RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TREML4Q6UXN2 200 aa9.17□□□□□ -0.94
HMGB1P1-201ENST00000522557 CLUAP1Q96AJ1 413 aa9.17□□□□□ -0.94
HMGB1P1-201ENST00000522557 VEGFBP49765 207 aa9.16□□□□□ -0.94
HMGB1P1-201ENST00000522557 SLFNL1Q499Z3 407 aa9.16□□□□□ -0.94
HMGB1P1-201ENST00000522557 NXF1Q9UBU9 619 aaKnown RBP9.16□□□□□ -0.94
HMGB1P1-201ENST00000522557 LCE2AQ5TA79 106 aaPredicted RBP9.15□□□□□ -0.94
HMGB1P1-201ENST00000522557 RNF135Q8IUD6 432 aa9.15□□□□□ -0.94
HMGB1P1-201ENST00000522557 OSBPL3Q9H4L5 887 aa9.15□□□□□ -0.94
HMGB1P1-201ENST00000522557 POLMQ9NP87 494 aaPredicted RBP9.15□□□□□ -0.94
HMGB1P1-201ENST00000522557 POM121CA8CG34 1229 aa9.14□□□□□ -0.95
HMGB1P1-201ENST00000522557 ATP5J2-PTCD1G3V325 749 aa9.14□□□□□ -0.95
HMGB1P1-201ENST00000522557 WFS1O76024 890 aa9.14□□□□□ -0.95
HMGB1P1-201ENST00000522557 A0A1W2PRU2 124 aa9.13□□□□□ -0.95
HMGB1P1-201ENST00000522557 TRAK2O60296 914 aa9.13□□□□□ -0.95
HMGB1P1-201ENST00000522557 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
HMGB1P1-201ENST00000522557 WWC1Q8IX03 1113 aa9.13□□□□□ -0.95
HMGB1P1-201ENST00000522557 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
HMGB1P1-201ENST00000522557 ALG2Q9H553 416 aa9.13□□□□□ -0.95
HMGB1P1-201ENST00000522557 CHIC2Q9UKJ5 165 aa9.13□□□□□ -0.95
HMGB1P1-201ENST00000522557 PIK3CDO00329 1044 aa9.12□□□□□ -0.95
HMGB1P1-201ENST00000522557 SOX11P35716 441 aa9.12□□□□□ -0.95
HMGB1P1-201ENST00000522557 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.95
HMGB1P1-201ENST00000522557 ESF1Q9H501 851 aaKnown RBP9.12□□□□□ -0.95
HMGB1P1-201ENST00000522557 DOLKQ9UPQ8 538 aa9.12□□□□□ -0.95
HMGB1P1-201ENST00000522557 FOXD4L5Q5VV16 416 aaPredicted RBP9.11□□□□□ -0.95
HMGB1P1-201ENST00000522557 RNF217Q8TC41 542 aa9.11□□□□□ -0.95
HMGB1P1-201ENST00000522557 ADAMTS19Q8TE59 1207 aa9.11□□□□□ -0.95
HMGB1P1-201ENST00000522557 MEN1O00255 615 aa9.1□□□□□ -0.95
HMGB1P1-201ENST00000522557 OXLD1Q5BKU9 147 aa9.1□□□□□ -0.95
HMGB1P1-201ENST00000522557 CYP2U1Q7Z449 544 aa9.1□□□□□ -0.95
HMGB1P1-201ENST00000522557 MYCP01106 439 aaPredicted RBP9.09□□□□□ -0.95
HMGB1P1-201ENST00000522557 PTSQ03393 145 aa9.09□□□□□ -0.95
HMGB1P1-201ENST00000522557 PLPP7Q8NBV4 271 aa9.09□□□□□ -0.95
HMGB1P1-201ENST00000522557 H3BM21 787 aa9.08□□□□□ -0.96
HMGB1P1-201ENST00000522557 PPFIA3O75145 1194 aa9.08□□□□□ -0.96
HMGB1P1-201ENST00000522557 RNF144AP50876 292 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P1-201ENST00000522557 USP4Q13107 963 aa9.08□□□□□ -0.96
HMGB1P1-201ENST00000522557 HDGFL1Q5TGJ6 251 aa9.08□□□□□ -0.96
HMGB1P1-201ENST00000522557 PROSER2Q86WR7 435 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P1-201ENST00000522557 SLC16A10Q8TF71 515 aa9.08□□□□□ -0.96
HMGB1P1-201ENST00000522557 ARHGEF10LQ9HCE6 1279 aa9.08□□□□□ -0.96
HMGB1P1-201ENST00000522557 RAB6BQ9NRW1 208 aa9.08□□□□□ -0.96
HMGB1P1-201ENST00000522557 ARID3CA6NKF2 412 aa9.07□□□□□ -0.96
HMGB1P1-201ENST00000522557 STAU1O95793 577 aaKnown RBP9.07□□□□□ -0.96
HMGB1P1-201ENST00000522557 PRICKLE2Q7Z3G6 844 aa9.07□□□□□ -0.96
HMGB1P1-201ENST00000522557 NPAS3Q8IXF0 933 aa9.07□□□□□ -0.96
HMGB1P1-201ENST00000522557 ERBB4Q15303 1308 aa9.06□□□□□ -0.96
HMGB1P1-201ENST00000522557 SKIP12755 728 aa9.06□□□□□ -0.96
HMGB1P1-201ENST00000522557 MAP7D1Q3KQU3 841 aa9.06□□□□□ -0.96
HMGB1P1-201ENST00000522557 NLRP3Q96P20 1036 aa9.06□□□□□ -0.96
HMGB1P1-201ENST00000522557 GNRH1P01148 92 aa9.05□□□□□ -0.96
HMGB1P1-201ENST00000522557 IL2RAP01589 272 aa9.05□□□□□ -0.96
HMGB1P1-201ENST00000522557 CLN3Q13286 438 aa9.05□□□□□ -0.96
HMGB1P1-201ENST00000522557 LYSMD3Q7Z3D4 306 aa9.05□□□□□ -0.96
HMGB1P1-201ENST00000522557 SLC35F4A4IF30 521 aa9.04□□□□□ -0.96
HMGB1P1-201ENST00000522557 RHOQP17081 205 aa9.04□□□□□ -0.96
HMGB1P1-201ENST00000522557 CCDC155Q8N6L0 562 aa9.04□□□□□ -0.96
HMGB1P1-201ENST00000522557 CNKSR1Q969H4 720 aa9.04□□□□□ -0.96
HMGB1P1-201ENST00000522557 GRIP2Q9C0E4 1043 aa9.04□□□□□ -0.96
HMGB1P1-201ENST00000522557 SENP3-EIF4A1A0A087X0R7 540 aa9.03□□□□□ -0.96
HMGB1P1-201ENST00000522557 GPC1P35052 558 aa9.03□□□□□ -0.96
HMGB1P1-201ENST00000522557 XAGE2Q96GT9 111 aa9.03□□□□□ -0.96
HMGB1P1-201ENST00000522557 ESYT1Q9BSJ8 1104 aa9.03□□□□□ -0.96
HMGB1P1-201ENST00000522557 GMPRP36959 345 aa9.02□□□□□ -0.97
HMGB1P1-201ENST00000522557 CENPCQ03188 943 aa9.02□□□□□ -0.97
HMGB1P1-201ENST00000522557 POU4F2Q12837 409 aa9.02□□□□□ -0.97
HMGB1P1-201ENST00000522557 SLC27A3Q5K4L6 730 aa9.02□□□□□ -0.97
HMGB1P1-201ENST00000522557 DEPDC4Q8N2C3 294 aa9.02□□□□□ -0.97
HMGB1P1-201ENST00000522557 IRF7Q92985 503 aa9.02□□□□□ -0.97
HMGB1P1-201ENST00000522557 SIRT1Q96EB6 747 aa9.02□□□□□ -0.97
HMGB1P1-201ENST00000522557 UCN2Q96RP3 112 aa9.02□□□□□ -0.97
HMGB1P1-201ENST00000522557 TBC1D9Q6ZT07 1266 aa9.01□□□□□ -0.97
HMGB1P1-201ENST00000522557 CCDC82Q8N4S0 544 aa9.01□□□□□ -0.97
HMGB1P1-201ENST00000522557 ETNK1Q9HBU6 452 aa9.01□□□□□ -0.97
HMGB1P1-201ENST00000522557 HRH3Q9Y5N1 445 aa9.01□□□□□ -0.97
HMGB1P1-201ENST00000522557 NCOA4Q13772 614 aa9□□□□□ -0.97
HMGB1P1-201ENST00000522557 NFATC2IPQ8NCF5 419 aa9□□□□□ -0.97
HMGB1P1-201ENST00000522557 SCNN1DP51172 638 aa8.99□□□□□ -0.97
HMGB1P1-201ENST00000522557 EML3Q32P44 896 aa8.99□□□□□ -0.97
HMGB1P1-201ENST00000522557 GLMNQ92990 594 aa8.99□□□□□ -0.97
HMGB1P1-201ENST00000522557 PCDHGA11Q9Y5H2 935 aa8.99□□□□□ -0.97
HMGB1P1-201ENST00000522557 USP17L5A8MUK1 530 aa8.98□□□□□ -0.97
HMGB1P1-201ENST00000522557 WIPF1O43516 503 aa8.98□□□□□ -0.97
HMGB1P1-201ENST00000522557 ESCO1Q5FWF5 840 aa8.98□□□□□ -0.97
HMGB1P1-201ENST00000522557 GPR161Q8N6U8 529 aaKnown RBP8.98□□□□□ -0.97
HMGB1P1-201ENST00000522557 FHDC1Q9C0D6 1143 aaPredicted RBP8.98□□□□□ -0.97
HMGB1P1-201ENST00000522557 LZTS3O60299 673 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 VSIG8P0DPA2 414 aa8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 ITGA6P23229 1130 aa8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 GDF10P55107 478 aa8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 NBPF10Q6P3W6 841 aaKnown RBP8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 VWA5B2Q8N398 1253 aa8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 NBPF15Q8N660 670 aa8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 ZSCAN10Q96SZ4 725 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 ZNF777Q9ULD5 760 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 NOD1Q9Y239 953 aa8.97□□□□□ -0.97
HMGB1P1-201ENST00000522557 SPATA31C2B4DYI2 1134 aa8.96□□□□□ -0.98
HMGB1P1-201ENST00000522557 ATP9BO43861 1147 aa8.96□□□□□ -0.98
HMGB1P1-201ENST00000522557 INHAP05111 366 aa8.96□□□□□ -0.98
HMGB1P1-201ENST00000522557 CUEDC1Q9NWM3 386 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms