RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ZNF853P0CG23 659 aa20■□□□□ 0.79
CTNNA1-236ENST00000522792 ERICH6BQ5W0A0 696 aa20■□□□□ 0.79
CTNNA1-236ENST00000522792 MBIPQ9NS73 344 aa20■□□□□ 0.79
CTNNA1-236ENST00000522792 RARSP54136 660 aaKnown RBP19.99■□□□□ 0.79
CTNNA1-236ENST00000522792 CFAP44Q96MT7 982 aa19.99■□□□□ 0.79
CTNNA1-236ENST00000522792 MAP3K5Q99683 1374 aa19.98■□□□□ 0.79
CTNNA1-236ENST00000522792 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
CTNNA1-236ENST00000522792 BCL2L13Q9BXK5 485 aa19.98■□□□□ 0.79
CTNNA1-236ENST00000522792 UBAP1LF5GYI3 381 aa19.98■□□□□ 0.79
CTNNA1-236ENST00000522792 C20orf194Q5TEA3 1177 aa19.97■□□□□ 0.79
CTNNA1-236ENST00000522792 FAM208AQ9UK61 1670 aaKnown RBP19.97■□□□□ 0.79
CTNNA1-236ENST00000522792 CRB1P82279 1406 aa19.97■□□□□ 0.79
CTNNA1-236ENST00000522792 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.97■□□□□ 0.79
CTNNA1-236ENST00000522792 COL16A1Q07092 1604 aaPredicted RBP19.96■□□□□ 0.79
CTNNA1-236ENST00000522792 PLEKHO1Q53GL0 409 aaPredicted RBP19.96■□□□□ 0.79
CTNNA1-236ENST00000522792 HTATSF1O43719 755 aaKnown RBP19.95■□□□□ 0.78
CTNNA1-236ENST00000522792 ZNF530Q6P9A1 599 aaPredicted RBP19.95■□□□□ 0.78
CTNNA1-236ENST00000522792 EXOC6Q8TAG9 804 aa19.95■□□□□ 0.78
CTNNA1-236ENST00000522792 PPP4R2Q9NY27 417 aa19.95■□□□□ 0.78
CTNNA1-236ENST00000522792 COL22A1Q8NFW1 1626 aaPredicted RBP19.95■□□□□ 0.78
CTNNA1-236ENST00000522792 COL5A2P05997 1499 aaPredicted RBP19.95■□□□□ 0.78
CTNNA1-236ENST00000522792 CT47B1P0C2W7 299 aaPredicted RBP19.95■□□□□ 0.78
CTNNA1-236ENST00000522792 RAPGEF4Q8WZA2 1011 aa19.94■□□□□ 0.78
CTNNA1-236ENST00000522792 LRRC37A3O60309 1634 aa19.94■□□□□ 0.78
CTNNA1-236ENST00000522792 AMOTQ4VCS5 1084 aa19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 IL17REQ8NFR9 667 aa19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 FRAT1Q92837 279 aaPredicted RBP19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 CRBNQ96SW2 442 aa19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 MIS18AQ9NYP9 233 aa19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 CHL1O00533 1208 aa19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 CANXP27824 592 aaKnown RBP19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 TSPYL6Q8N831 410 aa19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 STRN4Q9NRL3 753 aa19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 WDR17Q8IZU2 1322 aa19.93■□□□□ 0.78
CTNNA1-236ENST00000522792 MEGF6O75095 1541 aa19.92■□□□□ 0.78
CTNNA1-236ENST00000522792 TOM1L2Q6ZVM7 507 aa19.92■□□□□ 0.78
CTNNA1-236ENST00000522792 SMC4Q9NTJ3 1288 aa19.92■□□□□ 0.78
CTNNA1-236ENST00000522792 TATP17735 454 aaPredicted RBP19.91■□□□□ 0.78
CTNNA1-236ENST00000522792 AKAP4Q5JQC9 854 aa19.91■□□□□ 0.78
CTNNA1-236ENST00000522792 C8orf58Q8NAV2 365 aa19.91■□□□□ 0.78
CTNNA1-236ENST00000522792 B4GALNT3Q6L9W6 998 aa19.9■□□□□ 0.78
CTNNA1-236ENST00000522792 SSH1Q8WYL5 1049 aa19.9■□□□□ 0.78
CTNNA1-236ENST00000522792 EVA1CP58658 441 aa19.9■□□□□ 0.78
CTNNA1-236ENST00000522792 C1orf141Q5JVX7 400 aa19.9■□□□□ 0.78
CTNNA1-236ENST00000522792 TSPYL4Q9UJ04 414 aa19.9■□□□□ 0.78
CTNNA1-236ENST00000522792 VAMP4O75379 141 aa19.89■□□□□ 0.77
CTNNA1-236ENST00000522792 KRT24Q2M2I5 525 aa19.89■□□□□ 0.77
CTNNA1-236ENST00000522792 TWISTNBQ3B726 338 aaPredicted RBP19.89■□□□□ 0.77
CTNNA1-236ENST00000522792 LGR6Q9HBX8 967 aa19.89■□□□□ 0.77
CTNNA1-236ENST00000522792 LARP1Q6PKG0 1096 aaKnown RBP19.88■□□□□ 0.77
CTNNA1-236ENST00000522792 MPRIPQ6WCQ1 1025 aa19.88■□□□□ 0.77
CTNNA1-236ENST00000522792 BTG4Q9NY30 223 aa19.88■□□□□ 0.77
CTNNA1-236ENST00000522792 CERKQ8TCT0 537 aa19.87■□□□□ 0.77
CTNNA1-236ENST00000522792 TNNQ9UQP3 1299 aa19.87■□□□□ 0.77
CTNNA1-236ENST00000522792 COL14A1Q05707 1796 aaKnown RBP19.87■□□□□ 0.77
CTNNA1-236ENST00000522792 CEMIPQ8WUJ3 1361 aa19.87■□□□□ 0.77
CTNNA1-236ENST00000522792 TCERG1O14776 1098 aaKnown RBP19.86■□□□□ 0.77
CTNNA1-236ENST00000522792 ADAMTS2O95450 1211 aa19.86■□□□□ 0.77
CTNNA1-236ENST00000522792 NUTM2BA6NNL0 878 aaPredicted RBP19.85■□□□□ 0.77
CTNNA1-236ENST00000522792 NUTM2EB1AL46 878 aaPredicted RBP19.85■□□□□ 0.77
CTNNA1-236ENST00000522792 TAF7Q15545 349 aaPredicted RBP19.85■□□□□ 0.77
CTNNA1-236ENST00000522792 NUTM2AQ8IVF1 878 aaPredicted RBP19.85■□□□□ 0.77
CTNNA1-236ENST00000522792 SPG7Q9UQ90 795 aa19.85■□□□□ 0.77
CTNNA1-236ENST00000522792 ALDH1L2Q3SY69 923 aa19.85■□□□□ 0.77
CTNNA1-236ENST00000522792 PANK1Q8TE04 598 aa19.85■□□□□ 0.77
CTNNA1-236ENST00000522792 CARD10Q9BWT7 1032 aa19.85■□□□□ 0.77
CTNNA1-236ENST00000522792 RNMTO43148 476 aaKnown RBP19.84■□□□□ 0.77
CTNNA1-236ENST00000522792 ZNF428Q96B54 188 aa19.83■□□□□ 0.77
CTNNA1-236ENST00000522792 CCDC136Q96JN2 1154 aa19.83■□□□□ 0.77
CTNNA1-236ENST00000522792 PKD1L3Q7Z443 1732 aa19.83■□□□□ 0.76
CTNNA1-236ENST00000522792 VIRMAQ69YN4 1812 aaKnown RBP19.83■□□□□ 0.76
CTNNA1-236ENST00000522792 PDE3AQ14432 1141 aa19.83■□□□□ 0.76
CTNNA1-236ENST00000522792 USP35Q9P2H5 1018 aa19.83■□□□□ 0.76
CTNNA1-236ENST00000522792 NOB1Q9ULX3 412 aaKnown RBP19.83■□□□□ 0.76
CTNNA1-236ENST00000522792 OVOS2A0A0G2JMS6 1433 aa19.82■□□□□ 0.76
CTNNA1-236ENST00000522792 TEFQ10587 303 aa19.82■□□□□ 0.76
CTNNA1-236ENST00000522792 ZKSCAN2Q63HK3 967 aa19.82■□□□□ 0.76
CTNNA1-236ENST00000522792 CLUAP1Q96AJ1 413 aa19.82■□□□□ 0.76
CTNNA1-236ENST00000522792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.82■□□□□ 0.761e-12■■□□□ 12.3
CTNNA1-236ENST00000522792 PARP4Q9UKK3 1724 aaKnown RBP19.82■□□□□ 0.76
CTNNA1-236ENST00000522792 PHKG2P15735 406 aa19.81■□□□□ 0.76
CTNNA1-236ENST00000522792 COG6Q9Y2V7 657 aa19.81■□□□□ 0.76
CTNNA1-236ENST00000522792 RLBP1P12271 317 aa19.8■□□□□ 0.76
CTNNA1-236ENST00000522792 MRPL50Q8N5N7 158 aaKnown RBP19.8■□□□□ 0.76
CTNNA1-236ENST00000522792 KIF16BQ96L93 1317 aa19.8■□□□□ 0.76
CTNNA1-236ENST00000522792 IL2RBP14784 551 aa19.8■□□□□ 0.76
CTNNA1-236ENST00000522792 IFNL2Q8IZJ0 200 aa19.8■□□□□ 0.76
CTNNA1-236ENST00000522792 PLCH1Q4KWH8 1693 aa19.79■□□□□ 0.76
CTNNA1-236ENST00000522792 KDM6AO15550 1401 aaPredicted RBP19.79■□□□□ 0.76
CTNNA1-236ENST00000522792 CYP27B1O15528 508 aa19.79■□□□□ 0.76
CTNNA1-236ENST00000522792 BABAM1Q9NWV8 329 aa19.79■□□□□ 0.76
CTNNA1-236ENST00000522792 PLEKHG2Q9H7P9 1386 aa19.79■□□□□ 0.76
CTNNA1-236ENST00000522792 ADAMTS7Q9UKP4 1686 aa19.78■□□□□ 0.76
CTNNA1-236ENST00000522792 TRIM27P14373 513 aa19.78■□□□□ 0.76
CTNNA1-236ENST00000522792 BTBD11A6QL63 1104 aa19.78■□□□□ 0.76
CTNNA1-236ENST00000522792 FTSJ3Q8IY81 847 aaKnown RBP19.78■□□□□ 0.76
CTNNA1-236ENST00000522792 ATF7IPQ6VMQ6 1270 aa19.77■□□□□ 0.76
CTNNA1-236ENST00000522792 DZIP1LQ8IYY4 767 aaKnown RBP19.77■□□□□ 0.76
CTNNA1-236ENST00000522792 ZCRB1Q8TBF4 217 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms