa21.56■■□□□ 1.04
SREK1-212ENST00000522912 HTATSF1O43719 755 aaKnown RBP21.56■■□□□ 1.04
SREK1-212ENST00000522912 LRRC59Q96AG4 307 aaKnown RBP21.56■■□□□ 1.04
SREK1-212ENST00000522912 PXDNQ92626 1479 aa21.55■■□□□ 1.04
SREK1-212ENST00000522912 KRT24Q2M2I5 525 aa21.55■■□□□ 1.04
SREK1-212ENST00000522912 PCDHB15Q9Y5E8 787 aa21.55■■□□□ 1.04
SREK1-212ENST00000522912 GNAT3A8MTJ3 354 aa21.54■■□□□ 1.04
SREK1-212ENST00000522912 MIS18AQ9NYP9 233 aa21.54■■□□□ 1.04
SREK1-212ENST00000522912 AXIN2Q9Y2T1 843 aa21.54■■□□□ 1.04
SREK1-212ENST00000522912 TMEM57Q8N5G2 664 aa21.53■■□□□ 1.04
SREK1-212ENST00000522912 KIAA0232Q92628 1395 aa21.53■■□□□ 1.04
SREK1-212ENST00000522912 MAP3K5Q99683 1374 aa21.53■■□□□ 1.04
SREK1-212ENST00000522912 TNS3Q68CZ2 1445 aa21.53■■□□□ 1.04
SREK1-212ENST00000522912 ZC3H6P61129 1189 aaKnown RBP21.52■■□□□ 1.04
SREK1-212ENST00000522912 ANKRD24Q8TF21 1146 aa21.52■■□□□ 1.04
SREK1-212ENST00000522912 NCAPD2Q15021 1401 aa21.52■■□□□ 1.04
SREK1-212ENST00000522912 BRINP3Q76B58 766 aa21.51■■□□□ 1.03
SREK1-212ENST00000522912 ITPRIPQ8IWB1 547 aa21.51■■□□□ 1.03
SREK1-212ENST00000522912 CAMTA1Q9Y6Y1 1673 aa21.51■■□□□ 1.03
SREK1-212ENST00000522912 IL17REQ8NFR9 667 aa21.51■■□□□ 1.03
SREK1-212ENST00000522912 ARHGAP45Q92619 1136 aa21.51■■□□□ 1.03
SREK1-212ENST00000522912 DDX19BQ9UMR2 479 aa21.5■■□□□ 1.03
SREK1-212ENST00000522912 CRYBG1Q9Y4K1 1723 aa21.5■■□□□ 1.03
SREK1-212ENST00000522912 SPATA31A3Q5VYP0 1347 aa21.5■■□□□ 1.03
SREK1-212ENST00000522912 TSPYL4Q9UJ04 414 aa21.5■■□□□ 1.03
SREK1-212ENST00000522912 CABLES1Q8TDN4 633 aa21.48■■□□□ 1.03
SREK1-212ENST00000522912 COL18A1P39060 1754 aa21.48■■□□□ 1.03
SREK1-212ENST00000522912 SLAIN2Q9P270 581 aa21.47■■□□□ 1.03
SREK1-212ENST00000522912 LMO7Q8WWI1 1683 aa21.46■■□□□ 1.03
SREK1-212ENST00000522912 HAP1P54257 671 aaPredicted RBP21.45■■□□□ 1.02
SREK1-212ENST00000522912 ERBB3P21860 1342 aa21.45■■□□□ 1.02
SREK1-212ENST00000522912 ZBTB40Q9NUA8 1239 aa21.45■■□□□ 1.02
SREK1-212ENST00000522912 ABCC4O15439 1325 aa21.44■■□□□ 1.02
SREK1-212ENST00000522912 CEMIPQ8WUJ3 1361 aa21.43■■□□□ 1.02
SREK1-212ENST00000522912 PDE4AP27815 886 aa21.43■■□□□ 1.02
SREK1-212ENST00000522912 TAF7Q15545 349 aaPredicted RBP21.43■■□□□ 1.02
SREK1-212ENST00000522912 PLEKHO1Q53GL0 409 aaPredicted RBP21.43■■□□□ 1.02
SREK1-212ENST00000522912 RWDD1Q9H446 243 aaPredicted RBP21.43■■□□□ 1.02
SREK1-212ENST00000522912 VIRMAQ69YN4 1812 aaKnown RBP21.42■■□□□ 1.02
SREK1-212ENST00000522912 LGR6Q9HBX8 967 aa21.42■■□□□ 1.02
SREK1-212ENST00000522912 ZNF530Q6P9A1 599 aaPredicted RBP21.41■■□□□ 1.02
SREK1-212ENST00000522912 API5Q9BZZ5 524 aaKnown RBP21.41■■□□□ 1.02
SREK1-212ENST00000522912 AMOTQ4VCS5 1084 aa21.41■■□□□ 1.02
SREK1-212ENST00000522912 BACH2Q9BYV9 841 aa21.41■■□□□ 1.02
SREK1-212ENST00000522912 BABAM1Q9NWV8 329 aa21.41■■□□□ 1.02
SREK1-212ENST00000522912 SOS2Q07890 1332 aaPredicted RBP21.41■■□□□ 1.02
SREK1-212ENST00000522912 RGS3P49796 1198 aa21.4■■□□□ 1.02
SREK1-212ENST00000522912 AKAP4Q5JQC9 854 aa21.4■■□□□ 1.02
SREK1-212ENST00000522912 ZBTB7BO15156 539 aaPredicted RBP21.39■■□□□ 1.02
SREK1-212ENST00000522912 CHRNA2Q15822 529 aa21.39■■□□□ 1.02
SREK1-212ENST00000522912 RGS12O14924 1447 aa21.39■■□□□ 1.01
SREK1-212ENST00000522912 FAM208AQ9UK61 1670 aaKnown RBP21.39■■□□□ 1.01
SREK1-212ENST00000522912 ABCC6O95255 1503 aa21.39■■□□□ 1.01
SREK1-212ENST00000522912 HDAC1Q13547 482 aaPredicted RBP21.38■■□□□ 1.01
SREK1-212ENST00000522912 CPDO75976 1380 aa21.37■■□□□ 1.01
SREK1-212ENST00000522912 KDM3BQ7LBC6 1761 aa21.37■■□□□ 1.01
SREK1-212ENST00000522912 SLC4A2P04920 1241 aa21.36■■□□□ 1.01
SREK1-212ENST00000522912 NLRP2Q9NX02 1062 aa21.36■■□□□ 1.01
SREK1-212ENST00000522912 MPRIPQ6WCQ1 1025 aa21.36■■□□□ 1.01
SREK1-212ENST00000522912 PDZRN3Q9UPQ7 1066 aa21.35■■□□□ 1.01
SREK1-212ENST00000522912 NHSL1Q5SYE7 1610 aa21.35■■□□□ 1.01
SREK1-212ENST00000522912 PTPRCP08575 1304 aa21.34■■□□□ 1.01
SREK1-212ENST00000522912 RNMTO43148 476 aaKnown RBP21.34■■□□□ 1.01
SREK1-212ENST00000522912 C1orf141Q5JVX7 400 aa21.34■■□□□ 1.01
SREK1-212ENST00000522912 G2E3Q7L622 706 aa21.34■■□□□ 1.01
SREK1-212ENST00000522912 CACNA1FO60840 1977 aa21.34■■□□□ 1.01
SREK1-212ENST00000522912 INTS3Q68E01 1043 aaKnown RBP21.33■■□□□ 1.01
SREK1-212ENST00000522912 CHMP4BQ9H444 224 aaKnown RBP21.33■■□□□ 1.01
SREK1-212ENST00000522912 ABCA3Q99758 1704 aa21.32■■□□□ 1
SREK1-212ENST00000522912 SOS1Q07889 1333 aaPredicted RBP21.32■■□□□ 1
SREK1-212ENST00000522912 CSB-PGBD3P0DP91 1061 aa21.32■■□□□ 1
SREK1-212ENST00000522912 ADAMTS7Q9UKP4 1686 aa21.32■■□□□ 1
SREK1-212ENST00000522912 RAPGEF4Q8WZA2 1011 aa21.31■■□□□ 1
SREK1-212ENST00000522912 OVOS2A0A0G2JMS6 1433 aa21.31■■□□□ 1
SREK1-212ENST00000522912 TEFQ10587 303 aa21.31■■□□□ 1
SREK1-212ENST00000522912 CCDC30Q5VVM6 783 aa21.31■■□□□ 1
SREK1-212ENST00000522912 C1orf115Q9H7X2 142 aa21.31■■□□□ 1
SREK1-212ENST00000522912 SIPA1L3O60292 1781 aaPredicted RBP21.31■■□□□ 1
SREK1-212ENST00000522912 MEGF6O75095 1541 aa21.3■■□□□ 1
SREK1-212ENST00000522912 EIF4A1P60842 406 aaKnown RBP21.3■■□□□ 1
SREK1-212ENST00000522912 NECTIN2Q92692 538 aa21.3■■□□□ 1
SREK1-212ENST00000522912 KCNQ3O43525 872 aa21.29■■□□□ 1
SREK1-212ENST00000522912 SMC5Q8IY18 1101 aa21.29■■□□□ 1
SREK1-212ENST00000522912 STK31Q9BXU1 1019 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms